Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1562 ATGAGGTCCATTGGTGATACAGATGTAGGAGAATATATTGTCCCAATACCACATGTTAAGCAAGTGAAGCTTTCTAATGCTGGCGGAAGACTCATAATTGCTTCTGATGGTATATGGGATGCTTTATCGTCTGATATGGTTGCAAAGTCTTGTCAAGGTTTACCTGCAGACCTTGCTGCTAAGCTAGTCGTGAAGGAGGCTTTGCGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTAATTATTGATATTATAACATCAGAGCAACCTATATTATTACCACCAACTCCTAGGAAGAAGCAAAATGTGCTTACCTCACTCTATGGGAAGAAATATCAAAACTTTTTGGGGAAATCTGCAAATAAACTTCTGCGGTTGGAGTCGTGGAGGAATTGTTCGAAGAGGGTTCGGTTATGCTTGCTGAAAGGCTAG 432 41.44 MRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMVAKSCQGLPADLAAKLVVKEALRSRGLKDDTTCLIIDIITSEQPILLPPTPRKKQNVLTSLYGKKYQNFLGKSANKLLRLESWRNCSKRVRLCLLKG 143
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 64268386 64268861 + Tan0007785.1 Tan08g1562 761454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1562 143 Pfam Protein phosphatase 2C 2 52 IPR001932 -
Tan08g1562 143 ProSiteProfiles PPM-type phosphatase domain profile. 1 84 IPR001932 -
Tan08g1562 143 CDD PP2Cc 2 84 IPR001932 -
Tan08g1562 143 Gene3D - 1 88 IPR036457 -
Tan08g1562 143 PANTHER PROTEIN PHOSPHATASE 2 83 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan08g1562 143 SUPERFAMILY PP2C-like 1 84 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1562 Tan-Chr8:64268386 Tan09g0121 Tan-Chr9:5771649 1.40E-61 dispersed
Tan08g1562 Tan-Chr8:64268386 Tan08g1276 Tan-Chr8:42487673 8.20E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1562 - - - 0.0