Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1698 ATGTGGGCAAGCGCCGAAGGAGGGCCGCCGGAGGTCACTTTGGAGACTTCCATGGGTTCTTTCACCGTCGAGCTTTACTACAAACACGCACCGAGAACATGTAGAAACTTTATTGAGCTTTCTAGGCGAGGTTATTACGACAATGTCAAATTTCACCGGATTATTAAGGATTTTATAGTTCAAGGTGGCGATCCCACAGGAACTGGACGAGGTGGGGAATCTATTTATGGTAAGAAGTTTGAGGATGAAATAAAACCAGAGTTGAAGCATACTGGAGCTGGTATTCTATCAATGGCAAATGCTGGTCCTGATACAAATGGAAGCCAATTCTTTATCACTCTTGCTCCTTGCCCATCCTTAGATGGGAAACACTCCATCTTTGGACGAGTTTGTAGTGGAATGGAAATAATCAAAAGGCTTGGCAGTGTACAAACTGATAACAATGATAGACCCATCCATGATGTGAAAATACTACGGGCATCAGTTAAAGACTAA 495 43.23 MWASAEGGPPEVTLETSMGSFTVELYYKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGKKFEDEIKPELKHTGAGILSMANAGPDTNGSQFFITLAPCPSLDGKHSIFGRVCSGMEIIKRLGSVQTDNNDRPIHDVKILRASVKD 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 68331859 68335541 + Tan0008112.2 Tan08g1698 761590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1698 164 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 162 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Tan08g1698 164 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 9 159 IPR044666 GO:0000413(PANTHER)|GO:0003755(PANTHER)|GO:0071013(PANTHER)
Tan08g1698 164 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 15 162 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Tan08g1698 164 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 46 63 IPR020892 GO:0003755(InterPro)|GO:0006457(InterPro)
Tan08g1698 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 121 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Tan08g1698 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Tan08g1698 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Tan08g1698 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Tan08g1698 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Tan08g1698 164 SUPERFAMILY Cyclophilin-like 11 162 IPR029000 -
Tan08g1698 164 PIRSF Peptidylpro_ismrse 3 164 IPR024936 GO:0003755(InterPro)
Tan08g1698 164 FunFam Peptidyl-prolyl cis-trans isomerase 2 164 - -
Tan08g1698 164 Gene3D - 3 164 IPR029000 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1698 Tan-Chr8:68331859 Tan10g0333 Tan-Chr10:2735956 8.20E-42 dispersed
Tan08g1697 Tan-Chr8:68331859 Tan08g1698 Tan-Chr8:68331859 6.40E-95 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1698 K12733 - csv:101222111 332.413