Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1288 ATGGGATTCATGGAATGTTTTGGGCCCTTCTTTCAAAATGCCAAGCCTTACTTCGCAGTCATCTCCCTCCAATTCGGCTACGCAGGGATGAACATCATCTCCACCGTCTCGCTCAACCGCGGTATGAGCCACTATGTCCTCGTCGTCTACCGCCATGCCTTCGCCACCGCTGTCATGGCTCCCTTTGCTCTTATTCTTGAGAGGAAAGTAAGACCCAAGATTACATTGAAGATTTTCAGTCAGATGTTTGTTTTGGCTCTTCTTGGGCCACTGATTGATCAGAACTTTTACTATGTGGGGCTGAAAATGACATCCCCAACTTTCTCCTGCGCCATAAGCAACATGCTTCCTTCAATGACATTCGTCATGGCTGTCCTTTGCAGGATGGAGAAGTTGGACTTGAGGAAAGTGAGATGTCAAGCGAAGTTGTTTGGAACAATAGTGACAGTGGTGGGAGCGATGTTGATGACATTTTACAAAGGAAGTGTCCTCAACTTCTTCTGGACCGGGCACGGCCGCCACCCGAACTCACCGTCCACAGCGGATGCAGGCGCCATCAACCACCACGATGGAGAGTTCATCAAGGGCTCCATTTTGCTCATCATTGCCACTTTGGCTTGGGCGGGGTTCTTCATTCTCCAAGTGATAACCTTGAGAAAATACACTGCTCATCTTTCTCTCACCACCATGGTTTGCTTTTTGGGAACCCTTCAGGCCATTGTTGTCACCCTCGCCATGGAACGCCGCCCCTCCGCTTGGGCCATCGGCTGGGACATGAACCTCCTCGCCGCCGCTTACGCCGTAAGAATCCCTCGGTCTTCTCGGGGTGAAAAAGGAAGGGGAGGCAAAAATTTTTAG 858 50.58 MGFMECFGPFFQNAKPYFAVISLQFGYAGMNIISTVSLNRGMSHYVLVVYRHAFATAVMAPFALILERKVRPKITLKIFSQMFVLALLGPLIDQNFYYVGLKMTSPTFSCAISNMLPSMTFVMAVLCRMEKLDLRKVRCQAKLFGTIVTVVGAMLMTFYKGSVLNFFWTGHGRHPNSPSTADAGAINHHDGEFIKGSILLIIATLAWAGFFILQVITLRKYTAHLSLTTMVCFLGTLQAIVVTLAMERRPSAWAIGWDMNLLAAAYAVRIPRSSRGEKGRGGKNF 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43761805 43764580 + Tan0020976.2 Tan08g1288 761180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1288 285 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020(InterPro)
Tan08g1288 285 PANTHER WAT1-RELATED PROTEIN 19 267 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan08g1288 285 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0490 Tan-Chr4:4034185 Tan08g1288 Tan-Chr8:43761805 4.80E-96 dispersed
Tan08g1288 Tan-Chr8:43761805 Tan11g1295 Tan-Chr11:11026334 3.10E-65 dispersed
Tan08g1287 Tan-Chr8:43761805 Tan08g1288 Tan-Chr8:43761805 3.20E-148 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1288 - - - 0.0