Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1336 ATGAGCAGGGGAAAGGATAGCCAAGGTGAAGAGGTTATTAAATCTTACACCCCAACTACTCTGGACTCTGATGTTGGATATTTTGAACTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCACATCATTTTCGGGAAATGCGTATTGGGGACCATCTTGCTGTAAAGGGACCAAAGGGACGTTTTAAGTATCAACCTGGACAAGTTCGTGCATTTGGAATGCTTGCTGGAGGCTCTGGCATTACACCTATGTACCAAGTTGCTCGGGCTATATTAGAGAACCCGAACGACAAGACAAAGATTCACCTTATTTACGCCAATGTTACACTTGAAGATATTCTTTTGAAGGAAGAATTGGATCTTCTTGCCAAAAGATACCCTGATCGCTTCAAGATCTACTATGTGTTGAACCAGCCTCCTGAAGTTTGGAATGGTGGCGTTGGCTTTGTGTCCAAGGAAATGATTCAAGCGCATTGCCCTGCACCTGCCTCTGACATTCAGATTCTACGGTGCGGTCCGCCACCGATGAACAAGGCCATGGCTGCCCACCTTGATGCTCTTGGATACACACCAGAAATGCAGTTCCAATTCTAA 594 45.12 MSRGKDSQGEEVIKSYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRIGDHLAVKGPKGRFKYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDKTKIHLIYANVTLEDILLKEELDLLAKRYPDRFKIYYVLNQPPEVWNGGVGFVSKEMIQAHCPAPASDIQILRCGPPPMNKAMAAHLDALGYTPEMQFQF 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 51426404 51432146 + Tan0022785.3 Tan08g1336 761228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1336 197 FunFam NADH-cytochrome b5 reductase 55 197 - -
Tan08g1336 197 PANTHER NADH-CYTOCHROME B5 REDUCTASE 3 197 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Tan08g1336 197 Gene3D Translation factors 1 54 - -
Tan08g1336 197 Pfam Oxidoreductase FAD-binding domain 7 64 IPR008333 -
Tan08g1336 197 Pfam Oxidoreductase NAD-binding domain 74 180 IPR001433 GO:0016491(InterPro)
Tan08g1336 197 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 53 193 IPR039261 -
Tan08g1336 197 Gene3D - 55 197 IPR039261 -
Tan08g1336 197 CDD cyt_b5_reduct_like 7 197 - -
Tan08g1336 197 PRINTS Cytochrome B5 reductase signature 73 92 - -
Tan08g1336 197 PRINTS Cytochrome B5 reductase signature 50 64 - -
Tan08g1336 197 PRINTS Cytochrome B5 reductase signature 111 122 - -
Tan08g1336 197 PRINTS Cytochrome B5 reductase signature 14 21 - -
Tan08g1336 197 PRINTS Cytochrome B5 reductase signature 167 175 - -
Tan08g1336 197 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 111 122 IPR001709 GO:0016491(InterPro)
Tan08g1336 197 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 167 175 IPR001709 GO:0016491(InterPro)
Tan08g1336 197 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 73 92 IPR001709 GO:0016491(InterPro)
Tan08g1336 197 SUPERFAMILY Riboflavin synthase domain-like 8 66 IPR017938 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1334 Tan-Chr8:51426404 Tan08g1336 Tan-Chr8:51426404 3.40E-112 dispersed
Tan08g1336 Tan-Chr8:51426404 Tan11g1336 Tan-Chr11:11606775 2.80E-36 dispersed
Tan08g1335 Tan-Chr8:51426404 Tan08g1336 Tan-Chr8:51426404 3.00E-112 tandem
Tan08g1336 Tan-Chr8:51426404 Tan08g1337 Tan-Chr8:51426404 2.80E-113 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1336 K00326 - csv:101212931 370.933