Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g1679 | ATGTCCTTAAACCACTTCTCTTCAGATAATTTCCACCACCACCCCATCATGCTTAACTCCAAATCCTCCGCCACCGCCGACCACCATCTCCACCACTACAAACAGCCCATGTTCGAGAAACCCTTGACTCCCAGCGACGTTGGCAAGCTCAACCGCCTCGTCATCCCCAAGCAATATGCTGAAAAATATTTTCCCCTTTCACCCGCGGCCGGTGGTGATCCGGCTGACAAGGCGGGCTTGCTTCTCAGCTTCGAAGATGAGTCCGGCAAGGTGTGGCGGTTCCGTTACTCTTATTGGAATAGTAGCCAGAGCTATGTGCTGACCAAGGGCTGGAGCCGCTTTGTCAAAGAGAAGCGCCTTGACGCTGGTGATGTCGTCGTTTTTGAACGCCACCCTCGCGATGGTGACAGGCTGTTCATTGGGTGGAAACGCCGCTCGGCGCCGTCTACGGCCGACACCACGGTGGTGCCGGCGAGTAGTGGTGCCGGCAGCGTTGTGGGTTGGACTAGAATGTTTTGTTCTTCAAACCCATATCCTTCTCATCATCATTCTCTTCCTTCACCACCATACCAATCTTCTGATTGTCCTCATGCAGAGTCCTCTGTTCGGAGTCAAACAGTGTCGGTTGGGAATTCAAAGATACTGCGGCTGTTCGGAGTGGACTTGGAGTGCCAAACCGACGTGTCGGAACCTGAACCGTCCTCGATGCTCGGTGGCGGGTCCAGTTTATCGGGTCGAGATCCAACCCGCCACAGCTTCTACACGCATTATTCTTCTCCTCTTCCTCATCACATGGATTTCACTTTCCCACAAGATGTCAAGCAGACGAAATATCAAGGATAG | 843 | 53.14 | MSLNHFSSDNFHHHPIMLNSKSSATADHHLHHYKQPMFEKPLTPSDVGKLNRLVIPKQYAEKYFPLSPAAGGDPADKAGLLLSFEDESGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVVFERHPRDGDRLFIGWKRRSAPSTADTTVVPASSGAGSVVGWTRMFCSSNPYPSHHHSLPSPPYQSSDCPHAESSVRSQTVSVGNSKILRLFGVDLECQTDVSEPEPSSMLGGGSSLSGRDPTRHSFYTHYSSPLPHHMDFTFPQDVKQTKYQG | 280 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 67117841 | 67121028 | + | Tan0013053.1 | Tan08g1679 | 761571 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g1679 | 280 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 12 | 222 | IPR044800 | GO:0003700(InterPro) | |
Tan08g1679 | 280 | SUPERFAMILY | DNA-binding pseudobarrel domain | 34 | 145 | IPR015300 | - | |
Tan08g1679 | 280 | MobiDBLite | consensus disorder prediction | 228 | 248 | - | - | |
Tan08g1679 | 280 | CDD | B3_DNA | 36 | 135 | IPR003340 | GO:0003677(InterPro) | |
Tan08g1679 | 280 | ProSiteProfiles | B3 DNA-binding domain profile. | 38 | 146 | IPR003340 | GO:0003677(InterPro) | |
Tan08g1679 | 280 | Gene3D | - | 28 | 155 | IPR015300 | - | |
Tan08g1679 | 280 | SMART | B3_2 | 38 | 146 | IPR003340 | GO:0003677(InterPro) | |
Tan08g1679 | 280 | Pfam | B3 DNA binding domain | 38 | 145 | IPR003340 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g0156 | Tan-Chr7:3960967 | Tan08g1679 | Tan-Chr8:67117841 | 1.00E-37 | dispersed | |
Tan08g1679 | Tan-Chr8:67117841 | Tan11g1931 | Tan-Chr11:29672929 | 8.20E-34 | dispersed | |
Tan08g1679 | Tan-Chr8:67117841 | Tan06g1845 | Tan-Chr6:44839824 | 1.10E-41 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28189 | PF02362 | B3 | 2.00E-30 | CL0405 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g1679 | K09287 | - | csv:101214938 | 400.979 |