Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1774 ATGGAAATGCCCGGCAGGAGGTTGAACTATACGCTTCTCAGTCAAATTCCAGACGACCAATACAGTGGCGGTGTTGCTGGAGCTTCCTCATCGTTGATCGAATCATCTTCGGGAGAGGGGAAGAACGACAAGAGGAAGTTGGAAAGAGGATTGGATTGGGAAGCTGGTACTGATCACAGGGCGGGCCAGCAGCAGCAGGTGAATTGGATCGGCAATATGTACTCAGCCTTTGGTTTGCAGAGGCAGTCCAGTGGAAGTAGCTTTGGAGAGAGCTCGATATCCGGGGAGTATTATGCACCGACGCCGTCGACTACGGTGGCTAATGAGATGGATGATGTGCTGAGGATTGGAGGCGATTCGAGAGCTCAGGCAGCCGAGATGGCCGCCGGGACTGGAGGATCTTCTGGTAAGAGCTGGGCGCAACAGACGGAGGAGAGTTATCAACTGCAGTTGGCATTGGCGCTTCGGCTTTCCTCAGAGGCGACTTGTGCTGACGATCCTAATTTCTTAAATCCATTTCAGGATGATTCAGCTTTAAGGAGGTCGATTAGCTCTGCTGAGGCTGTGTCTCATCGATTTTGGGTGAATGGCTGTCTATCATACTTTGACAAAGTTCCTGATGGGTTTTATCTAATCCATGGAATGGATCCATATGTATGGACTGTGTGCACCAGCCTGCCTGATAATGATCGCATGCCATCAATTGAATCTCTAAAGTCTGTTGATCCTAGCACAGATTCTTCAATTGAAGTTGTTTTGATTGATCAGCGCACTGATCCCAACTTAAAAGACCTCCAAAATCGGGTCCAAAGCATTTCTTGCAGCTCTATAACCACAAAAGAGGTTGTAGACCAGCTTGCAAAACTTGTCTGCAGGAGTTTGGGTGGCTCAGTTTCTGGAGAAGATGTGTTGGTGTCCATCTGGAAGGAGTGCAGTGATAACTTGAAGGAGACCTTAGGCTCAGTCGTCGTTCCTCTTGGTGCACTCTCTGTAGGACGCTGCCGGCATCGTGCTCTTCTTTTCAAGGTGTTAGCTGACACAATTGATTTACCCTGTCGAGTAGCCAAGGGCTGTAAATATTGCTCATGCCATGATTCTTCTTCTTGTCTTGTTCAGTTTGGGCTTGATAAGGAGTATCTGGTTGACTTGATTGGCAATCCTGGTTGCTTATATGAGCCTGATTCCTTACTCAATGGTCCATCCTCCATTTTGATCTCCTCACCATTGCGACTTCCACGACTAAAGCCAGTAGAGCCTGCCATTGATTTCAGGTCACTGGCTAAACAGTACTTTTCAGATTGCCAGTTGCTTAATGTTGTTTTCGATGAAAATTCCTCAGAAATTACTGTGGATGGAGAAGATGGCACACTCCCCTTGTATCTAAAGCAGTTTGAAAGGAAGTTCACAAACAGAAGCAACCAAATGCTTGTCACGGGTGATCACGATGAAAAACCCATTTTACCGCATGGAAAAACTTCGCAGCCTAACTCCCAAGACAGAGATTTCCAACTATTTAAACTGCGTGATAATTCTCACAATGTTATACAACCAACTGTCCTGGTTGAGGATCCAATCCCACTGAAGTACATTCCTCATATTAGCCGTAGAAGTGTGCAGTCACTTTTGGATATGTCCCACCCAAGGATGGATTCTACTATGGACGTAAGGTTTGCACAAGGTCAGCTAATACCAAGCACTCGGAGTAAAACACTTCCCCTTGGTGCAGAGGATTTGGACATTCCATGGGGTGATCTTGTTTTAAAAGAAAGAATTGGAGCAGGTTCCTTCGGAACTGTACATCGTGCTGATTGGAATGGATCGGAAGTTGCTGTGAAGATCCTCACAGAACAAGACTTCCATCCTGAACGTGTTAATGAGTTTTTGAGAGAGGTTGCTATCATGAAATCCTTACGACATCCTAATATTGTACTGTTTATGGGTGCCGTGACGAAGCCACCAAACCTGTCCATTGTCACTGAATATCTATCGAGAGGTAGCTTGTATAGGCTTTTGCATAAGTCAGGCGTCAAAGACATAGACGAAACACGTCGGATAAATATGGCTTTTGATGTGGCAAAGGGAATGAACTATCTCCATAGACGTGACCCTCCAATTGTTCATCGTGATTTAAAATCACCAAATCTTTTAGTCGACAAGAAGTATACAGTAAAGGTTTGTGATTTTGGTCTCTCCCGCTTAAAGGCACGCACATTTCTTTCATCAAAATCTGCAGCTGGAACACCTGAGTGGATGGCACCAGAAGTGCTACGCGATGAGCCCTCAAATGAAAAATCAGATGTTTACAGCTTTGGAGTGATTTTGTGGGAGTTGGCAACTTTGCAACAGCCATGGTGTAATCTAAACCCAGCTCAGGTTGTTGCAGCTGTTGGATTTAAGGGCAAAAGGCTTGAAATTCCACGAAATGTAAATCCCAAACTGGCATCCTTAATAGTGGCATGCTGGGCCGATGAGCCCTGGAAACGTCCATCTTTTTCCAGCATAATGGAAACCTTGAAGCCAATGACTAAACAAGCACCACCACAACAAGGTCGTGCAGACACACTCTCGGTTATGTGA 2577 45.63 MEMPGRRLNYTLLSQIPDDQYSGGVAGASSSLIESSSGEGKNDKRKLERGLDWEAGTDHRAGQQQQVNWIGNMYSAFGLQRQSSGSSFGESSISGEYYAPTPSTTVANEMDDVLRIGGDSRAQAAEMAAGTGGSSGKSWAQQTEESYQLQLALALRLSSEATCADDPNFLNPFQDDSALRRSISSAEAVSHRFWVNGCLSYFDKVPDGFYLIHGMDPYVWTVCTSLPDNDRMPSIESLKSVDPSTDSSIEVVLIDQRTDPNLKDLQNRVQSISCSSITTKEVVDQLAKLVCRSLGGSVSGEDVLVSIWKECSDNLKETLGSVVVPLGALSVGRCRHRALLFKVLADTIDLPCRVAKGCKYCSCHDSSSCLVQFGLDKEYLVDLIGNPGCLYEPDSLLNGPSSILISSPLRLPRLKPVEPAIDFRSLAKQYFSDCQLLNVVFDENSSEITVDGEDGTLPLYLKQFERKFTNRSNQMLVTGDHDEKPILPHGKTSQPNSQDRDFQLFKLRDNSHNVIQPTVLVEDPIPLKYIPHISRRSVQSLLDMSHPRMDSTMDVRFAQGQLIPSTRSKTLPLGAEDLDIPWGDLVLKERIGAGSFGTVHRADWNGSEVAVKILTEQDFHPERVNEFLREVAIMKSLRHPNIVLFMGAVTKPPNLSIVTEYLSRGSLYRLLHKSGVKDIDETRRINMAFDVAKGMNYLHRRDPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKARTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWCNLNPAQVVAAVGFKGKRLEIPRNVNPKLASLIVACWADEPWKRPSFSSIMETLKPMTKQAPPQQGRADTLSVM 