Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1289 ATGGACATCTCAGTTACAATGCTTCTGTTCGTGACTTTTCTCTCCCTTTGCCTTTACCTTCTCTTCTTCACTTCACCAAAGAACTCACCAAACAATGAAGGTTTTAGACACTTCCCCATAGTGGGAAGCTTGCCGCTTTTCTTATTGCACCGACACCATTTTCTTGACTGGACGACGGAGGTTCTCGGCAACTGCCGTACCAACACGGCGGTCTTCCGGCGGCCGGGGCATGTCAACAACGTCATCACGACGAACCCACTTGTGGTTGAGCACATATTCAAAACCCAATTCGAAAACTACCCAAAAGGGGAATTCTTCATTTCACATTTGGAGGATTTTTTGGGGCACGGTGAAATTTGGAGGGTTCAGAGGAAAACGGCCAGTTACGAATTCAACACCAAATCGCTGAGGAATTTTGTTATGGAAAATGTTACGGTGGAGATTCAAACGAGACTGCTTCCCATTTTGGAAAAGGCTTCTGAAACGGAACTGATTTTTGATCTACAAGACGTTTTCGAGCGAATTTCGTTTGATAATGTTTGTAAATTAGCTTTCAGTTTCGACCCTGCTTGTCTCGGCGGCGACGGCACTGACGGCGCCCGGTTCATGCGCGCTTTTGATGACTCCGCCACCCTCATCTTCGGCAGATTCTTCTATGCTATTCCAAATTGGTACAAAGTGAAGAGATTTCTCAACATGGGATCAGAGAGAAGACTAAAGGAATCCATAGCCACAGTCCACAAATTTGCAAACAGCATCATACGCTCAAAAATGGAAGAGAAGAAGACAACCCATATGAAAAAAGATGAAGATTTGTTGTCCCGGTTCATGGGAGATGAGCTAAACTCACCAGAATTCCTCAGAGACATAATCGTAAGTTTCATCCTCGCCGGTCGAGACACCACATCTTCAGCTCTAACATGGTTCTTCTGGATCTTATCATTCCGACCAGACATTGAGCAGAAAATCCTCATAGAACTCAAAACGATCCGATCAAAAACCAGGAAGAGAACCGAAGAAATGTACAGCTTCGACGAACTCCGAGACATGCATTATCTAGAAGCAGCATTATCTGAGTCTCTTCGACTGTACCCACCAGTGCCAGTGGACTCAAGAGCCTGTCAAAGCAACGATATATTACCGGACGGGACGGTTGTCAAGAAGAGGTGGCTTGTGACATGCCATACATATGCAATGGGGAGGATGGAGAACATATGGGGGAAGAATTATGGGGAGTTTTTGTTGAGAAGGTGGCTAGAATTTCCGATATTTCATGCGGGGCCGAGAATGTGTTTGGGAAAGAATATGGCTTATATTCAGATGAAGTCCATAGCTGCAACTTTGATTGAAAGGTTTGAGGTTGGAATGGCAGAGAAGAAGATGACTCCAAAGTATTCGTTTTCATTGACATTGAGAATGGAGAATGGGTTGCAGGTGATGGTCAAAAAGAGAGACATGGGAGTACTCATTTGA 1473 44.74 MDISVTMLLFVTFLSLCLYLLFFTSPKNSPNNEGFRHFPIVGSLPLFLLHRHHFLDWTTEVLGNCRTNTAVFRRPGHVNNVITTNPLVVEHIFKTQFENYPKGEFFISHLEDFLGHGEIWRVQRKTASYEFNTKSLRNFVMENVTVEIQTRLLPILEKASETELIFDLQDVFERISFDNVCKLAFSFDPACLGGDGTDGARFMRAFDDSATLIFGRFFYAIPNWYKVKRFLNMGSERRLKESIATVHKFANSIIRSKMEEKKTTHMKKDEDLLSRFMGDELNSPEFLRDIIVSFILAGRDTTSSALTWFFWILSFRPDIEQKILIELKTIRSKTRKRTEEMYSFDELRDMHYLEAALSESLRLYPPVPVDSRACQSNDILPDGTVVKKRWLVTCHTYAMGRMENIWGKNYGEFLLRRWLEFPIFHAGPRMCLGKNMAYIQMKSIAATLIERFEVGMAEKKMTPKYSFSLTLRMENGLQVMVKKRDMGVLI 490
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 43808203 43818625 - Tan0019652.1 Tan08g1289 761181
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1289 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan08g1289 490 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 Pfam Cytochrome P450 37 471 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 SUPERFAMILY Cytochrome P450 32 484 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 PANTHER CYTOCHROME P450 17 477 - -
Tan08g1289 490 Gene3D Cytochrome P450 24 486 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g1289 490 CDD CYP86A 69 477 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1289 Tan-Chr8:43808203 Tan09g2367 Tan-Chr9:73398559 3.70E-98 dispersed
Tan08g1283 Tan-Chr8:43189990 Tan08g1289 Tan-Chr8:43808203 2.10E-94 proximal
Tan08g1284 Tan-Chr8:43238804 Tan08g1289 Tan-Chr8:43808203 4.60E-68 proximal
Tan08g1289 Tan-Chr8:43808203 Tan08g1292 Tan-Chr8:44393028 7.20E-219 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1289 - - - 0.0