Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1623 ATGGCGACGTACCTTCATGGCAATTCTGAGTTCCAATCTGCTGATGGCGGCCTTCAAACCCTCGTCTTAATGAATCCCACCTATGTTCAATTCTCCGATACCCCGCCGCCTCCTCCACCGCCTCCTCCATCTCACCCTAATCTCGTCTTCTTCAATTCTGTTGCTGGTGCTAATATCTTCTCTACACAAACTCTGGCTCAAGCTCCTTCTCAACAATTCGTTGGTATCCCGTTATCGACAACGACGACCACTTCCCCGACGTCGCAAGACCATAATTCATATTCTTTGAATGCCCACCATGATATCTCCGCCTTGCACGGCTTTGTTCCGCGAGTTCAGCATGATATTTGGAAACCAATTGACCCATCCACGGCGGCGCGTGAGGCTGCACGCGCTCAGCAGGGGTTGTCTTTGAGTCTGTCTTCTCAGCATCCACCGGGTTTTGGGTCTAGAGATGTTCAGTCGCAGACCCAACAGGCGGTTTCCGGTGAGGAGAACGTGCGGATCTCCGGCGGATCGTCTTCCTCGGCTTCTGGTATCACCAATGGCGTGGCTGGAATTCAGGGGGTTTTGATTAGCTCCAAGTATCTCAAGGCTACACAAGAACTTCTGGATGAGGTTGTCAATGTCACACAAAATGGAATTAAGAACGAATCATCTCCAAAAAAGGCCACCGGCAATCAAAACAAGGTGATCGGAGATGCATCTGTTGCCACCGCAACTGCAGATGGTTCGTTCGAAGGGGATGCCGACGGCAAACGCGCCACCGAGCTCACGACCGCTGAGAGACAAGAAATTCAGATGAAGAAAGCAAAGCTCATAAGCATGCTCGATGAGGTGGAGCAGAGGTACAGGCAGTACCACCACCAGATGCAGATAGTGATATCTTCATTCGAGCAGGCAGCCGGAGCCGGGTCAGCAAGAACCTACACTGCGCTCGCACTTCAGACGATTTCGAAGCAATTCCGGTGCTTGAAAGATGCAATCACCGGCCAAATCAAAGCTGCAAATAAGAGTTTAGGAGAAGAAGAATGCATCGGAAGAAAAATGGAAGGTTCCCGGTTGAAATTCGTGGATAACCATCTCCGGCAACAGCGAGCTCTGCAACAATTGGGCATGATCCAACACAATGCTTGGAGACCCCAAAGAGGCTTACCGGAGAGATCCGTTTCGATTCTTCGCGCTTGGCTTTTCGAACACTTTCTCCACCCTTACCCTAAAGATTCAGACAAACACATGCTTGCTAAGCAAACAGGACTCACCAGAAGCCAGGTTTCGAATTGGTTCATAAATGCGAGAGTTCGACTGTGGAAGCCAATGGTCGAGGAGATGTACATGGAGGAAATCAAGGAACAAGAACAGAACGGCGGCGGCGGATCGGCACCGGCGACGGCGGCGGAAAAAAGCAACGACGATTCAGGTTCAAAATCCATAGCTGCTGCACCACCGGAGACCAAAAGCCCCAATTCAAAACAAGAAAACTCTCCAAACCAAAACGTTCATCCCTCAATCTCAATCTCAACATCCTCCGGCGGAAATGTTCGAAACCCATCTGGATTTACCCTCATCGGAACCTCATCGGAGCTCGACGGAATCACTCAAGGAAGCCCAAAAAAACAGAGAGGCCCCGAAATCCTCCATTCGTCAAACAACAACAACAACAACGTCCCTTTCATAAACATGGACATCAAACCCCGAGAAGAAGAACAAAATCAAAATCAAAATCACCATCACCACCACCATCATCTTTCAATGAAATTCGACGAAGAAAGACAAAACAGAGATGGGTATTCATTTCTAGGCCAACCCCATTTCAACATCGGCGGATTCGGCCAATACCCAATTGGCGAAATCGGCAGATTCGACGCCGATCAGTTCACTCCAAGATTCTCCGGCAACAATGGCGTCTCTTTGACTCTAGGCCTTCCCCATTGCGAAAATCTCTCTCTAAACGCAGCCACCCACCAAACCTTTCTCCCAAATCAGAGCATTCATTTAGGAAGAAGAACAGAAATTGGAAAACCCACTGATTTTTCCGCCATTAACGCCTCAACAGCTCACTCTTCCACTGCTTTTGAAACCATCAACATCCAAAATGGAAAAAGGTTTGCAGCTCAGTTACTGCCAGACTTTGTGGCCTAA 2142 48.97 