Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1279 ATGATTCTCTCTCTCATCCCAATCTCTCTCCTCCTCCTCCTCGCCTACAACCTCTACAACCGCCTCCGGTTCAAGCTTCCCCCCGGCCCCCGCCCGCTTCCGGTTGTCGGAAACCTCTACGACGTCAAGCCGGTCCGATTCAGATGCTACGCCGAGTGGGCTCAGAAGTTTGGTCCGATCATATCGGTTTGGTTTGGATCGACGCTAAACGTCATCGTGTCGAACACAGAGCTGGCTAGGGAGGTGCTGAAGGAGCACGACCAGAGCCTCGCCGACCGGCACCGGACCCGGTCTGCGGCGAAGTTCAGCCGCGACGGGAAGGACCTTATTTGGGCCGACTATGGGCCTCACTATGTGAAGGTGAGGAAAGTCTGTACCATTGAGCTTTTCTCTCCTAAGCGACTTGAATCTCTAAGGCCGATTAGAGAAGATGAAGTTTCCGCCATGGTTGAAGATGTTTTCAACCACTGCACTAATTCTGAGAACTCTGGAAAGAGCTTGAAGCTGAGGGAGTTTCTGGGAGCAGTTTCATTCAACAACATTACAAGACTCGCATTCGGGAAGAGGTTCGTGAACTCCAATGGCGTTATGGACGAACAGGGACTTGAATTCAAGGCCATTGTCGCCAATGGCCTCAAGCTCGGCGCCTCCCTGGCCATGGCCGAGCACATTCCTTGGCTCCGCTGGATGTTCCCTCTCGAAGAAGAAGCCTTCGCCAAGCACGGCGCCCGTCGCGACCGCCTCACTCGAGCCATTATGGAAGAGCATACCAAAGCTCGCAACCAGAGCGGCAATGTCAAGAACCACTTCGTTGATGCTCTCCTCACTCTCAAAGACAAGTACGATCTCAGCGAAGACACCATCATCGGCCTCCTTTGGGATATGATCACGGCCGGCATGGACACGACAGCGATTTCAGTGGAATGGGCGATGGCAGAGATCGTAAGGAACCCTAGAGTGCAGAAGAAGGTTCAAGAGGAATTAGACAACGCAATAGGAGTAGATCGGATCATGACTGAGAACGATTTCTCAAATCTTCCATATCTCCAATGCGTCGTAAAGGAAGCAATGAGATTACATCCACCGACGCCATTGATGTTGCCGCACCGATCCAACGCCAACGTCAAGATCGGCGGCTACGACATCCCCAAGGGCTCGAACGTGCACGTGAACGTGTGGGCGGTGGCACGTGATCCCGCGGTGTGGAAGAACCCAGAGGAATTCCGGCCGGAGCGTTTCTTAGAAGAGGATGTGGACATGAAAGGGCACGATCTCCGGCTGCTTCCGTTCGGGGCAGGGCGGAGGGTGTGCCCGGGGGCTCAATTGGGGATCAATTTGGTGACCTCAATGTTGGGTCATCTTCTGCACCACTTTGAATGGACGCCGTCGGAGGGGATGAAGCCGGAGGAGATCGACATGTCGGAGAGCCCTGGACTTGTGTCGTACATGAAGACCCCAGTGAAGGCTGTAGCCACTCCCAGGCTGCCATCGGGACTGTACAAACGTGTGCCTGTGGACATGTAA 1524 54.86 MILSLIPISLLLLLAYNLYNRLRFKLPPGPRPLPVVGNLYDVKPVRFRCYAEWAQKFGPIISVWFGSTLNVIVSNTELAREVLKEHDQSLADRHRTRSAAKFSRDGKDLIWADYGPHYVKVRKVCTIELFSPKRLESLRPIREDEVSAMVEDVFNHCTNSENSGKSLKLREFLGAVSFNNITRLAFGKRFVNSNGVMDEQGLEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMEEHTKARNQSGNVKNHFVDALLTLKDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAEIVRNPRVQKKVQEELDNAIGVDRIMTENDFSNLPYLQCVVKEAMRLHPPTPLMLPHRSNANVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPEEFRPERFLEEDVDMKGHDLRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFEWTPSEGMKPEEIDMSESPGLVSYMKTPVKAVATPRLPSGLYKRVPVDM 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 42694608 42699238 - Tan0016546.1 Tan08g1279 761171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1279 507 SUPERFAMILY Cytochrome P450 27 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 CDD CYP98 57 489 - -
Tan08g1279 507 FunFam Cytochrome P450 20 498 - -
Tan08g1279 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan08g1279 507 PANTHER CYTOCHROME P450 98A9 8 501 - -
Tan08g1279 507 Pfam Cytochrome P450 27 479 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 Gene3D Cytochrome P450 20 497 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1279 507 PRINTS E-class P450 group I signature 78 99 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1279 Tan-Chr8:42694608 Tan09g2051 Tan-Chr9:71010056 4.30E-81 dispersed
Tan09g1214 Tan-Chr9:64470717 Tan08g1279 Tan-Chr8:42694608 1.30E-48 dispersed
Tan01g4847 Tan-Chr1:114203582 Tan08g1279 Tan-Chr8:42694608 4.30E-52 transposed
Tan02g2286 Tan-Chr2:91718849 Tan08g1279 Tan-Chr8:42694608 1.80E-69 transposed
Tan03g0091 Tan-Chr3:17872072 Tan08g1279 Tan-Chr8:42694608 8.60E-48 transposed
Tan04g0050 Tan-Chr4:451684 Tan08g1279 Tan-Chr8:42694608 8.00E-64 transposed
Tan05g1524 Tan-Chr5:31081177 Tan08g1279 Tan-Chr8:42694608 2.00E-41 transposed
Tan05g2343 Tan-Chr5:74875006 Tan08g1279 Tan-Chr8:42694608 1.10E-66 transposed
Tan06g1869 Tan-Chr6:48239787 Tan08g1279 Tan-Chr8:42694608 5.20E-61 transposed
Tan07g0941 Tan-Chr7:19799019 Tan08g1279 Tan-Chr8:42694608 2.90E-72 transposed
Tan03g0332 Tan-Chr3:47950415 Tan08g1279 Tan-Chr8:42694608 1.60E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1279 K09754 - csv:101217257 900.968