Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1264 ATGGGTAGTAGAACAGTGAAGATTGGTGCAGACGATATAAACAAAACGGTGAACGGGATGCCTAGCTTCGTTTCTTCGATGCCCACGACCAATAATTCCATGGGTGCAGAGGGAAGCTCTATTCCTTCATCTCGTATCTCAGACTTAAGAACACTTGAGCAAACTCTTGGATTTCACATAGAAGATGTAGACCTTACTAGAAATCCTTTGTACAATCAGATAAAGTCAAATAGTTCGGCTTTGAATAACAATATCCAGTTTGGTTCTTTAATTAAGCCACTTGCATCCACTGATGTAAATCTGCCAACTGTCATCATGGGGTCTCAAACATTGCCATTACAGAAAGAATCAAATCTAAATTTGGTTTCTACATCTAGTGGCCCTCGTGAAAACTGGGGAGAGTCTAACATGGCAGATACGAGCACCAGAACTGATACATCTACAGATGACACGGATGACAAAAGTCAAAGGCTTGACAAGGATCAAGGAAACTCACTTGCGGTATATGATTCTAACAACAAATCAAAAGAAAAAACAGCAGATCAGAAGACCTTACGAAGGCTTGCCCAAAATCGTGAAGCTGCTAGAAAAAGTCGTTTAAGGAAAAAAGCATATGTGCAGCAACTAGAGAGTAGCAGGCTGAAGCTTACTCAACTTGAGCAAGAACTCCAGCGGGCCCGTCAGCAGGGTATATTTATTTCAAGTTCTGGAGACCAAGCTCATTCAATGAGTGGAAATGGGGCCCTAGCATTTGATGTAGAATATTCACGTTGGTTAGAGGAGCATAACAGGCTGATAAATGAGCTTAGAGCTGCAGTTAATTCACATGCGGGTGACACTGAACTTCGAACTATTGTTGATAATGTGACTGCACAGTTCGACGATATTTTCAGGTTGAAAGGCATTGCAGCCAAAGCTGATGTGTTCCACATCTTGTCAGGAATGTGGAAGACACCAGCAGAGCGGTGTTTCCTGTGGATTGGTGGCTTCCGTTCATCCGAGATCCTAAAGCTTCTCGTAAACCAATTGGAGCCTTTGACTGAGCAGCAAGTAGTGGGCATCTGCAACCTGCAACAATTATCACAACAGGCAGAAGATGCTCTCTCACAAGGAATGGATGCCTTGCAGCAATCCTTGGCTGAAACGTTAGCCAGTGGCACACCTGCAACGTCGGGTCGTCTGGGAATGTGGCAAATTATATGGGTCAAATGGCCATGGCAATGGGAAAACTTGGAACTCTTGAAGGCTTCCTACGCCAGGCTGATAATCTTCGTCAACAAACACTCCAACAAATGCACCGAATATTGA 1308 43.73 MGSRTVKIGADDINKTVNGMPSFVSSMPTTNNSMGAEGSSIPSSRISDLRTLEQTLGFHIEDVDLTRNPLYNQIKSNSSALNNNIQFGSLIKPLASTDVNLPTVIMGSQTLPLQKESNLNLVSTSSGPRENWGESNMADTSTRTDTSTDDTDDKSQRLDKDQGNSLAVYDSNNKSKEKTADQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMSGNGALAFDVEYSRWLEEHNRLINELRAAVNSHAGDTELRTIVDNVTAQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFLWIGGFRSSEILKLLVNQLEPLTEQQVVGICNLQQLSQQAEDALSQGMDALQQSLAETLASGTPATSGRLGMWQIIWVKWPWQWENLELLKASYARLIIFVNKHSNKCTEY 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 41075118 41084997 + Tan0001666.1 Tan08g1264 761156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1264 435 Coils Coil 202 229 - -
Tan08g1264 435 Gene3D - 182 234 - -
Tan08g1264 435 MobiDBLite consensus disorder prediction 116 144 - -
Tan08g1264 435 SUPERFAMILY Leucine zipper domain 183 226 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan08g1264 435 ProSiteProfiles DOG1 domain profile. 248 435 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan08g1264 435 CDD bZIP_HBP1b-like 183 235 - -
Tan08g1264 435 Pfam Seed dormancy control 266 340 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan08g1264 435 PANTHER TRANSCRIPTION FACTOR TGA9 140 389 - -
Tan08g1264 435 Pfam bZIP transcription factor 182 223 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan08g1264 435 MobiDBLite consensus disorder prediction 116 185 - -
Tan08g1264 435 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan08g1264 435 FunFam BZIP family transcription factor 182 231 - -
Tan08g1264 435 SMART brlzneu 179 242 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan08g1264 435 MobiDBLite consensus disorder prediction 145 160 - -
Tan08g1264 435 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1264 Tan-Chr8:41075118 Tan11g1872 Tan-Chr11:24285573 7.60E-95 dispersed
Tan08g1264 Tan-Chr8:41075118 Tan08g1270 Tan-Chr8:41773700 3.50E-23 proximal
Tan11g1871 Tan-Chr11:24285573 Tan08g1264 Tan-Chr8:41075118 5.40E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28149 PF14144 DOG1 7.40E-30 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1264 K14431 - csv:101219149 712.99