Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g1270 | ATGGTTTCATTTATATCATTCTCACCCAAAATTGCAACTATGTTAATGCAGCTTCTCGTAAACCAATTGGAGCCTTTGACTGAGCAGCAAGTAGTGGGCATCTGCAACCTGCAACAATTATCACAACAGGCAGAAGATGCTCTCTCACAAGGAATGGATGCCTTGCAGCAATCCTTGGCTGAAACGTTAGCCAGTGGCACACCTGCAACGTCGGGGTCGTCTGGGAATGTGGCAAATTATATGGGTCAAATGGCCATGGCAATGGGAAAACTTGGAACTCTTGAAGGCTTCCTACGCCAGGCTGATAATCTTCGTCAACAAACACTCCAACAAATGCACCGAATATTGACAACCCGTCAATCGGCCCGTGCGCTTCTTGCAATAAATGACTACTTCTCCCGCCTTCGAGCCCTTAGCTCTCTCTGGCTTGCGCGGCCACGAGAGTGA | 447 | 48.32 | MVSFISFSPKIATMLMQLLVNQLEPLTEQQVVGICNLQQLSQQAEDALSQGMDALQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE | 148 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 41773700 | 41774608 | - | Tan0015716.1 | Tan08g1270 | 761162 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g1270 | 148 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 15 | 148 | - | - | |
| Tan08g1270 | 148 | ProSiteProfiles | DOG1 domain profile. | 1 | 145 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan08g1270 | Tan-Chr8:41773700 | Tan11g1871 | Tan-Chr11:24285573 | 2.10E-44 | dispersed | |
| Tan08g1264 | Tan-Chr8:41075118 | Tan08g1270 | Tan-Chr8:41773700 | 3.50E-23 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g1270 | K14431 | - | csv:101219149 | 231.491 |