Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1474 ATGCTCCAAAAGCGTCTGTTTACGTATCTTAGTGTCGTTTTCTATTCGACGATTCTCACTTCGCTTGCTCGGGCGTTCACTGACCCTGCGGATGTTGCAGCTCTTCTGGATCTGTACAGTGCTTTGAACTACCCACCAGAGCTTATAGGATGGAGAAAAGAAGGTGGAGATCCTTGTGTGGAATCATGGACTGGAGTATCTTGCTCCGGATCATCTGTAATATACCTTAAAATCCGCGGACTAAACCTCACTGGGAATCTTGGAGGGCAGCTCAACAACCTCAACAATTTGAAACAACTGGATGTTAGCTCTAATAGACTTACGGGTGAGATTCCCAATAACTTGCCTCCTAATGCTACTCATATAAATATGGCATTCAACCATTTAAGCCAAAATATTCCACATACTTTACCTTACATGGGAAATCTCCGACATTTAAATCTGAGCCATAATACTCTATCTGGTGTGATTGGAAATGTGTTCACTGGTTTACAGAATTTGAGAGAGATGGATTTGTCATATAATGACTTCACTGGAGATTTGCCAAGTTCATTCGGTTCCCTGACAAACATCACTAGGCTGTTCTTGCAGAACAACAAATTTACTGGATCAGTTGCCTACTTGTCTCACCTTCCATTAATTGACTTGAACATCCAAGACAATTCTTTTAGTGGCATTATTCCAGACAATTTTAGAACTATTCCAAATTTGTGGATTGGGGGAAATAGGTTTCGTGCAGAAGTCAATTCTCCACCCTGGGACTTCCCCCTGGAAAAAGCACCTGTGGTGCAAAACATCAGTGGTCCCCCAACAACCCAGTCAAATGCTATCCAGAATTATCCCTCTCGTGGTGTAGTCAGGCATCAGAAGAAAAGGCTTGGTCCTGGTGGAATAGTTCTCCTGGTTGGCGGGTTAACGCTAGTTGTAACCTTTGCAACTTTCTTTGTCGTATTCGCCATGAAGAAAGTGCATGAAAAGAAAATAAATTTGAAGATTAGCCATATGTTACCCCATTTTCTTCCTCTGGATGGAGCTGAAGCTGGTTCGTCTATTGCACCAGAAGCAAGCACACGGAGCTTGCCCCTGAGTTCTCTACTCATGGGTGGTCCAAGGCCTATACCTCTATTAAATCACACAAGAACCGAGAAAGCTTCTGGAAGACAAGGTTTCTCAAAGAGATGCAAGCTTCCAGTGAGAACAAAAATATACACTCTGGCAGAGCTTCAATCCACCACAAACAACTTTAGTCAAGAGAATCTTCTTGGAGAGGGATCTCTCGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCTGTGAAAAACATCAATATGGGAGCGCTCTCTTTCACAGAAGAACAGCAATTTCTGGATGTGGTATGGACTGCTTCCCGTTTGAGGCACCCGAACATTGTTACGCTTCTTGGGTATTGTGTAGAGCATGGACAACATTTACTCGGATATGAATATGTTCGAAATCTGTCTCTTGATGACGCTTTACACTGTGAAGCTTTCAGGCCTCTGTCATGGACTGTCCGTCTCCAGATTTCTCTTGGAGTTGCTAGGGCTTTAGATTATTTGCATTCAAGTTTTTTCCCGCCATTTGCTCACTGCAATGTGAAGGCTGCCAACATCTTACTTGATGAAGAACTAATGCCTCATATTTGTGATTGTGGGATGTCTGTTTTGAGACCACTTGTGACCAATAGAGTTAAAACGAAGGCTTCTGAGATTGCCAGTGGTGACAGAGGCTATCTTGCACCTGAACATGGCCAGCCAGGATTTGATAATACCAGAAGTGACGTGTATTCTTTTGGAGTGTTGCTTTTGGAGCTTGTCACAGGAAGAAAACCATTTGACAGTTCGAAACCGAGGAAAGAGCAATGGCTGGTGAAATGGGCTTCATCTCGGCTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAGGCATTAAAGGAACATTTTCCTCTAAGGTCCTCTCTCGCTTTGTCGATATTATCTCCCTTTGTATACAGCCTGTTAGGGAATTCCGACCACCAATGTCTGAAATAGTGGAACAACTAAGAAATCTTGAGAGGAAGATGGAGATTATGGCAAAACGTAGTGCAGCAGATGGAGTAACTGAAATGGATCCTTTTGAGAAATCTTTTCGTTCAACCAACACTGGTTTCGTATGTTCACCAGCATACAGCTATTCTTCCACCCCAGCTTAA 2223 43.09 