Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g1759 | ATGAAAAACCAAAGACAGTCATCTTATTCTCATGAGGAGTCAGAGGAACAACATTCTGCAAAGATATCTAAGTTTTTTGTTGAAGAGCCCCATCATCATCACCATCATCAACATCATCAACAACCTCAACCAGAATCCTCTGTTTCTTCTGTTCTTCCTCTGTTTGTACCTGATTCCAAAACTTCTACAATCTTGTCAGCATTTCCTGATTCTACTTCTTCTACTACTAGATTGCCAAGGATGTTGGGTTATTTCAGTGTGGCTCAAAGGCAGGAGCTTGAGCTTCAAGCTCTCATTTTCCGGTATATGTTGGCCGGCGCCGCCGTACCGGCGGAGCTTCTTCATCTCATCAAGAAAAGTCTTCTCTCTTCCACTACTCCTTTTCTTCTTCATCACCCTCTTCAACATTTCCCTCATTATCCCACCTCTTTGTTACAAGCAGGTTATTGGGGCAAAGCCGCCATGGATCCGGAGCCTGGCCGGTGCCGGAGAACCGACGGCAAAAAATGGCGTTGTTCAAGAGATGTGGTCGCCGGCCAGAAGTACTGCGAGCGCCACATGCACCGCGGCCGTAACCGTTCAAGAAAGCCTGTGGAAACTGCCACAACTAACCCCACCGCCACCACATCCGCCGCCGGCGCCGGCGGTTGTTCTCTCAGTTCCAACAACAATCGTGTTGTTGGTGGTGGCGGTGGTCGGCCTTTTGTGACTGTGGAAAGTGGGAATTATTTCTCTCTCTCTGGACAAACCCCATCCGTTGATCTTCTCCATCTCAATCAACGTCCTTCCTCTGATTCCTTATCGGAGAATAAGAATTTCTATGAATCCCATAAGGATGGTTCCGCCGGAGACGGCAAATCCGACGGCCATATATTGAGGCATTTCTTCGACGATTGGCCGAGGTCCGACACCGGAGGGAGTGACAACAATGCCACCCAACAAATGAATTCCACGTCCGCTTCCGCTACTTCCCTTTCAATTTCGATACCCGGGAACCCGTCGTCCTCCTCCGATGTGTCGTTGAAATTGTCTACCGGAGGAAGTTCTGATCAAGGCGGTGGCCACCGTATTCATCAAGATGGCAATGCCGACCGGGAGCACGTGCAGTTGAATTGGGCAGCTGGGTGGGCTGCCACGCAGATGGCGTCGATGGGCGGTCCGCTGGCGGAGGCGCTGCGATCGGCTAATAACAACTCGTCGCCGACGAGCGTGCTGCATCAGTTGCAAAGAGCGACGAACTCGGAAGCTAGCTTTATTAGTACTTGA | 1266 | 50.95 | MKNQRQSSYSHEESEEQHSAKISKFFVEEPHHHHHHQHHQQPQPESSVSSVLPLFVPDSKTSTILSAFPDSTSSTTRLPRMLGYFSVAQRQELELQALIFRYMLAGAAVPAELLHLIKKSLLSSTTPFLLHHPLQHFPHYPTSLLQAGYWGKAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVETATTNPTATTSAAGAGGCSLSSNNNRVVGGGGGRPFVTVESGNYFSLSGQTPSVDLLHLNQRPSSDSLSENKNFYESHKDGSAGDGKSDGHILRHFFDDWPRSDTGGSDNNATQQMNSTSASATSLSISIPGNPSSSSDVSLKLSTGGSSDQGGGHRIHQDGNADREHVQLNWAAGWAATQMASMGGPLAEALRSANNNSSPTSVLHQLQRATNSEASFIST | 421 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 69483338 | 69486264 | - | Tan0016900.1 | Tan08g1759 | 761651 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g1759 | 421 | ProSiteProfiles | QLQ domain profile. | 84 | 119 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Tan08g1759 | 421 | MobiDBLite | consensus disorder prediction | 259 | 360 | - | - | |
Tan08g1759 | 421 | MobiDBLite | consensus disorder prediction | 197 | 216 | - | - | |
Tan08g1759 | 421 | PANTHER | GROWTH-REGULATING FACTOR 5 | 46 | 335 | IPR031137 | GO:0005634(InterPro)|GO:0006351(InterPro)|GO:0032502(InterPro) | |
Tan08g1759 | 421 | MobiDBLite | consensus disorder prediction | 271 | 301 | - | - | |
Tan08g1759 | 421 | Pfam | WRC | 157 | 199 | IPR014977 | - | |
Tan08g1759 | 421 | SMART | QLQ_2 | 83 | 119 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Tan08g1759 | 421 | ProSiteProfiles | WRC domain profile. | 156 | 200 | IPR014977 | - | |
Tan08g1759 | 421 | MobiDBLite | consensus disorder prediction | 187 | 216 | - | - | |
Tan08g1759 | 421 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Tan08g1759 | 421 | MobiDBLite | consensus disorder prediction | 303 | 352 | - | - | |
Tan08g1759 | 421 | Pfam | QLQ | 85 | 117 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Tan08g1759 | 421 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g1759 | Tan-Chr8:69483338 | Tan09g1089 | Tan-Chr9:63239220 | 3.50E-28 | dispersed | |
Tan08g1759 | Tan-Chr8:69483338 | Tan08g0018 | Tan-Chr8:438945 | 2.00E-28 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28198 | PF08879 | WRC | 2.70E-22 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g1759 | - | - | - | 0.0 |