Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1499 ATGGAAATCGACTCACAGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAATTATCGGATGAGCAGTACAAGGTTCAGAAGGAGACGTACAAGGGCCAGCAATACAGTCACATTTACTTTGCTCGACTCCACTTGATGAGAACAATACTTCATTCACTTGTCTCTAAGTGGAAACCTCATTTACCAGTTTGTACTGTATTGGGATTGGAGGAAGGCAAGGAATGTATCATTGCTGGGACCCTCTACAAGCACATGAAACTTAAACCTACCATTCTGGATGAGTATTCAAAGGAGAGATCTGCCACCCCACTTGTTAAGCCGCATAACTTTATGCACCCAGATGATCATCTAGTTTTGGAAGATGAAAGTGGAAGAGTCAAGCTTTCCGGGGCTGTGCTTATACCTTCTGTATACGTTACAGGGATTGTTGTTGCATTGCATGGAAAGGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACGTCCTAGATGCTGACTTGCCACCCCAGATAGAGCGGCCACTCATATCAAGCGAAGATAAGTACGTGGTTCTTTTATCGGGCCTAAGTATTGGGAGCAGTATCTCTAATCCTCTACAGTTTCAGCTCCTTATTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAAGGGATTGCAGCTCAAATTGTTCATGTTGTCATTTGTGGGAATTCTGTTAAAATTCCTCGTGGACTTTTAAACGGGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTGACAGAACCGCTTAAAGAGCTAGATATCCTAGTGAATCAGCTTGCAGCAGGTTTACCTGTGGACATCATGCCGGGTTCTACCGACCCAGCCAATTTTGCCTTGCCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTCGATAATTTCAGGTTTCTTGGAACATCTGGTCAGAACATAGATGATCTTGAGAAGTACTCGGACGCTAAAGATAAGCTTGAATTTATGGAGAGGACATTGAGATGGAGGCATCTGGCACCAACTGCTCCGAATACTCTTGGTTGCTATCCTTTCACTGATCGAGACCCTTTCCTGATTGAGAGCTGTCCTCATGTTTATTTTATCGGCAACCAGGACAAGTTCGATACTCGCTTAATAAAGGGACCTGAAGGGCAGATGGTAAGACTCATTTCGATTCCAAGATTTTGTGAGAAGGGGGTTGCCGTAATGCTTAACTTGAGAAATCTTGAATGCCACACTCTGAGTTTTGGGACTGAATTCAGCTGA 1317 43.81 MEIDSQKNLQRKQCTYELSDEQYKVQKETYKGQQYSHIYFARLHLMRTILHSLVSKWKPHLPVCTVLGLEEGKECIIAGTLYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLEDESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDVLDADLPPQIERPLISSEDKYVVLLSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVKIPRGLLNGQHLSAKDQTKLTEPLKELDILVNQLAAGLPVDIMPGSTDPANFALPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSDAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGPEGQMVRLISIPRFCEKGVAVMLNLRNLECHTLSFGTEFS 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 62317397 62322682 + Tan0009707.1 Tan08g1499 761391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1499 438 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 5 431 IPR024826 GO:0006271(PANTHER)|GO:0042575(PANTHER)|GO:0043625(PANTHER)
Tan08g1499 438 Gene3D - 40 166 - -
Tan08g1499 438 Pfam DNA polymerase alpha/epsilon subunit B 182 393 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Tan08g1499 438 Pfam DNA polymerase delta subunit OB-fold domain 34 161 IPR040663 -
Tan08g1499 438 CDD MPP_PolD2_C 196 433 IPR041863 -
Tan08g1499 438 FunFam DNA polymerase delta small subunit 169 438 - -
Tan08g1499 438 Gene3D - 169 437 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1499 K02328 - csv:101221438 824.698