MLQKRLFTYLSVVFYSTILTSLARAFTDPADVAALLDLYSALNYPPELIGWRKEGGDPCVESWTGVSCSGSSVIYLKIRGLNLTGNLGGQLNNLNNLKQLDVSSNRLTGEIPNNLPPNATHINMAFNHLSQNIPHTLPYMGNLRHLNLSHNTLSGVIGNVFTGLQNLREMDLSYNDFTGDLPSSFGSLTNITRLFLQNNKFTGSVAYLSHLPLIDLNIQDNSFSGIIPDNFRTIPNLWIGGNRFRAEVNSPPWDFPLEKAPVVQNISGPPTTQSNAIQNYPSRGVVRHQKKRLGPGGIVLLVGGLTLVVTFATFFVVFAMKKVHEKKINLKISHMLPHFLPLDGAEAGSSIAPEASTRSLPLSSLLMGGPRPIPLLNHTRTEKASGRQGFSKRCKLPVRTKIYTLAELQSTTNNFSQENLLGEGSLGAVYRAEFPDGQVLAVKNINMGALSFTEEQQFLDVVWTASRLRHPNIVTLLGYCVEHGQHLLGYEYVRNLSLDDALHCEAFRPLSWTVRLQISLGVARALDYLHSSFFPPFAHCNVKAANILLDEELMPHICDCGMSVLRPLVTNRVKTKASEIASGDRGYLAPEHGQPGFDNTRSDVYSFGVLLLELVTGRKPFDSSKPRKEQWLVKWASSRLHDNESLEQMVDPGIKGTFSSKVLSRFVDIISLCIQPVREFRPPMSEIVEQLRNLERKMEIMAKRSAADGVTEMDPFEKSFRSTNTGFVCSPAYSYSSTPA 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 61025765 61031318 - Tan0015150.1 Tan08g1474 761366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1474 740 Gene3D Ribonuclease Inhibitor 28 260 IPR032675 -
Tan08g1474 740 FunFam Leucine-rich repeat receptor-like protein kinase 493 702 - -
Tan08g1474 740 Pfam Leucine Rich Repeat 96 115 IPR001611 GO:0005515(InterPro)
Tan08g1474 740 Pfam Leucine Rich Repeat 213 232 IPR001611 GO:0005515(InterPro)
Tan08g1474 740 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Tan08g1474 740 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 255 - -
Tan08g1474 740 SUPERFAMILY L domain-like 27 238 - -
Tan08g1474 740 Gene3D Transferase(Phosphotransferase) domain 1 493 715 - -
Tan08g1474 740 SMART LRR_typ_2 94 118 IPR003591 -
Tan08g1474 740 SMART LRR_typ_2 164 187 IPR003591 -
Tan08g1474 740 SMART LRR_typ_2 188 211 IPR003591 -
Tan08g1474 740 SMART LRR_typ_2 140 163 IPR003591 -
Tan08g1474 740 Gene3D Phosphorylase Kinase; domain 1 377 492 - -
Tan08g1474 740 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 380 492 - -
Tan08g1474 740 Coils Coil 684 704 - -
Tan08g1474 740 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515(InterPro)
Tan08g1474 740 ProSiteProfiles Protein kinase domain profile. 415 701 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1474 740 Pfam Protein tyrosine and serine/threonine kinase 417 691 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1474 740 SUPERFAMILY Protein kinase-like (PK-like) 399 694 IPR011009 -
Tan08g1474 740 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 30 695 IPR046959 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1474 Tan-Chr8:61025765 Tan11g2046 Tan-Chr11:43040410 1.20E-97 dispersed
Tan08g1473 Tan-Chr8:61000791 Tan08g1474 Tan-Chr8:61025765 1.90E-201 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67950 PF07714 PK_Tyr_Ser-Thr 8.20E-34 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1474 - - - 0.0