Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1157 ATGGCGCTCTCTCCATCCGTACAACTCATTCAACTTCCTCCTCAGGCACTATCCTCGTCCTCTCACCATCTTCTCATCTCTGACCTCGGCTCCGTATCGCGCTTCTTCCGATCTCAATGGCTTTCCTCTTTGGCTCCATCGCTGAACCGCAGGATGAAGTTATCTTCGAGAACGAAGTGTTTTTCTATGTCCACCGAGGAGGAGCAGTGGAGTGAATCGGAAGCGTTGGTGTCCGATGTGGACGAAGGGGGCGATCGTGAGGATGATATTGGTGTCCAGCAACAGAGTTCTGTGGTCACTGCTGCTCCTGCGCAGAGGATTTCTTCCTCATCGCCGAGTGATTATCTGTCGCTTGCGATTCGAGAGCCGGTTTATGAGGTGTTAGAGGTTAAGGCAGATGGAGCTGTATCCACTAGGAAGATTAACAGACGCCAGCTGTTGAAGTCAAGTGGGCTTCGTCCACGTGATGTCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTTCGTGAACATGCTATTTTGCTTAATCTGGGTTCGCTTCGAGCAATAGCTATGCAGGATTGTGTCCTCATATTTGATTATAACCGTCCAGGAGGACAAGCTTTTATCGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGAGTGCCAGAAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCGTTGCTTTCGCGAACACAGCGTTTGGAGCAGCGACTAATGAAAGTAGAACCTCGTGTTCAAGCTCTACTTGAGGTATTGCCCAACAAATTAACTGCTGATGTGTTGGAACAACTTCGTATTAGCAAGCAGACTTTGGTTGAATTAGGTTCCAGGGCAGGGGCTCTCAGACAAATGCTTCTTGATCTTCTGGAGGATCCACAAGAAATTCGACGTATCTGCATTATGGGAAGAAATTGCACGCTTAATAAGAGAAATGATGATGTGGAGTGCTCTCTTCCTTTGGATAAGCAGATTGCTGATGGTAAATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCTGCAAAAGAAATGGAAGATTCAATTGCCGTCAATTTGAGCTCGCGGCGACTGGAGGTTAGCAGGGTGGAATTGCTTCTCCAAGTTGGGACATTTTGTGTGGCTGTTGGTGCTTTAGTTGCAGGAATATTTGGCATGAACTTACGATCATACCTTGAAGAACACGTGTTTGCCTTCTGGTTAACAACAGCTGGGATAATTGTTGGCGCTGTTGTGGCATTTTTTCTCATGTATTCATATCTCAGAGATAGGAGAATCCTATAG 1323 46.03 MALSPSVQLIQLPPQALSSSSHHLLISDLGSVSRFFRSQWLSSLAPSLNRRMKLSSRTKCFSMSTEEEQWSESEALVSDVDEGGDREDDIGVQQQSSVVTAAPAQRISSSSPSDYLSLAIREPVYEVLEVKADGAVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDYNRPGGQAFIESLLPRLNPKNMNGVPEMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECSLPLDKQIADGKCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25627475 25672304 + Tan0001794.1 Tan08g1157 761049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1157 440 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 106 439 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
Tan08g1157 440 Gene3D - 118 201 - -
Tan08g1157 440 CDD Mrs2_Mfm1p-like 127 439 IPR039204 -
Tan08g1157 440 Gene3D Magnesium transport protein CorA, transmembrane region 204 371 - -
Tan08g1157 440 FunFam Magnesium transporter MRS2-11, chloroplastic 120 201 - -
Tan08g1157 440 Pfam Magnesium transporter MRS2-like 132 370 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1157 K16075 - csv:101219314 695.656