Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g1292 | ATGGATATCTCTGTAACAACCCTTCTTTTCTTCACTTTTCTCTCTCTTTGCCTTTACCTTCTCCTCTCCACTCCACCAAAGACCCACGAAGGTTTCAAACACTTCCCCATAGTCGGAACCTTGCCGATCTTCTTATTAAACCGTCACCGTTTTCTTGACTGGTCGACGGAGGTTCTCAGCAGGTCCCGAACCAACACGGCGGTTTTCCGGCGACCGGGGAAGGTCCACGGCGTCATCACGGCGAACCCACATGTGGTGGAGCACATACTGAAGACCCAGTTTGAGAACTACCCGAAAGGGGAACGTTTCATTTCTCTTTTGGAGGATTTTTTGGGACGTGGAATCTTCAACTCCGACAGCGAAATCTGGAAGGTTCAGAGGAAAACGGCCAGTTATGAATTCAACACAAAATCGCTTAGGAATTTTGTTATGGAGAATGTTACGGTTGAGATTCAGACGAGGCTGTTGCCTATTTTTGGAAAGGCTTCTGAAACGGAACGGATTTTGGATCTGCAGGACGTTTTGGAACGATTTGCGTTTGATAATGTTTGTAAGTTGGCTTTTAATTTTGACCCTGCTTGTCTCGGCGGCGATGGCACTGCCGGCTCCGATTTCATGCGCGCTTTTGAGGACGCCGCCACTCTCAGCTCCGGCAGATTCATGTATGCTTTCCCAGTTTTGTACAAAGTGAAGAAATTTTTAAACATGGGATCAGAAAGAACCCTGAAGGAGTCCATAGCCACAGTTCACAAATTTGCAGAAGACATAATACGCTCAAGAATGGAAGAGAAGAAAACAAACCATATAAAAAATGACCAAGATTTATTATCCCGCTTCATGGGAGACCAACACAACTCCCCAGAATTCCTCCGAGACATAATCATAAGCTTCATCCTCGCCGGCCGAGACACAACATCCTCTGCTCTAACATGGTTCTTTTGGATCTTATCCTCCCGACAAGACATCAAACAAAAAATCCTCAACGAACTCGAAACAATCCGGTCAAGAACCGGCAAGCAAATTGGAGAAATGTACAGCTTCAACGAGCTCCGAGACATGCACTATCTACAAGCAGCACTCTCCGAGACTCTCCGACTGTACCCGCCGGTACCGGTGGACACAAAAGCCTGTCGAAACGACGACGTGTTGCCGGACGGGACGTTTATTAGGAAGAGTTGGTTTGTAACGTACCATACATATGCAATGGGAAGAATGGAGAGCATATGGGGGAAGAATTATGGTGAATTTTTGCCGGAGAGGTGGCTGGAAAATGGGATTTGTCGGACGGAGAGTCCGTTTCGGTTTCCGATATTTCACGCGGGGCCGAGGATGTGTCTGGGAAAGGACATGGCTTATATTCAGATGAAGTCCATAGCTGCGGCTGTGATGGAGATGTTTGAGTTGGAAATGGCGGAGAAGAAGAAGACTCCAAAGCATTTGTTGTCGTTGACTTTAAGGATGGAGAATGGGTTGAAGGTGTTGGTCAAAAAGAGAGATACGAGTTTTCTCATTTGA | 1515 | 46.67 | MDISVTTLLFFTFLSLCLYLLLSTPPKTHEGFKHFPIVGTLPIFLLNRHRFLDWSTEVLSRSRTNTAVFRRPGKVHGVITANPHVVEHILKTQFENYPKGERFISLLEDFLGRGIFNSDSEIWKVQRKTASYEFNTKSLRNFVMENVTVEIQTRLLPIFGKASETERILDLQDVLERFAFDNVCKLAFNFDPACLGGDGTAGSDFMRAFEDAATLSSGRFMYAFPVLYKVKKFLNMGSERTLKESIATVHKFAEDIIRSRMEEKKTNHIKNDQDLLSRFMGDQHNSPEFLRDIIISFILAGRDTTSSALTWFFWILSSRQDIKQKILNELETIRSRTGKQIGEMYSFNELRDMHYLQAALSETLRLYPPVPVDTKACRNDDVLPDGTFIRKSWFVTYHTYAMGRMESIWGKNYGEFLPERWLENGICRTESPFRFPIFHAGPRMCLGKDMAYIQMKSIAAAVMEMFELEMAEKKKTPKHLLSLTLRMENGLKVLVKKRDTSFLI | 504 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 44393028 | 44396627 | + | Tan0022786.1 | Tan08g1292 | 761184 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g1292 | 504 | Gene3D | Cytochrome P450 | 24 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | CDD | CYP86A | 66 | 491 | - | - | |
| Tan08g1292 | 504 | Pfam | Cytochrome P450 | 72 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | PANTHER | CYTOCHROME P450 | 17 | 491 | - | - | |
| Tan08g1292 | 504 | SUPERFAMILY | Cytochrome P450 | 19 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | PRINTS | E-class P450 group I signature | 289 | 306 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | PRINTS | E-class P450 group I signature | 309 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | PRINTS | P450 superfamily signature | 445 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | PRINTS | P450 superfamily signature | 300 | 317 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1292 | 504 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan07g1627 | Tan-Chr7:67732911 | Tan08g1292 | Tan-Chr8:44393028 | 2.60E-97 | dispersed | |
| Tan07g2252 | Tan-Chr7:73929957 | Tan08g1292 | Tan-Chr8:44393028 | 7.10E-116 | dispersed | |
| Tan08g1283 | Tan-Chr8:43189990 | Tan08g1292 | Tan-Chr8:44393028 | 2.10E-99 | dispersed | |
| Tan08g1284 | Tan-Chr8:43238804 | Tan08g1292 | Tan-Chr8:44393028 | 1.40E-77 | dispersed | |
| Tan08g1292 | Tan-Chr8:44393028 | Tan09g2367 | Tan-Chr9:73398559 | 1.20E-112 | dispersed | |
| Tan08g1289 | Tan-Chr8:43808203 | Tan08g1292 | Tan-Chr8:44393028 | 7.20E-219 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g1292 | - | - | - | 0.0 |