Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1414 ATGGAAAATCTTGGCGATGACCCAAATAGTCCAAATCACAGCTCCGAGAGGACGGAGCCGGTGAGATCACGGTGGACGCCGAAGCCGGAGCAGATTCTGATTTTGGAGTCCATTTTCAACAGTGGAATGGTTAATCCTCCCAAGGATGAGACTGTTAGAATTAGAAAGTTGCTTGAGAAATTTGGCTCTGTTGGGGATGCCAATGTTTTCTACTGGTTTCAGAACCGCCGCTCTCGGTCTCGCCGCCGCCAGCGCCAGCTGCAGGCGGCAGCAAGTCACCAGGGTGGCGGCGGTACTGCAATTTATTATGACGGTGGTGGTGGCAGCGGCGGCAGTAGTAGTAGTGGTGTTATGAATTTCGCTGCTTCCTCTTCTTACCTTGGAGGAGGAGGGTCTTCCTCCTCAGCTTCTGGGGTTGGAGGAGATGGTGATGGCGGTGGCGGTGGCGATTTTTCGATGTCAGGTCATATGGGTTTCTCTGAAGTTGATCAACAGATGGTTGTAACCCCGTCGTTTTGCGCTTCGGAAACCTCAAGCTTAGAGTTCCAATCAGGTTATATTATAATATTCATAAATGGAGTTCCAACAGAAGTTCCAAAAGGACCATTGGACATGAAGGCAATGTTTGGGCAAGAGACAGTGTTGGTTCATTCATCAGGACTCCCAGTTCTTACCAATGAATTTGGAATCTCACTGCACAGTTTGCAGCATGGTGAAAGCTATTTTCTGTTATTAGATTACGTGGGTTCCATTTCAAAACCAATTGGCAATGAGAGAAGTAGTCCATATGTCTTATAA 798 47.74 MENLGDDPNSPNHSSERTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAASHQGGGGTAIYYDGGGGSGGSSSSGVMNFAASSSYLGGGGSSSSASGVGGDGDGGGGGDFSMSGHMGFSEVDQQMVVTPSFCASETSSLEFQSGYIIIFINGVPTEVPKGPLDMKAMFGQETVLVHSSGLPVLTNEFGISLHSLQHGESYFLLLDYVGSISKPIGNERSSPYVL 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 57523258 57525038 - Tan0002601.1 Tan08g1414 761306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1414 265 Gene3D - 22 89 - -
Tan08g1414 265 ProSiteProfiles 'Homeobox' domain profile. 18 83 IPR001356 GO:0003677(InterPro)
Tan08g1414 265 PANTHER WUSCHEL-RELATED HOMEOBOX 11 8 244 IPR044558 GO:0003700(InterPro)|GO:0048830(InterPro)
Tan08g1414 265 MobiDBLite consensus disorder prediction 1 26 - -
Tan08g1414 265 SUPERFAMILY Homeodomain-like 16 90 IPR009057 -
Tan08g1414 265 MobiDBLite consensus disorder prediction 1 16 - -
Tan08g1414 265 MobiDBLite consensus disorder prediction 132 154 - -
Tan08g1414 265 FunFam WUSCHEL-related homeobox 11 22 89 - -
Tan08g1414 265 SMART HOX_1 20 87 IPR001356 GO:0003677(InterPro)
Tan08g1414 265 Pfam Homeodomain 22 82 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2537 Tan-Chr3:78633749 Tan08g1414 Tan-Chr8:57523258 2.10E-24 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28160 PF00046 Homeodomain 7.00E-13 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1414 - - - 0.0