Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1334 ATGGAGATCTTACAGGCGCTCGATGCTCAGGTTCTCATCGGTTTAGCTGCGGCCCTTGTAGCCATTGTTGCTGGTGCTGTTTTCCTCTTTTCCTCCAGAAAACCCGCTTCCAGAGCCTGCTTGGATCCTGAGAACTTTAAGGAGTTTAAACTTGTTAAGCGTACAAAGCTGAGCCATAATGTGGCGAAATTCACTTTTATGCTTCCTAAGCCTGATTCAATTCTTGGTCTTCCTATTGGACAACATTTAAGTTGCAGGGGAAAGGATAGCCAAGGTGAAGAGGTTATTAAATCTTACACCCCAACTACTCTGGACTCTGATGTTGGATATTTTGAACTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCACATCATTTTCGGGAAATGCGTATTGGGGACCATCTTGCTGTAAAGGGACCAAAGGGACGTTTTAAGTATCAACCTGGACAAGTTCGTGCATTTGGAATGCTTGCTGGAGGCTCTGGCATTACACCTATGTACCAAGTTGCTCGGGCTATATTAGAGAACCCGAACGACAAGACAAAGATTCACCTTATTTACGCCAATGTTACACTTGAAGATATTCTTTTGAAGGAAGAATTGGATCTTCTTGCCAAAAGATACCCTGATCGCTTCAAGATCTACTATGTGTTGAACCAGCCTCCTGAAGTTTGGAATGGTGGCGTTGGCTTTGTGTCCAAGGAAATGATTCAAGCGCATTGCCCTGCACCTGCCTCTGACATTCAGATTCTACGGTGCGGTCCGCCACCGATGAACAAGGCCATGGCTGCCCACCTTGATGCTCTTGGATACACACCAGAAATGCAGTTCCAATTCTAA 843 45.08 MEILQALDAQVLIGLAAALVAIVAGAVFLFSSRKPASRACLDPENFKEFKLVKRTKLSHNVAKFTFMLPKPDSILGLPIGQHLSCRGKDSQGEEVIKSYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRIGDHLAVKGPKGRFKYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDKTKIHLIYANVTLEDILLKEELDLLAKRYPDRFKIYYVLNQPPEVWNGGVGFVSKEMIQAHCPAPASDIQILRCGPPPMNKAMAAHLDALGYTPEMQFQF 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 51426404 51432146 + Tan0022785.1 Tan08g1334 761226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1334 280 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 44 148 IPR017927 GO:0016491(InterPro)
Tan08g1334 280 FunFam NADH-cytochrome b5 reductase 39 138 - -
Tan08g1334 280 Pfam Oxidoreductase NAD-binding domain 157 263 IPR001433 GO:0016491(InterPro)
Tan08g1334 280 PRINTS Cytochrome B5 reductase signature 133 147 - -
Tan08g1334 280 PRINTS Cytochrome B5 reductase signature 194 205 - -
Tan08g1334 280 PRINTS Cytochrome B5 reductase signature 250 258 - -
Tan08g1334 280 PRINTS Cytochrome B5 reductase signature 97 104 - -
Tan08g1334 280 PRINTS Cytochrome B5 reductase signature 156 175 - -
Tan08g1334 280 PRINTS Cytochrome B5 reductase signature 75 86 - -
Tan08g1334 280 PANTHER NADH-CYTOCHROME B5 REDUCTASE 20 280 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Tan08g1334 280 Gene3D - 138 280 IPR039261 -
Tan08g1334 280 Gene3D Translation factors 38 137 - -
Tan08g1334 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 194 205 IPR001709 GO:0016491(InterPro)
Tan08g1334 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 156 175 IPR001709 GO:0016491(InterPro)
Tan08g1334 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 250 258 IPR001709 GO:0016491(InterPro)
Tan08g1334 280 CDD cyt_b5_reduct_like 49 280 - -
Tan08g1334 280 FunFam NADH-cytochrome b5 reductase 138 280 - -
Tan08g1334 280 SUPERFAMILY Riboflavin synthase domain-like 41 149 IPR017938 -
Tan08g1334 280 Pfam Oxidoreductase FAD-binding domain 49 147 IPR008333 -
Tan08g1334 280 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 136 276 IPR039261 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0549 Tan-Chr3:60028915 Tan08g1334 Tan-Chr8:51426404 1.70E-135 dispersed
Tan03g0550 Tan-Chr3:60028915 Tan08g1334 Tan-Chr8:51426404 1.70E-89 dispersed
Tan07g0597 Tan-Chr7:9534302 Tan08g1334 Tan-Chr8:51426404 2.70E-117 dispersed
Tan08g0221 Tan-Chr8:1993979 Tan08g1334 Tan-Chr8:51426404 2.30E-51 dispersed
Tan08g1334 Tan-Chr8:51426404 Tan08g1336 Tan-Chr8:51426404 3.40E-112 dispersed
Tan08g1334 Tan-Chr8:51426404 Tan08g1335 Tan-Chr8:51426404 2.60E-141 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1334 K00326 - csv:101212931 515.383