Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1276 ATGGGGCTGCAAATTGTGGATCCAAATACGTGCGTCAGGGGCTGCTGCTCCAGCAAATTAATTCCTCTTCATCTTCAACCTTCCGCATTTACGCTCCTCTCCCCAATTGCCCGAGGGGCCGAGAGTACTGTGTATGAAGGGAGGTTGGATGGTAAAAGAGTTGCTGTAAAGAAGCCCGTATTGTCTACTTCTGAGGACTTGGACAAGTTTCATAAGGAGCTCCAGTTGCTATGTGAATTAGATCATCCAGGCATAGTAAAGTTGGTTGCAGCAAACGCGAAGCCACCAAACTATATGTTTTTCTTTGAATTCTATGAGTCTCCAAACCTTGCGGAGAAATTGCATGCCGAAGAATGGAGTCCAAGTATCAATCAGGTGCTCATGATCACTCTAGAGATAGCGAAGGCTTTGCAATATTTGCATAACTTGGGGATTGTACATAGGGATGTGAAACCAGCAAATGTTCTTCTTGACAAAGATTTACGTCCGTCCTTGGCTGATTTTGGTTTAGCAGTACACCGGAAATATCTGAAAGGAATATCTGCAGAAAACTGGAAGTCATCTGGCAAGCCAACAGGTGGTTTCTATAAGAAAAGCATGGTTGGGACCCTCATTTATATGGCACCTGAGATATTGAGGAAGGAAATACATACAGACTTATCAGATGTCTACAGTTTTGGCATCTTAATTAATGAGCTTTTGACTGGTGTTGTTCCGTATACTGATCTTCGTACTGAAGCACAGGCCCACACTGTACTTGAAATGAATTATACAGAGCAGCTGCTTACCGCAGCCATTGTTTCAGATGGCTTGCGGCCTGCTCTTCCTAGTGATGAGTCTGGCACACCGTCAAGGTTGTTGTCACTTATACGGAGGTGCTGGGATGCAAATCCTAAAAATAGACCATCTTTTTCTGATATAGTTATGGACTTGGGGTCAATTTGGGAGGACAGAAAGGGTTTAGAATCTGTCACCCCCATACATCCCGATTTGTGTGGTAGTTTTAGTGATGCTAATGAAAAGGATTATGGATATCGAGAAGATATTAATTGGTCAAATCAGGGTGAACAATTTTCTCGAAAGGCTTCTGATGCAAACAGGTGTGCTGTGAATGTTTGGGTTGATTCCTCAACTGATCATTTGGCATACCGCCCAATACTTTCTTGGGGATCCTTTTCCACTTGTGGGAGGAGGGAGACCATGGAGGACTCTCATTTCCTTTTGCCTCACATGTGCAATGAAGAAGACGTCCATGTCTATGGGATCTTTGATGGTCATAGAGGTGCAGCAGCTGCTGAGTTTTCAGCTCAAGCTATTCCTGGGTTCTTGCGAACATCAAGTTCCACAAGAAGTCCTGCGGATGCATTAATGGAAGCATTTGTAAAAACAGATATTGAGTTTAGAAAAGAATTTGATATTTTTCGCAAATCCAAGAAGGTTAAACAGAAAGACTGGCATCCTGGTTGCACTGCTGTTGTTGCTCTAATTGTAAGAGACAGGCTTTTTGTTGCCAATGCTGGTGATTGCAGGACGATATTGTGTCGGGATGGTGATCCCATCGTTTTAAGTAAGGATCATGTCGCCAGTTGTCCTGAGGAGAGAGAGCGTGTCGTCAGAGCTGGAGGACAGGTCAAGTGGCAAGTTGATACATGGAGGGTTGGTCCGGCTGCTCTTCAGGTCACTCGATCAATTGGCGACGATGATCTGAAGCCAGCTGTGACTGCAGAACCCGAGATTACAGAAACTGTTTTGACATCACAGGATGATTACCTGGTTATGGCTAGTGATGGACTATGGGATGCCCTCAGCAACTCTGAGGTAGTTGGTATCATCAGAGACACTGTGAAAGAACCGGGAATGTGCTCGAAGCGACTTGCAACGGAAGCTGCAGCTCGTGGCAGCAACGATAACATCACGGTAATTGTTGTATTTTTGCATCCAGTATCTACAGTAGAGAGAATTTATTGA 1968 44.41 MGLQIVDPNTCVRGCCSSKLIPLHLQPSAFTLLSPIARGAESTVYEGRLDGKRVAVKKPVLSTSEDLDKFHKELQLLCELDHPGIVKLVAANAKPPNYMFFFEFYESPNLAEKLHAEEWSPSINQVLMITLEIAKALQYLHNLGIVHRDVKPANVLLDKDLRPSLADFGLAVHRKYLKGISAENWKSSGKPTGGFYKKSMVGTLIYMAPEILRKEIHTDLSDVYSFGILINELLTGVVPYTDLRTEAQAHTVLEMNYTEQLLTAAIVSDGLRPALPSDESGTPSRLLSLIRRCWDANPKNRPSFSDIVMDLGSIWEDRKGLESVTPIHPDLCGSFSDANEKDYGYREDINWSNQGEQFSRKASDANRCAVNVWVDSSTDHLAYRPILSWGSFSTCGRRETMEDSHFLLPHMCNEEDVHVYGIFDGHRGAAAAEFSAQAIPGFLRTSSSTRSPADALMEAFVKTDIEFRKEFDIFRKSKKVKQKDWHPGCTAVVALIVRDRLFVANAGDCRTILCRDGDPIVLSKDHVASCPEERERVVRAGGQVKWQVDTWRVGPAALQVTRSIGDDDLKPAVTAEPEITETVLTSQDDYLVMASDGLWDALSNSEVVGIIRDTVKEPGMCSKRLATEAAARGSNDNITVIVVFLHPVSTVERIY 