Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g1289 | ATGGACATCTCAGTTACAATGCTTCTGTTCGTGACTTTTCTCTCCCTTTGCCTTTACCTTCTCTTCTTCACTTCACCAAAGAACTCACCAAACAATGAAGGTTTTAGACACTTCCCCATAGTGGGAAGCTTGCCGCTTTTCTTATTGCACCGACACCATTTTCTTGACTGGACGACGGAGGTTCTCGGCAACTGCCGTACCAACACGGCGGTCTTCCGGCGGCCGGGGCATGTCAACAACGTCATCACGACGAACCCACTTGTGGTTGAGCACATATTCAAAACCCAATTCGAAAACTACCCAAAAGGGGAATTCTTCATTTCACATTTGGAGGATTTTTTGGGGCACGGTGAAATTTGGAGGGTTCAGAGGAAAACGGCCAGTTACGAATTCAACACCAAATCGCTGAGGAATTTTGTTATGGAAAATGTTACGGTGGAGATTCAAACGAGACTGCTTCCCATTTTGGAAAAGGCTTCTGAAACGGAACTGATTTTTGATCTACAAGACGTTTTCGAGCGAATTTCGTTTGATAATGTTTGTAAATTAGCTTTCAGTTTCGACCCTGCTTGTCTCGGCGGCGACGGCACTGACGGCGCCCGGTTCATGCGCGCTTTTGATGACTCCGCCACCCTCATCTTCGGCAGATTCTTCTATGCTATTCCAAATTGGTACAAAGTGAAGAGATTTCTCAACATGGGATCAGAGAGAAGACTAAAGGAATCCATAGCCACAGTCCACAAATTTGCAAACAGCATCATACGCTCAAAAATGGAAGAGAAGAAGACAACCCATATGAAAAAAGATGAAGATTTGTTGTCCCGGTTCATGGGAGATGAGCTAAACTCACCAGAATTCCTCAGAGACATAATCGTAAGTTTCATCCTCGCCGGTCGAGACACCACATCTTCAGCTCTAACATGGTTCTTCTGGATCTTATCATTCCGACCAGACATTGAGCAGAAAATCCTCATAGAACTCAAAACGATCCGATCAAAAACCAGGAAGAGAACCGAAGAAATGTACAGCTTCGACGAACTCCGAGACATGCATTATCTAGAAGCAGCATTATCTGAGTCTCTTCGACTGTACCCACCAGTGCCAGTGGACTCAAGAGCCTGTCAAAGCAACGATATATTACCGGACGGGACGGTTGTCAAGAAGAGGTGGCTTGTGACATGCCATACATATGCAATGGGGAGGATGGAGAACATATGGGGGAAGAATTATGGGGAGTTTTTGTTGAGAAGGTGGCTAGAATTTCCGATATTTCATGCGGGGCCGAGAATGTGTTTGGGAAAGAATATGGCTTATATTCAGATGAAGTCCATAGCTGCAACTTTGATTGAAAGGTTTGAGGTTGGAATGGCAGAGAAGAAGATGACTCCAAAGTATTCGTTTTCATTGACATTGAGAATGGAGAATGGGTTGCAGGTGATGGTCAAAAAGAGAGACATGGGAGTACTCATTTGA | 1473 | 44.74 | MDISVTMLLFVTFLSLCLYLLFFTSPKNSPNNEGFRHFPIVGSLPLFLLHRHHFLDWTTEVLGNCRTNTAVFRRPGHVNNVITTNPLVVEHIFKTQFENYPKGEFFISHLEDFLGHGEIWRVQRKTASYEFNTKSLRNFVMENVTVEIQTRLLPILEKASETELIFDLQDVFERISFDNVCKLAFSFDPACLGGDGTDGARFMRAFDDSATLIFGRFFYAIPNWYKVKRFLNMGSERRLKESIATVHKFANSIIRSKMEEKKTTHMKKDEDLLSRFMGDELNSPEFLRDIIVSFILAGRDTTSSALTWFFWILSFRPDIEQKILIELKTIRSKTRKRTEEMYSFDELRDMHYLEAALSESLRLYPPVPVDSRACQSNDILPDGTVVKKRWLVTCHTYAMGRMENIWGKNYGEFLLRRWLEFPIFHAGPRMCLGKNMAYIQMKSIAATLIERFEVGMAEKKMTPKYSFSLTLRMENGLQVMVKKRDMGVLI | 490 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 43808203 | 43818625 | - | Tan0019652.1 | Tan08g1289 | 761181 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g1289 | 490 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 424 | 433 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan08g1289 | 490 | PRINTS | P450 superfamily signature | 422 | 431 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | PRINTS | P450 superfamily signature | 297 | 314 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | PRINTS | P450 superfamily signature | 355 | 366 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | PRINTS | P450 superfamily signature | 431 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | PRINTS | E-class P450 group I signature | 306 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | PRINTS | E-class P450 group I signature | 431 | 454 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | PRINTS | E-class P450 group I signature | 421 | 431 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | PRINTS | E-class P450 group I signature | 286 | 303 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | PRINTS | E-class P450 group I signature | 354 | 372 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | Pfam | Cytochrome P450 | 37 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | SUPERFAMILY | Cytochrome P450 | 32 | 484 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | PANTHER | CYTOCHROME P450 | 17 | 477 | - | - | |
| Tan08g1289 | 490 | Gene3D | Cytochrome P450 | 24 | 486 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1289 | 490 | CDD | CYP86A | 69 | 477 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan08g1289 | Tan-Chr8:43808203 | Tan09g2367 | Tan-Chr9:73398559 | 3.70E-98 | dispersed | |
| Tan08g1283 | Tan-Chr8:43189990 | Tan08g1289 | Tan-Chr8:43808203 | 2.10E-94 | proximal | |
| Tan08g1284 | Tan-Chr8:43238804 | Tan08g1289 | Tan-Chr8:43808203 | 4.60E-68 | proximal | |
| Tan08g1289 | Tan-Chr8:43808203 | Tan08g1292 | Tan-Chr8:44393028 | 7.20E-219 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g1289 | - | - | - | 0.0 |