Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1277 ATGTTTTTCTTTGAATTCTATGAGTCTCCAAACCTTGCGGAGAAATTGCATGCCGAAGAATGGAGTCCAAGTATCAATCAGGTGCTCATGATCACTCTAGAGATAGCGAAGGCTTTGCAATATTTGCATAACTTGGGGATTGTACATAGGGATGTGAAACCAGCAAATGTTCTTCTTGACAAAGATTTACGTCCGTCCTTGGCTGATTTTGGTTTAGCAGTACACCGGAAATATCTGAAAGGAATATCTGCAGAAAACTGGAAGTCATCTGGCAAGCCAACAGGTGGTTTCTATAAGAAAAGCATGGTTGGGACCCTCATTTATATGGCACCTGAGATATTGAGGAAGGAAATACATACAGACTTATCAGATGTCTACAGTTTTGGCATCTTAATTAATGAGCTTTTGACTGGTGTTGTTCCGTATACTGATCTTCGTACTGAAGCACAGGCCCACACTGTACTTGAAATGAATTATACAGAGCAGCTGCTTACCGCAGCCATTGTTTCAGATGGCTTGCGGCCTGCTCTTCCTAGTGATGAGTCTGGCACACCGTCAAGGTTGTTGTCACTTATACGGAGGTGCTGGGATGCAAATCCTAAAAATAGACCATCTTTTTCTGATATAGTTATGGACTTGGGGTCAATTTGGGAGGACAGAAAGGGTTTAGAATCTGTCACCCCCATACATCCCGATTTGTGTGGTAGTTTTAGTGATGCTAATGAAAAGGATTATGGATATCGAGAAGATATTAATTGGTCAAATCAGGGTGAACAATTTTCTCGAAAGGCTTCTGATGCAAACAGGTGTGCTGTGAATGTTTGGGTTGATTCCTCAACTGATCATTTGGCATACCGCCCAATACTTTCTTGGGGATCCTTTTCCACTTGTGGGAGGAGGGAGACCATGGAGGACTCTCATTTCCTTTTGCCTCACATGTGCAATGAAGAAGACGTCCATGTCTATGGGATCTTTGATGGTCATAGAGGTGCAGCAGCTGCTGAGTTTTCAGCTCAAGCTATTCCTGGGTTCTTGCGAACATCAAGTTCCACAAGAAGTCCTGCGGATGCATTAATGGAAGCATTTGTAAAAACAGATATTGAGTTTAGAAAAGAATTTGATATTTTTCGCAAATCCAAGAAGGTTAAACAGAAAGACTGGCATCCTGGTTGCACTGCTGTTGTTGCTCTAATTGTAAGAGACAGGCTTTTTGTTGCCAATGCTGGTGATTGCAGGACGATATTGTGTCGGGATGGTGATCCCATCGTTTTAAGTAAGGATCATGTCGCCAGTTGTCCTGAGGAGAGAGAGCGTGTCGTCAGAGCTGGAGGACAGGTCAAGTGGCAAGTTGATACATGGAGGGTTGGTCCGGCTGCTCTTCAGGTCACTCGATCAATTGGCGACGATGATCTGAAGCCAGCTGTGACTGCAGAACCCGAGATTACAGAAACTGTTTTGACATCACAGGATGATTACCTGGTTATGGCTAGTGATGGACTATGGGATGCCCTCAGCAACTCTGAGGTAGTTGGTATCATCAGAGACACTGTGAAAGAACCGGGAATGTGCTCGAAGCGACTTGCAACGGAAGCTGCAGCTCGTGGCAGCAACGATAACATCACGGTAATTGTTGTATTTTTGCATCCAGTATCTACAGTAGAGAGAATTTATTGA 1674 43.85 MFFFEFYESPNLAEKLHAEEWSPSINQVLMITLEIAKALQYLHNLGIVHRDVKPANVLLDKDLRPSLADFGLAVHRKYLKGISAENWKSSGKPTGGFYKKSMVGTLIYMAPEILRKEIHTDLSDVYSFGILINELLTGVVPYTDLRTEAQAHTVLEMNYTEQLLTAAIVSDGLRPALPSDESGTPSRLLSLIRRCWDANPKNRPSFSDIVMDLGSIWEDRKGLESVTPIHPDLCGSFSDANEKDYGYREDINWSNQGEQFSRKASDANRCAVNVWVDSSTDHLAYRPILSWGSFSTCGRRETMEDSHFLLPHMCNEEDVHVYGIFDGHRGAAAAEFSAQAIPGFLRTSSSTRSPADALMEAFVKTDIEFRKEFDIFRKSKKVKQKDWHPGCTAVVALIVRDRLFVANAGDCRTILCRDGDPIVLSKDHVASCPEERERVVRAGGQVKWQVDTWRVGPAALQVTRSIGDDDLKPAVTAEPEITETVLTSQDDYLVMASDGLWDALSNSEVVGIIRDTVKEPGMCSKRLATEAAARGSNDNITVIVVFLHPVSTVERIY 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 42487673 42522211 - Tan0017469.2 Tan08g1277 761169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1277 557 SUPERFAMILY PP2C-like 283 549 IPR036457 -
Tan08g1277 557 Pfam Protein kinase domain 2 210 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1277 557 SMART PP2C_SIG_2 305 547 IPR001932 -
Tan08g1277 557 Gene3D - 280 552 IPR036457 -
Tan08g1277 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1277 557 Gene3D Transferase(Phosphotransferase) domain 1 1 227 - -
Tan08g1277 557 SMART PP2C_4 280 545 IPR001932 -
Tan08g1277 557 ProSiteProfiles PPM-type phosphatase domain profile. 290 547 IPR001932 -
Tan08g1277 557 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1277 557 CDD PP2Cc 292 547 IPR001932 -
Tan08g1277 557 SMART serkin_6 2 216 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1277 557 PANTHER PROTEIN PHOSPHATASE 259 546 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan08g1277 557 Pfam Protein phosphatase 2C 294 540 IPR001932 -
Tan08g1277 557 SUPERFAMILY Protein kinase-like (PK-like) 2 231 IPR011009 -
Tan08g1277 557 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 281 551 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0349 Tan-Chr8:3108855 Tan08g1277 Tan-Chr8:42487673 5.40E-36 dispersed
Tan08g1277 Tan-Chr8:42487673 Tan11g1206 Tan-Chr11:9994268 6.40E-38 dispersed
Tan08g1276 Tan-Chr8:42487673 Tan08g1277 Tan-Chr8:42487673 0.00E+00 tandem
Tan08g1277 Tan-Chr8:42487673 Tan08g1278 Tan-Chr8:42487673 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67947 PF00481 PP2C 7.00E-67 CL0238 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1277 - - - 0.0