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 42487673 42522211 - Tan0017469.1 Tan08g1276 761168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1276 655 Gene3D - 378 650 IPR036457 -
Tan08g1276 655 SMART serkin_6 30 314 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1276 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1276 655 SUPERFAMILY PP2C-like 381 647 IPR036457 -
Tan08g1276 655 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 379 649 - -
Tan08g1276 655 PANTHER PROTEIN PHOSPHATASE 357 644 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan08g1276 655 Gene3D Transferase(Phosphotransferase) domain 1 16 325 - -
Tan08g1276 655 Pfam Protein phosphatase 2C 392 638 IPR001932 -
Tan08g1276 655 SMART PP2C_SIG_2 403 645 IPR001932 -
Tan08g1276 655 Pfam Protein kinase domain 33 308 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1276 655 SUPERFAMILY Protein kinase-like (PK-like) 23 329 IPR011009 -
Tan08g1276 655 SMART PP2C_4 378 643 IPR001932 -
Tan08g1276 655 CDD PP2Cc 390 645 IPR001932 -
Tan08g1276 655 ProSiteProfiles PPM-type phosphatase domain profile. 388 645 IPR001932 -
Tan08g1276 655 ProSiteProfiles Protein kinase domain profile. 30 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1276 Tan-Chr8:42487673 Tan08g1278 Tan-Chr8:42487673 0.00E+00 dispersed
Tan09g0121 Tan-Chr9:5771649 Tan08g1276 Tan-Chr8:42487673 6.00E-20 dispersed
Tan09g0122 Tan-Chr9:5771649 Tan08g1276 Tan-Chr8:42487673 6.00E-20 dispersed
Tan08g1276 Tan-Chr8:42487673 Tan08g1277 Tan-Chr8:42487673 0.00E+00 tandem
Tan06g0242 Tan-Chr6:1998953 Tan08g1276 Tan-Chr8:42487673 2.40E-15 transposed
Tan06g2803 Tan-Chr6:80128457 Tan08g1276 Tan-Chr8:42487673 5.80E-27 transposed
Tan08g0349 Tan-Chr8:3108855 Tan08g1276 Tan-Chr8:42487673 5.40E-36 transposed
Tan08g1562 Tan-Chr8:64268386 Tan08g1276 Tan-Chr8:42487673 8.20E-06 transposed
Tan02g1435 Tan-Chr2:55688458 Tan08g1276 Tan-Chr8:42487673 3.60E-13 wgd
Tan05g1796 Tan-Chr5:60628074 Tan08g1276 Tan-Chr8:42487673 4.40E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67946 PF00069 Pkinase 1.20E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1276 - - - 0.0