Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1335 ATGTGGTTTGTAACTACAGCCTGCTTGGATCCTGAGAACTTTAAGGAGTTTAAACTTGTTAAGCGTACAAAGCTGAGCCATAATGTGGCGAAATTCACTTTTATGCTTCCTAAGCCTGATTCAATTCTTGGTCTTCCTATTGGACAACATTTAAGTTGCAGGGGAAAGGATAGCCAAGGTGAAGAGGTTATTAAATCTTACACCCCAACTACTCTGGACTCTGATGTTGGATATTTTGAACTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCACATCATTTTCGGGAAATGCGTATTGGGGACCATCTTGCTGTAAAGGGACCAAAGGGACGTTTTAAGTATCAACCTGGACAAGTTCGTGCATTTGGAATGCTTGCTGGAGGCTCTGGCATTACACCTATGTACCAAGTTGCTCGGGCTATATTAGAGAACCCGAACGACAAGACAAAGATTCACCTTATTTACGCCAATGTTACACTTGAAGATATTCTTTTGAAGGAAGAATTGGATCTTCTTGCCAAAAGATACCCTGATCGCTTCAAGATCTACTATGTGTTGAACCAGCCTCCTGAAGTTTGGAATGGTGGCGTTGGCTTTGTGTCCAAGGAAATGATTCAAGCGCATTGCCCTGCACCTGCCTCTGACATTCAGATTCTACGGTGCGGTCCGCCACCGATGAACAAGGCCATGGCTGCCCACCTTGATGCTCTTGGATACACACCAGAAATGCAGTTCCAATTCTAA 747 43.78 MWFVTTACLDPENFKEFKLVKRTKLSHNVAKFTFMLPKPDSILGLPIGQHLSCRGKDSQGEEVIKSYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRIGDHLAVKGPKGRFKYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDKTKIHLIYANVTLEDILLKEELDLLAKRYPDRFKIYYVLNQPPEVWNGGVGFVSKEMIQAHCPAPASDIQILRCGPPPMNKAMAAHLDALGYTPEMQFQF 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 51426404 51432146 + Tan0022785.2 Tan08g1335 761227

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1335 248 Gene3D - 106 248 IPR039261 -
Tan08g1335 248 FunFam NADH-cytochrome b5 reductase 7 106 - -
Tan08g1335 248 Pfam Oxidoreductase NAD-binding domain 125 231 IPR001433 GO:0016491(InterPro)
Tan08g1335 248 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 218 226 IPR001709 GO:0016491(InterPro)
Tan08g1335 248 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 124 143 IPR001709 GO:0016491(InterPro)
Tan08g1335 248 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 162 173 IPR001709 GO:0016491(InterPro)
Tan08g1335 248 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 12 116 IPR017927 GO:0016491(InterPro)
Tan08g1335 248 PRINTS Cytochrome B5 reductase signature 124 143 - -
Tan08g1335 248 PRINTS Cytochrome B5 reductase signature 101 115 - -
Tan08g1335 248 PRINTS Cytochrome B5 reductase signature 162 173 - -
Tan08g1335 248 PRINTS Cytochrome B5 reductase signature 43 54 - -
Tan08g1335 248 PRINTS Cytochrome B5 reductase signature 65 72 - -
Tan08g1335 248 PRINTS Cytochrome B5 reductase signature 218 226 - -
Tan08g1335 248 FunFam NADH-cytochrome b5 reductase 106 248 - -
Tan08g1335 248 SUPERFAMILY Riboflavin synthase domain-like 8 117 IPR017938 -
Tan08g1335 248 Pfam Oxidoreductase FAD-binding domain 17 115 IPR008333 -
Tan08g1335 248 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 104 244 IPR039261 -
Tan08g1335 248 CDD cyt_b5_reduct_like 17 248 - -
Tan08g1335 248 Gene3D Translation factors 6 105 - -
Tan08g1335 248 PANTHER NADH-CYTOCHROME B5 REDUCTASE 8 248 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1335 K00326 - - csv:101212931 460.685
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1335 Tan-Chr8:51426404 Tan08g1337 Tan-Chr8:51426404 3.00E-112 dispersed
Tan08g1334 Tan-Chr8:51426404 Tan08g1335 Tan-Chr8:51426404 2.60E-141 tandem
Tan08g1335 Tan-Chr8:51426404 Tan08g1336 Tan-Chr8:51426404 3.00E-112 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000880 3 3 2 3 3 2 4 3 2 3 3 3 4 3 3 4 3 4 4 2 3 2 2 3 2 1 1 3 5 3 86