Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g1414 | ATGGAAAATCTTGGCGATGACCCAAATAGTCCAAATCACAGCTCCGAGAGGACGGAGCCGGTGAGATCACGGTGGACGCCGAAGCCGGAGCAGATTCTGATTTTGGAGTCCATTTTCAACAGTGGAATGGTTAATCCTCCCAAGGATGAGACTGTTAGAATTAGAAAGTTGCTTGAGAAATTTGGCTCTGTTGGGGATGCCAATGTTTTCTACTGGTTTCAGAACCGCCGCTCTCGGTCTCGCCGCCGCCAGCGCCAGCTGCAGGCGGCAGCAAGTCACCAGGGTGGCGGCGGTACTGCAATTTATTATGACGGTGGTGGTGGCAGCGGCGGCAGTAGTAGTAGTGGTGTTATGAATTTCGCTGCTTCCTCTTCTTACCTTGGAGGAGGAGGGTCTTCCTCCTCAGCTTCTGGGGTTGGAGGAGATGGTGATGGCGGTGGCGGTGGCGATTTTTCGATGTCAGGTCATATGGGTTTCTCTGAAGTTGATCAACAGATGGTTGTAACCCCGTCGTTTTGCGCTTCGGAAACCTCAAGCTTAGAGTTCCAATCAGGTTATATTATAATATTCATAAATGGAGTTCCAACAGAAGTTCCAAAAGGACCATTGGACATGAAGGCAATGTTTGGGCAAGAGACAGTGTTGGTTCATTCATCAGGACTCCCAGTTCTTACCAATGAATTTGGAATCTCACTGCACAGTTTGCAGCATGGTGAAAGCTATTTTCTGTTATTAGATTACGTGGGTTCCATTTCAAAACCAATTGGCAATGAGAGAAGTAGTCCATATGTCTTATAA | 798 | 47.74 | MENLGDDPNSPNHSSERTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAASHQGGGGTAIYYDGGGGSGGSSSSGVMNFAASSSYLGGGGSSSSASGVGGDGDGGGGGDFSMSGHMGFSEVDQQMVVTPSFCASETSSLEFQSGYIIIFINGVPTEVPKGPLDMKAMFGQETVLVHSSGLPVLTNEFGISLHSLQHGESYFLLLDYVGSISKPIGNERSSPYVL | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 57523258 | 57525038 | - | Tan0002601.1 | Tan08g1414 | 761306 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g1414 | 265 | Gene3D | - | 22 | 89 | - | - | |
Tan08g1414 | 265 | ProSiteProfiles | 'Homeobox' domain profile. | 18 | 83 | IPR001356 | GO:0003677(InterPro) | |
Tan08g1414 | 265 | PANTHER | WUSCHEL-RELATED HOMEOBOX 11 | 8 | 244 | IPR044558 | GO:0003700(InterPro)|GO:0048830(InterPro) | |
Tan08g1414 | 265 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Tan08g1414 | 265 | SUPERFAMILY | Homeodomain-like | 16 | 90 | IPR009057 | - | |
Tan08g1414 | 265 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Tan08g1414 | 265 | MobiDBLite | consensus disorder prediction | 132 | 154 | - | - | |
Tan08g1414 | 265 | FunFam | WUSCHEL-related homeobox 11 | 22 | 89 | - | - | |
Tan08g1414 | 265 | SMART | HOX_1 | 20 | 87 | IPR001356 | GO:0003677(InterPro) | |
Tan08g1414 | 265 | Pfam | Homeodomain | 22 | 82 | IPR001356 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g2537 | Tan-Chr3:78633749 | Tan08g1414 | Tan-Chr8:57523258 | 2.10E-24 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28160 | PF00046 | Homeodomain | 7.00E-13 | CL0123 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g1414 | - | - | - | 0.0 |