Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1337 ATGAGCAGGGGAAAGGATAGCCAAGGTGAAGAGGTTATTAAATCTTACACCCCAACTACTCTGGACTCTGATGTTGGATATTTTGAACTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCACATCATTTTCGGGAAATGCGTATTGGGGACCATCTTGCTGTAAAGGGACCAAAGGGACGTTTTAAGTATCAACCTGGACAAGTTCGTGCATTTGGAATGCTTGCTGGAGGCTCTGGCATTACACCTATGTACCAAGTTGCTCGGGCTATATTAGAGAACCCGAACGACAAGACAAAGATTCACCTTATTTACGCCAATGTTACACTTGAAGATATTCTTTTGAAGGAAGAATTGGATCTTCTTGCCAAAAGATACCCTGATCGCTTCAAGATCTACTATGTGTTGAACCAGCCTCCTGAAGTTTGGAATGGTGGCGTTGGCTTTGTGTCCAAGGAAATGATTCAAGCGCATTGCCCTGCACCTGCCTCTGACATTCAGATTCTACGGTGCGGTCCGCCACCGATGAACAAGGCCATGGCTGCCCACCTTGATGCTCTTGGATACACACCAGAAATGCAGTTCCAATTCTAA 594 45.12 MSRGKDSQGEEVIKSYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRIGDHLAVKGPKGRFKYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDKTKIHLIYANVTLEDILLKEELDLLAKRYPDRFKIYYVLNQPPEVWNGGVGFVSKEMIQAHCPAPASDIQILRCGPPPMNKAMAAHLDALGYTPEMQFQF 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 51426404 51432146 + Tan0022785.4 Tan08g1337 761229

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1337 197 FunFam NADH-cytochrome b5 reductase 55 197 - -
Tan08g1337 197 PANTHER NADH-CYTOCHROME B5 REDUCTASE 3 197 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Tan08g1337 197 Gene3D Translation factors 1 54 - -
Tan08g1337 197 Pfam Oxidoreductase FAD-binding domain 7 64 IPR008333 -
Tan08g1337 197 Pfam Oxidoreductase NAD-binding domain 74 180 IPR001433 GO:0016491(InterPro)
Tan08g1337 197 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 53 193 IPR039261 -
Tan08g1337 197 Gene3D - 55 197 IPR039261 -
Tan08g1337 197 CDD cyt_b5_reduct_like 7 197 - -
Tan08g1337 197 PRINTS Cytochrome B5 reductase signature 73 92 - -
Tan08g1337 197 PRINTS Cytochrome B5 reductase signature 50 64 - -
Tan08g1337 197 PRINTS Cytochrome B5 reductase signature 111 122 - -
Tan08g1337 197 PRINTS Cytochrome B5 reductase signature 14 21 - -
Tan08g1337 197 PRINTS Cytochrome B5 reductase signature 167 175 - -
Tan08g1337 197 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 111 122 IPR001709 GO:0016491(InterPro)
Tan08g1337 197 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 167 175 IPR001709 GO:0016491(InterPro)
Tan08g1337 197 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 73 92 IPR001709 GO:0016491(InterPro)
Tan08g1337 197 SUPERFAMILY Riboflavin synthase domain-like 8 66 IPR017938 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1337 K00326 - - csv:101212931 370.933
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1335 Tan-Chr8:51426404 Tan08g1337 Tan-Chr8:51426404 3.00E-112 dispersed
Tan08g1337 Tan-Chr8:51426404 Tan11g1336 Tan-Chr11:11606775 2.80E-36 dispersed
Tan08g1336 Tan-Chr8:51426404 Tan08g1337 Tan-Chr8:51426404 2.80E-113 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2