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 69733366 69752898 - Tan0012400.1 Tan08g1774 761666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1774 858 Gene3D Transferase(Phosphotransferase) domain 1 664 852 - -
Tan08g1774 858 Pfam Protein tyrosine and serine/threonine kinase 586 838 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1774 858 FunFam Serine/threonine-protein kinase CTR1 664 848 - -
Tan08g1774 858 MobiDBLite consensus disorder prediction 24 46 - -
Tan08g1774 858 PANTHER SERINE-THREONINE PROTEIN KINASE 150 841 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan08g1774 858 SUPERFAMILY Protein kinase-like (PK-like) 565 838 IPR011009 -
Tan08g1774 858 CDD STKc_MAP3K-like 591 838 - -
Tan08g1774 858 PRINTS Tyrosine kinase catalytic domain signature 746 756 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1774 858 PRINTS Tyrosine kinase catalytic domain signature 699 717 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1774 858 PRINTS Tyrosine kinase catalytic domain signature 659 672 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1774 858 PRINTS Tyrosine kinase catalytic domain signature 765 787 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1774 858 PRINTS Tyrosine kinase catalytic domain signature 809 831 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1774 858 ProSitePatterns Protein kinases ATP-binding region signature. 591 612 IPR017441 GO:0005524(InterPro)
Tan08g1774 858 SMART serkin_6 585 842 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1774 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1774 858 FunFam Serine/threonine-protein kinase isoform 1 575 663 - -
Tan08g1774 858 ProSiteProfiles Protein kinase domain profile. 585 842 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1774 858 Pfam Ethylene-responsive protein kinase Le-CTR1 186 390 - -
Tan08g1774 858 Gene3D Phosphorylase Kinase; domain 1 578 663 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1175 Tan-Chr3:68064574 Tan08g1774 Tan-Chr8:69733366 0.00E+00 dispersed
Tan03g1176 Tan-Chr3:68064574 Tan08g1774 Tan-Chr8:69733366 0.00E+00 dispersed
Tan08g1774 Tan-Chr8:69733366 Tan09g0553 Tan-Chr9:49097452 1.30E-127 dispersed
Tan08g1774 Tan-Chr8:69733366 Tan08g1775 Tan-Chr8:69733366 0.00E+00 tandem
Tan01g3858 Tan-Chr1:103353479 Tan08g1774 Tan-Chr8:69733366 3.40E-177 transposed
Tan03g0719 Tan-Chr3:62706325 Tan08g1774 Tan-Chr8:69733366 1.30E-23 transposed
Tan06g2524 Tan-Chr6:77851752 Tan08g1774 Tan-Chr8:69733366 2.30E-27 transposed
Tan03g1173 Tan-Chr3:68064574 Tan08g1774 Tan-Chr8:69733366 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67959 PF07714 PK_Tyr_Ser-Thr 7.10E-71 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1774 K14510 - csv:101208452 1538.47