Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g1420 | ATGAATAACTTGACTGTTGAAACAGAAGATGCCTTTTCCAGTTTGCTCGAGCTTGCTGCAAATGATGCCATCGATGCCTTTAAGAGATCGATTGAGCGTGACCCTTCTGGTATTGATGAGATTGGTTTGTGGTATGGCCGATTGCGAGGTTCGAAGCAGATGACTAATGAGCAGAGAACTCCTTTAATGGTTGCTGCTACTTATGGTAGCATTGAGGTTCTGAAGCTTATTCTTTCTCTTTCTTGTGCTGATGTAAACCGCGCTGTCGGTCTTGACCGAAGCACTGCCCTTCATTGTGCAGCCTCAGGTGGGGCTGCAAATGCTGTAGAAATTGTGAAGCGGCTCTTAGCTGCTGGCGCTGATCCTAATATGGTTGATGGGAATGGACATCGACCCGTCGATGTGATTGTTGCCCCCCTAAGGCATGCTGAGTTTAAATCAATCCTTACGGAACTTCTTAGAACAAATGGTTTGTCTGGTGAAGGAAATCTTGATGTTTTAACAGGTGCTAGAAATTCGCATTCTCCTCGCCCTTCGTCTCCTCTGAATGTCCCCTCATCTGCATCGGAGTTAGTTTCTTCTCCAACAAAGTCGAAACTAAATGATTTTCCTATGTATTCTGCATCTGAGAAGAAAGAATATCCTGTTGATCTTTCTCTTCCAGACATCAAGAACAGTATCTACTCAACTGATGAATTCCGAATGTATTCTTTCAAGGTTCGACCCTGCTCACGGGCTTACTCTCATGATTGGACTGAGTGTCCCTTTGTCCACCCTGGAGAAAATGCTAGGAGGAGGGATCCAAGAAAGTTTCATTATAGCTGTGTACCCTGTCCTGATTTTCGGAAGGGCGCTTGCAGAAGGGGAGATATGTGTGAATATGCTCATGGGGTGTTCGAGTGCTGGCTTCACCCAGCACAATATCGGACCCGCCTTTGCAAAGATGGCACAAATTGCTCAAGGAGAGTCTGCTTCTTTGCACACATGACTGAGGAACTGCGACCACTGTATGTTTCGACTGGCTCTGCTGTTCCCTCACCGCGTTCTTGTGCTTCTGGGGCTTCTGCTATGGATTATAATACAGTCATGAACCTTCTACCTGGTTCTCCATCTTCAGTCCCTGTGATGTCTCCATCACCGTTTACTCCTCCGATGTCTCCCTCTGCCAATGGCATGTCTCACTCGTCCGTGGCTTGGCCTCAACCAAATGTACCTGCCTTGCATCTTCCAGGAAGCAATATTCAATCCAGCCGCCTAAGATCTTCTTTGAGTGCAAGAGACATTCCAGTAGAGGACTTTGATTATCTGAGCGATTTTGATTTGCAACAACAGCAGCTCCTTAATGACTTGAATTGTCTTTCTCAGCCACCATTAAGTTCAAATTCATTGAGCCGTTCTGGTCGCCTGAAAACTCTGACCCCTTCGAATCTCGATGATCTCTTCTCTGCTGAGAGTTCGTCTCCCAGATACTCTGATCAAGCTTTGGCTTCAGCTGTTTTCTCCCCTACACACAAATCTGCTGTTATCAATCAATTTCAGCAGCAACAGAATATGTTGTCACCAATCAATACAAATTTCTCTCCTAAAAATGTTGATCACCCTCTATTGCAGGCCTCTTTTGGGGTTCCATCATCTGGGAGGATGTCTCCACGAAATCTGGAACCAATCTCTCCGATGGGCTCTCGCTTGTCCATGTTAGCTCAAAGAGAGAAACAGCAACAGTTTCGCAGCCTCAGCTCGCGTGAACTTGGTGCCAATTCTGCTTCTGTTGTCAGTTCCCCTGCAAGTTCTTGGTCTAAATGGGGTCCTTCTAATGGAAGACCTGATTGGGCAGTCAATGCAGATGAAATAGGTAAACTTCGGCGATCATCATCATTTGAGCTCGGGAACAATGGAGAAGAGCCAGATTTATCATGGGTTCAATCACTTGTAAAAGAATCTCCAACTGAGATAAAAGAAAAGCAGGCTCATCCCAACTCGGGAGGGGATAGTTTTGTATCTTCTGGTGAGAGTTCTAACATGAACTCCCAAATGGAGTCAGTTGATCATGCTGCATTAGGAGCATGGCTTGAACAAATGCAGCTCGATCATCTTGTCGCTCAACAAAACTGA | 2112 | 45.74 | MNNLTVETEDAFSSLLELAANDAIDAFKRSIERDPSGIDEIGLWYGRLRGSKQMTNEQRTPLMVAATYGSIEVLKLILSLSCADVNRAVGLDRSTALHCAASGGAANAVEIVKRLLAAGADPNMVDGNGHRPVDVIVAPLRHAEFKSILTELLRTNGLSGEGNLDVLTGARNSHSPRPSSPLNVPSSASELVSSPTKSKLNDFPMYSASEKKEYPVDLSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCSRRVCFFAHMTEELRPLYVSTGSAVPSPRSCASGASAMDYNTVMNLLPGSPSSVPVMSPSPFTPPMSPSANGMSHSSVAWPQPNVPALHLPGSNIQSSRLRSSLSARDIPVEDFDYLSDFDLQQQQLLNDLNCLSQPPLSSNSLSRSGRLKTLTPSNLDDLFSAESSSPRYSDQALASAVFSPTHKSAVINQFQQQQNMLSPINTNFSPKNVDHPLLQASFGVPSSGRMSPRNLEPISPMGSRLSMLAQREKQQQFRSLSSRELGANSASVVSSPASSWSKWGPSNGRPDWAVNADEIGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKQAHPNSGGDSFVSSGESSNMNSQMESVDHAALGAWLEQMQLDHLVAQQN | 703 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 58019450 | 58023961 | + | Tan0004005.1 | Tan08g1420 | 761312 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g1420 | 703 | ProSiteProfiles | Ankyrin repeat region circular profile. | 92 | 126 | - | - | |
Tan08g1420 | 703 | MobiDBLite | consensus disorder prediction | 166 | 196 | - | - | |
Tan08g1420 | 703 | SMART | ANK_2a | 57 | 87 | IPR002110 | GO:0005515(InterPro) | |
Tan08g1420 | 703 | SMART | ANK_2a | 92 | 124 | IPR002110 | GO:0005515(InterPro) | |
Tan08g1420 | 703 | SUPERFAMILY | Ankyrin repeat | 6 | 138 | IPR036770 | - | |
Tan08g1420 | 703 | Pfam | Ankyrin repeats (3 copies) | 54 | 126 | IPR002110 | GO:0005515(InterPro) | |
Tan08g1420 | 703 | SMART | c3hfinal6 | 307 | 330 | IPR000571 | GO:0046872(InterPro) | |
Tan08g1420 | 703 | SMART | c3hfinal6 | 272 | 298 | IPR000571 | GO:0046872(InterPro) | |
Tan08g1420 | 703 | ProSiteProfiles | Zinc finger C3H1-type profile. | 277 | 299 | IPR000571 | GO:0046872(InterPro) | |
Tan08g1420 | 703 | PANTHER | UNKEMPT FAMILY MEMBER | 51 | 648 | IPR045234 | - | |
Tan08g1420 | 703 | Gene3D | - | 8 | 157 | IPR036770 | - | |
Tan08g1420 | 703 | Gene3D | - | 274 | 335 | - | - | |
Tan08g1420 | 703 | FunFam | Zinc finger CCCH domain-containing protein 66 | 230 | 298 | - | - | |
Tan08g1420 | 703 | MobiDBLite | consensus disorder prediction | 164 | 196 | - | - | |
Tan08g1420 | 703 | MobiDBLite | consensus disorder prediction | 660 | 679 | - | - | |
Tan08g1420 | 703 | MobiDBLite | consensus disorder prediction | 647 | 679 | - | - | |
Tan08g1420 | 703 | ProSiteProfiles | Ankyrin repeat profile. | 92 | 127 | IPR002110 | GO:0005515(InterPro) | |
Tan08g1420 | 703 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 276 | 297 | IPR000571 | GO:0046872(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g2421 | Tan-Chr4:83011691 | Tan08g1420 | Tan-Chr8:58019450 | 2.30E-250 | dispersed | |
Tan05g0488 | Tan-Chr5:3363608 | Tan08g1420 | Tan-Chr8:58019450 | 1.30E-133 | dispersed | |
Tan08g0088 | Tan-Chr8:805672 | Tan08g1420 | Tan-Chr8:58019450 | 1.50E-52 | dispersed | |
Tan08g1420 | Tan-Chr8:58019450 | Tan09g1181 | Tan-Chr9:64142276 | 1.40E-50 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28161 | PF12796 | Ank_2 | 3.10E-09 | CL0465 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g1420 | - | - | - | 0.0 |