Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1759 ATGAAAAACCAAAGACAGTCATCTTATTCTCATGAGGAGTCAGAGGAACAACATTCTGCAAAGATATCTAAGTTTTTTGTTGAAGAGCCCCATCATCATCACCATCATCAACATCATCAACAACCTCAACCAGAATCCTCTGTTTCTTCTGTTCTTCCTCTGTTTGTACCTGATTCCAAAACTTCTACAATCTTGTCAGCATTTCCTGATTCTACTTCTTCTACTACTAGATTGCCAAGGATGTTGGGTTATTTCAGTGTGGCTCAAAGGCAGGAGCTTGAGCTTCAAGCTCTCATTTTCCGGTATATGTTGGCCGGCGCCGCCGTACCGGCGGAGCTTCTTCATCTCATCAAGAAAAGTCTTCTCTCTTCCACTACTCCTTTTCTTCTTCATCACCCTCTTCAACATTTCCCTCATTATCCCACCTCTTTGTTACAAGCAGGTTATTGGGGCAAAGCCGCCATGGATCCGGAGCCTGGCCGGTGCCGGAGAACCGACGGCAAAAAATGGCGTTGTTCAAGAGATGTGGTCGCCGGCCAGAAGTACTGCGAGCGCCACATGCACCGCGGCCGTAACCGTTCAAGAAAGCCTGTGGAAACTGCCACAACTAACCCCACCGCCACCACATCCGCCGCCGGCGCCGGCGGTTGTTCTCTCAGTTCCAACAACAATCGTGTTGTTGGTGGTGGCGGTGGTCGGCCTTTTGTGACTGTGGAAAGTGGGAATTATTTCTCTCTCTCTGGACAAACCCCATCCGTTGATCTTCTCCATCTCAATCAACGTCCTTCCTCTGATTCCTTATCGGAGAATAAGAATTTCTATGAATCCCATAAGGATGGTTCCGCCGGAGACGGCAAATCCGACGGCCATATATTGAGGCATTTCTTCGACGATTGGCCGAGGTCCGACACCGGAGGGAGTGACAACAATGCCACCCAACAAATGAATTCCACGTCCGCTTCCGCTACTTCCCTTTCAATTTCGATACCCGGGAACCCGTCGTCCTCCTCCGATGTGTCGTTGAAATTGTCTACCGGAGGAAGTTCTGATCAAGGCGGTGGCCACCGTATTCATCAAGATGGCAATGCCGACCGGGAGCACGTGCAGTTGAATTGGGCAGCTGGGTGGGCTGCCACGCAGATGGCGTCGATGGGCGGTCCGCTGGCGGAGGCGCTGCGATCGGCTAATAACAACTCGTCGCCGACGAGCGTGCTGCATCAGTTGCAAAGAGCGACGAACTCGGAAGCTAGCTTTATTAGTACTTGA 1266 50.95 MKNQRQSSYSHEESEEQHSAKISKFFVEEPHHHHHHQHHQQPQPESSVSSVLPLFVPDSKTSTILSAFPDSTSSTTRLPRMLGYFSVAQRQELELQALIFRYMLAGAAVPAELLHLIKKSLLSSTTPFLLHHPLQHFPHYPTSLLQAGYWGKAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVETATTNPTATTSAAGAGGCSLSSNNNRVVGGGGGRPFVTVESGNYFSLSGQTPSVDLLHLNQRPSSDSLSENKNFYESHKDGSAGDGKSDGHILRHFFDDWPRSDTGGSDNNATQQMNSTSASATSLSISIPGNPSSSSDVSLKLSTGGSSDQGGGHRIHQDGNADREHVQLNWAAGWAATQMASMGGPLAEALRSANNNSSPTSVLHQLQRATNSEASFIST 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 69483338 69486264 - Tan0016900.1 Tan08g1759 761651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1759 421 ProSiteProfiles QLQ domain profile. 84 119 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Tan08g1759 421 MobiDBLite consensus disorder prediction 259 360 - -
Tan08g1759 421 MobiDBLite consensus disorder prediction 197 216 - -
Tan08g1759 421 PANTHER GROWTH-REGULATING FACTOR 5 46 335 IPR031137 GO:0005634(InterPro)|GO:0006351(InterPro)|GO:0032502(InterPro)
Tan08g1759 421 MobiDBLite consensus disorder prediction 271 301 - -
Tan08g1759 421 Pfam WRC 157 199 IPR014977 -
Tan08g1759 421 SMART QLQ_2 83 119 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Tan08g1759 421 ProSiteProfiles WRC domain profile. 156 200 IPR014977 -
Tan08g1759 421 MobiDBLite consensus disorder prediction 187 216 - -
Tan08g1759 421 MobiDBLite consensus disorder prediction 1 50 - -
Tan08g1759 421 MobiDBLite consensus disorder prediction 303 352 - -
Tan08g1759 421 Pfam QLQ 85 117 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Tan08g1759 421 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1759 Tan-Chr8:69483338 Tan09g1089 Tan-Chr9:63239220 3.50E-28 dispersed
Tan08g1759 Tan-Chr8:69483338 Tan08g0018 Tan-Chr8:438945 2.00E-28 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28198 PF08879 WRC 2.70E-22 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1759 - - - 0.0