Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g1697 | ATGTGGGCAAGCGCCGAAGGAGGGCCGCCGGAGGTCACTTTGGAGACTTCCATGGGTTCTTTCACCGTCGAGCTTTACTACAAACACGCACCGAGAACATGTAGAAACTTTATTGAGCTTTCTAGGCGAGGTTATTACGACAATGTCAAATTTCACCGGATTATTAAGGATTTTATAGTTCAAGGTGGCGATCCCACAGGAACTGGACGAGGTGGGGAATCTATTTATGGTAAGAAGTTTGAGGATGAAATAAAACCAGAGTTGAAGCATACTGGAGCTGGTATTCTATCAATGGCAAATGCTGGTCCTGATACAAATGGAAGCCAATTCTTTATCACTCTTGCTCCTTGCCCATCCTTAGATGGGAAACACTCCATCTTTGGACGAGTTTGTAGTGGAATGGAAATAATCAAAAGGCTTGGCAGTGTACAAACTGATAACAATGATAGACCCATCCATGATGTGAAAATACTACGGGCATCAGTTAAAGACTAA | 495 | 43.23 | MWASAEGGPPEVTLETSMGSFTVELYYKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGKKFEDEIKPELKHTGAGILSMANAGPDTNGSQFFITLAPCPSLDGKHSIFGRVCSGMEIIKRLGSVQTDNNDRPIHDVKILRASVKD | 164 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 68331859 | 68335541 | + | Tan0008112.1 | Tan08g1697 | 761589 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g1697 | 164 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 12 | 162 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Tan08g1697 | 164 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 9 | 159 | IPR044666 | GO:0000413(PANTHER)|GO:0003755(PANTHER)|GO:0071013(PANTHER) | |
| Tan08g1697 | 164 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 15 | 162 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Tan08g1697 | 164 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 46 | 63 | IPR020892 | GO:0003755(InterPro)|GO:0006457(InterPro) | |
| Tan08g1697 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 109 | 121 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Tan08g1697 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 51 | 63 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Tan08g1697 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 94 | 109 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Tan08g1697 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 137 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Tan08g1697 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 25 | 40 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Tan08g1697 | 164 | SUPERFAMILY | Cyclophilin-like | 11 | 162 | IPR029000 | - | |
| Tan08g1697 | 164 | PIRSF | Peptidylpro_ismrse | 3 | 164 | IPR024936 | GO:0003755(InterPro) | |
| Tan08g1697 | 164 | FunFam | Peptidyl-prolyl cis-trans isomerase | 2 | 164 | - | - | |
| Tan08g1697 | 164 | Gene3D | - | 3 | 164 | IPR029000 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4605 | Tan-Chr1:112033717 | Tan08g1697 | Tan-Chr8:68331859 | 5.10E-39 | dispersed | |
| Tan08g1193 | Tan-Chr8:30205793 | Tan08g1697 | Tan-Chr8:68331859 | 1.50E-43 | dispersed | |
| Tan08g1194 | Tan-Chr8:30205793 | Tan08g1697 | Tan-Chr8:68331859 | 1.50E-43 | dispersed | |
| Tan08g1697 | Tan-Chr8:68331859 | Tan10g0333 | Tan-Chr10:2735956 | 8.20E-42 | dispersed | |
| Tan08g1697 | Tan-Chr8:68331859 | Tan08g1698 | Tan-Chr8:68331859 | 6.40E-95 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g1697 | K12733 | - | csv:101222111 | 332.413 |