MATYLHGNSEFQSADGGLQTLVLMNPTYVQFSDTPPPPPPPPPSHPNLVFFNSVAGANIFSTQTLAQAPSQQFVGIPLSTTTTTSPTSQDHNSYSLNAHHDISALHGFVPRVQHDIWKPIDPSTAAREAARAQQGLSLSLSSQHPPGFGSRDVQSQTQQAVSGEENVRISGGSSSSASGITNGVAGIQGVLISSKYLKATQELLDEVVNVTQNGIKNESSPKKATGNQNKVIGDASVATATADGSFEGDADGKRATELTTAERQEIQMKKAKLISMLDEVEQRYRQYHHQMQIVISSFEQAAGAGSARTYTALALQTISKQFRCLKDAITGQIKAANKSLGEEECIGRKMEGSRLKFVDNHLRQQRALQQLGMIQHNAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKEQEQNGGGGSAPATAAEKSNDDSGSKSIAAAPPETKSPNSKQENSPNQNVHPSISISTSSGGNVRNPSGFTLIGTSSELDGITQGSPKKQRGPEILHSSNNNNNNVPFINMDIKPREEEQNQNQNHHHHHHHLSMKFDEERQNRDGYSFLGQPHFNIGGFGQYPIGEIGRFDADQFTPRFSGNNGVSLTLGLPHCENLSLNAATHQTFLPNQSIHLGRRTEIGKPTDFSAINASTAHSSTAFETINIQNGKRFAAQLLPDFVA 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 65871483 65874892 - Tan0010497.1 Tan08g1623 761515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1623 713 Coils Coil 263 283 - -
Tan08g1623 713 SMART prehox3 185 331 IPR006563 -
Tan08g1623 713 SUPERFAMILY Homeodomain-like 380 446 IPR009057 -
Tan08g1623 713 ProSiteProfiles 'Homeobox' domain profile. 376 439 IPR001356 GO:0003677(InterPro)
Tan08g1623 713 Pfam Homeobox KN domain 396 435 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan08g1623 713 Pfam Associated with HOX 191 330 IPR006563 -
Tan08g1623 713 MobiDBLite consensus disorder prediction 134 178 - -
Tan08g1623 713 FunFam BEL1-like homeodomain protein 9 382 444 - -
Tan08g1623 713 MobiDBLite consensus disorder prediction 543 559 - -
Tan08g1623 713 CDD homeodomain 379 440 IPR001356 GO:0003677(InterPro)
Tan08g1623 713 SMART HOX_1 379 443 IPR001356 GO:0003677(InterPro)
Tan08g1623 713 MobiDBLite consensus disorder prediction 127 178 - -
Tan08g1623 713 MobiDBLite consensus disorder prediction 466 534 - -
Tan08g1623 713 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 131 488 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Tan08g1623 713 MobiDBLite consensus disorder prediction 450 587 - -
Tan08g1623 713 Gene3D - 374 453 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0396 Tan-Chr6:3010855 Tan08g1623 Tan-Chr8:65871483 1.40E-66 dispersed
Tan06g0397 Tan-Chr6:3010855 Tan08g1623 Tan-Chr8:65871483 3.20E-53 dispersed
Tan08g1623 Tan-Chr8:65871483 Tan08g2046 Tan-Chr8:72568008 1.60E-49 dispersed
Tan08g1623 Tan-Chr8:65871483 Tan08g1624 Tan-Chr8:65871483 0.00E+00 tandem
Tan02g1644 Tan-Chr2:76951184 Tan08g1623 Tan-Chr8:65871483 1.40E-42 transposed
Tan05g1259 Tan-Chr5:13579694 Tan08g1623 Tan-Chr8:65871483 1.60E-83 transposed
Tan07g1612 Tan-Chr7:67497117 Tan08g1623 Tan-Chr8:65871483 2.50E-72 transposed
Tan05g0081 Tan-Chr5:745653 Tan08g1623 Tan-Chr8:65871483 9.20E-138 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28185 PF07526 POX 3.20E-49 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1623 - - - 0.0