Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1287 ATGGGATTCATGGAATGTTTTGGGCCCTTCTTTCAAAATGCCAAGCCTTACTTCGCAGTCATCTCCCTCCAATTCGGCTACGCAGGGATGAACATCATCTCCACCGTCTCGCTCAACCGCGGTATGAGCCACTATGTCCTCGTCGTCTACCGCCATGCCTTCGCCACCGCTGTCATGGCTCCCTTTGCTCTTATTCTTGAGAGGAAAGTAAGACCCAAGATTACATTGAAGATTTTCAGTCAGATGTTTGTTTTGGCTCTTCTTGGGCCACTGATTGATCAGAACTTTTACTATGTGGGGCTGAAAATGACATCCCCAACTTTCTCCTGCGCCATAAGCAACATGCTTCCTTCAATGACATTCGTCATGGCTGTCCTTTGCAGGATGGAGAAGTTGGACTTGAGGAAAGTGAGATGTCAAGCGAAGTTGTTTGGAACAATAGTGACAGTGGTGGGAGCGATGTTGATGACATTTTACAAAGGAAGTGTCCTCAACTTCTTCTGGACCGGGCACGGCCGCCACCCGAACTCACCGTCCACAGCGGATGCAGGCGCCATCAACCACCACGATGGAGAGTTCATCAAGGGCTCCATTTTGCTCATCATTGCCACTTTGGCTTGGGCGGGGTTCTTCATTCTCCAAGTGATAACCTTGAGAAAATACACTGCTCATCTTTCTCTCACCACCATGGTTTGCTTTTTGGGAACCCTTCAGGCCATTGTTGTCACCCTCGCCATGGAACGCCGCCCCTCCGCTTGGGCCATCGGCTGGGACATGAACCTCCTCGCCGCCGCTTACGCCGGGGTTGTGGCATCTGGGGTGGCATATTATGTGCAAGGTTTGGTTATGAAGACAAAAGGGCCAGTTTTTGTTACAGCTTTTAGCCCTCTCTTGATGGTGATTGTTGCTTTCATGGGCTCTCTCATTTTGGCTGAAAAGATTTATGTTGGAGGGATAATTGGAGCAGTGCTGATAGTAATGGGGCTGTACTGTGTTTTGTGGGGGAAGTATAAGGAAAGTAAAGATAGGGAAGTTGGAGAGATTGTTGAAGCAGTGAAAGGTGGAGATCAATTGCCTGTAATAAATGAATGCAATGAAAGAGTTCAAAACAAAGAGGCTTTGGCCATTAGTATTCCACCCATGGCTTCATCTAACATGGAGAAGAAGCTTCAAGGCACTAACCAGCCAAATTAA 1194 47.99 MGFMECFGPFFQNAKPYFAVISLQFGYAGMNIISTVSLNRGMSHYVLVVYRHAFATAVMAPFALILERKVRPKITLKIFSQMFVLALLGPLIDQNFYYVGLKMTSPTFSCAISNMLPSMTFVMAVLCRMEKLDLRKVRCQAKLFGTIVTVVGAMLMTFYKGSVLNFFWTGHGRHPNSPSTADAGAINHHDGEFIKGSILLIIATLAWAGFFILQVITLRKYTAHLSLTTMVCFLGTLQAIVVTLAMERRPSAWAIGWDMNLLAAAYAGVVASGVAYYVQGLVMKTKGPVFVTAFSPLLMVIVAFMGSLILAEKIYVGGIIGAVLIVMGLYCVLWGKYKESKDREVGEIVEAVKGGDQLPVINECNERVQNKEALAISIPPMASSNMEKKLQGTNQPN 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43761805 43764580 + Tan0020976.1 Tan08g1287 761179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1287 397 PANTHER WAT1-RELATED PROTEIN 19 346 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan08g1287 397 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020(InterPro)
Tan08g1287 397 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020(InterPro)
Tan08g1287 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 337 - -
Tan08g1287 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0693 Tan-Chr8:6872296 Tan08g1287 Tan-Chr8:43761805 7.20E-62 dispersed
Tan08g1287 Tan-Chr8:43761805 Tan11g1295 Tan-Chr11:11026334 8.50E-93 dispersed
Tan08g1287 Tan-Chr8:43761805 Tan08g1288 Tan-Chr8:43761805 3.20E-148 tandem
Tan03g0522 Tan-Chr3:59590944 Tan08g1287 Tan-Chr8:43761805 3.10E-125 transposed
Tan04g0490 Tan-Chr4:4034185 Tan08g1287 Tan-Chr8:43761805 1.70E-128 transposed
Tan11g1140 Tan-Chr11:9010081 Tan08g1287 Tan-Chr8:43761805 2.70E-61 transposed
Tan08g1287 Tan-Chr8:43761805 Tan09g0053 Tan-Chr9:2617891 4.70E-59 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1287 - - - 0.0