Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g1774 | ATGGAAATGCCCGGCAGGAGGTTGAACTATACGCTTCTCAGTCAAATTCCAGACGACCAATACAGTGGCGGTGTTGCTGGAGCTTCCTCATCGTTGATCGAATCATCTTCGGGAGAGGGGAAGAACGACAAGAGGAAGTTGGAAAGAGGATTGGATTGGGAAGCTGGTACTGATCACAGGGCGGGCCAGCAGCAGCAGGTGAATTGGATCGGCAATATGTACTCAGCCTTTGGTTTGCAGAGGCAGTCCAGTGGAAGTAGCTTTGGAGAGAGCTCGATATCCGGGGAGTATTATGCACCGACGCCGTCGACTACGGTGGCTAATGAGATGGATGATGTGCTGAGGATTGGAGGCGATTCGAGAGCTCAGGCAGCCGAGATGGCCGCCGGGACTGGAGGATCTTCTGGTAAGAGCTGGGCGCAACAGACGGAGGAGAGTTATCAACTGCAGTTGGCATTGGCGCTTCGGCTTTCCTCAGAGGCGACTTGTGCTGACGATCCTAATTTCTTAAATCCATTTCAGGATGATTCAGCTTTAAGGAGGTCGATTAGCTCTGCTGAGGCTGTGTCTCATCGATTTTGGGTGAATGGCTGTCTATCATACTTTGACAAAGTTCCTGATGGGTTTTATCTAATCCATGGAATGGATCCATATGTATGGACTGTGTGCACCAGCCTGCCTGATAATGATCGCATGCCATCAATTGAATCTCTAAAGTCTGTTGATCCTAGCACAGATTCTTCAATTGAAGTTGTTTTGATTGATCAGCGCACTGATCCCAACTTAAAAGACCTCCAAAATCGGGTCCAAAGCATTTCTTGCAGCTCTATAACCACAAAAGAGGTTGTAGACCAGCTTGCAAAACTTGTCTGCAGGAGTTTGGGTGGCTCAGTTTCTGGAGAAGATGTGTTGGTGTCCATCTGGAAGGAGTGCAGTGATAACTTGAAGGAGACCTTAGGCTCAGTCGTCGTTCCTCTTGGTGCACTCTCTGTAGGACGCTGCCGGCATCGTGCTCTTCTTTTCAAGGTGTTAGCTGACACAATTGATTTACCCTGTCGAGTAGCCAAGGGCTGTAAATATTGCTCATGCCATGATTCTTCTTCTTGTCTTGTTCAGTTTGGGCTTGATAAGGAGTATCTGGTTGACTTGATTGGCAATCCTGGTTGCTTATATGAGCCTGATTCCTTACTCAATGGTCCATCCTCCATTTTGATCTCCTCACCATTGCGACTTCCACGACTAAAGCCAGTAGAGCCTGCCATTGATTTCAGGTCACTGGCTAAACAGTACTTTTCAGATTGCCAGTTGCTTAATGTTGTTTTCGATGAAAATTCCTCAGAAATTACTGTGGATGGAGAAGATGGCACACTCCCCTTGTATCTAAAGCAGTTTGAAAGGAAGTTCACAAACAGAAGCAACCAAATGCTTGTCACGGGTGATCACGATGAAAAACCCATTTTACCGCATGGAAAAACTTCGCAGCCTAACTCCCAAGACAGAGATTTCCAACTATTTAAACTGCGTGATAATTCTCACAATGTTATACAACCAACTGTCCTGGTTGAGGATCCAATCCCACTGAAGTACATTCCTCATATTAGCCGTAGAAGTGTGCAGTCACTTTTGGATATGTCCCACCCAAGGATGGATTCTACTATGGACGTAAGGTTTGCACAAGGTCAGCTAATACCAAGCACTCGGAGTAAAACACTTCCCCTTGGTGCAGAGGATTTGGACATTCCATGGGGTGATCTTGTTTTAAAAGAAAGAATTGGAGCAGGTTCCTTCGGAACTGTACATCGTGCTGATTGGAATGGATCGGAAGTTGCTGTGAAGATCCTCACAGAACAAGACTTCCATCCTGAACGTGTTAATGAGTTTTTGAGAGAGGTTGCTATCATGAAATCCTTACGACATCCTAATATTGTACTGTTTATGGGTGCCGTGACGAAGCCACCAAACCTGTCCATTGTCACTGAATATCTATCGAGAGGTAGCTTGTATAGGCTTTTGCATAAGTCAGGCGTCAAAGACATAGACGAAACACGTCGGATAAATATGGCTTTTGATGTGGCAAAGGGAATGAACTATCTCCATAGACGTGACCCTCCAATTGTTCATCGTGATTTAAAATCACCAAATCTTTTAGTCGACAAGAAGTATACAGTAAAGGTTTGTGATTTTGGTCTCTCCCGCTTAAAGGCACGCACATTTCTTTCATCAAAATCTGCAGCTGGAACACCTGAGTGGATGGCACCAGAAGTGCTACGCGATGAGCCCTCAAATGAAAAATCAGATGTTTACAGCTTTGGAGTGATTTTGTGGGAGTTGGCAACTTTGCAACAGCCATGGTGTAATCTAAACCCAGCTCAGGTTGTTGCAGCTGTTGGATTTAAGGGCAAAAGGCTTGAAATTCCACGAAATGTAAATCCCAAACTGGCATCCTTAATAGTGGCATGCTGGGCCGATGAGCCCTGGAAACGTCCATCTTTTTCCAGCATAATGGAAACCTTGAAGCCAATGACTAAACAAGCACCACCACAACAAGGTCGTGCAGACACACTCTCGGTTATGTGA | 2577 | 45.63 | MEMPGRRLNYTLLSQIPDDQYSGGVAGASSSLIESSSGEGKNDKRKLERGLDWEAGTDHRAGQQQQVNWIGNMYSAFGLQRQSSGSSFGESSISGEYYAPTPSTTVANEMDDVLRIGGDSRAQAAEMAAGTGGSSGKSWAQQTEESYQLQLALALRLSSEATCADDPNFLNPFQDDSALRRSISSAEAVSHRFWVNGCLSYFDKVPDGFYLIHGMDPYVWTVCTSLPDNDRMPSIESLKSVDPSTDSSIEVVLIDQRTDPNLKDLQNRVQSISCSSITTKEVVDQLAKLVCRSLGGSVSGEDVLVSIWKECSDNLKETLGSVVVPLGALSVGRCRHRALLFKVLADTIDLPCRVAKGCKYCSCHDSSSCLVQFGLDKEYLVDLIGNPGCLYEPDSLLNGPSSILISSPLRLPRLKPVEPAIDFRSLAKQYFSDCQLLNVVFDENSSEITVDGEDGTLPLYLKQFERKFTNRSNQMLVTGDHDEKPILPHGKTSQPNSQDRDFQLFKLRDNSHNVIQPTVLVEDPIPLKYIPHISRRSVQSLLDMSHPRMDSTMDVRFAQGQLIPSTRSKTLPLGAEDLDIPWGDLVLKERIGAGSFGTVHRADWNGSEVAVKILTEQDFHPERVNEFLREVAIMKSLRHPNIVLFMGAVTKPPNLSIVTEYLSRGSLYRLLHKSGVKDIDETRRINMAFDVAKGMNYLHRRDPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKARTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWCNLNPAQVVAAVGFKGKRLEIPRNVNPKLASLIVACWADEPWKRPSFSSIMETLKPMTKQAPPQQGRADTLSVM | 858 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 69733366 | 69752898 | - | Tan0012400.1 | Tan08g1774 | 761666 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g1774 | 858 | Gene3D | Transferase(Phosphotransferase) domain 1 | 664 | 852 | - | - | |
Tan08g1774 | 858 | Pfam | Protein tyrosine and serine/threonine kinase | 586 | 838 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g1774 | 858 | FunFam | Serine/threonine-protein kinase CTR1 | 664 | 848 | - | - | |
Tan08g1774 | 858 | MobiDBLite | consensus disorder prediction | 24 | 46 | - | - | |
Tan08g1774 | 858 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 150 | 841 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Tan08g1774 | 858 | SUPERFAMILY | Protein kinase-like (PK-like) | 565 | 838 | IPR011009 | - | |
Tan08g1774 | 858 | CDD | STKc_MAP3K-like | 591 | 838 | - | - | |
Tan08g1774 | 858 | PRINTS | Tyrosine kinase catalytic domain signature | 746 | 756 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g1774 | 858 | PRINTS | Tyrosine kinase catalytic domain signature | 699 | 717 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g1774 | 858 | PRINTS | Tyrosine kinase catalytic domain signature | 659 | 672 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g1774 | 858 | PRINTS | Tyrosine kinase catalytic domain signature | 765 | 787 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g1774 | 858 | PRINTS | Tyrosine kinase catalytic domain signature | 809 | 831 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g1774 | 858 | ProSitePatterns | Protein kinases ATP-binding region signature. | 591 | 612 | IPR017441 | GO:0005524(InterPro) | |
Tan08g1774 | 858 | SMART | serkin_6 | 585 | 842 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g1774 | 858 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 705 | 717 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g1774 | 858 | FunFam | Serine/threonine-protein kinase isoform 1 | 575 | 663 | - | - | |
Tan08g1774 | 858 | ProSiteProfiles | Protein kinase domain profile. | 585 | 842 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g1774 | 858 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 186 | 390 | - | - | |
Tan08g1774 | 858 | Gene3D | Phosphorylase Kinase; domain 1 | 578 | 663 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1175 | Tan-Chr3:68064574 | Tan08g1774 | Tan-Chr8:69733366 | 0.00E+00 | dispersed | |
Tan03g1176 | Tan-Chr3:68064574 | Tan08g1774 | Tan-Chr8:69733366 | 0.00E+00 | dispersed | |
Tan08g1774 | Tan-Chr8:69733366 | Tan09g0553 | Tan-Chr9:49097452 | 1.30E-127 | dispersed | |
Tan08g1774 | Tan-Chr8:69733366 | Tan08g1775 | Tan-Chr8:69733366 | 0.00E+00 | tandem | |
Tan01g3858 | Tan-Chr1:103353479 | Tan08g1774 | Tan-Chr8:69733366 | 3.40E-177 | transposed | |
Tan03g0719 | Tan-Chr3:62706325 | Tan08g1774 | Tan-Chr8:69733366 | 1.30E-23 | transposed | |
Tan06g2524 | Tan-Chr6:77851752 | Tan08g1774 | Tan-Chr8:69733366 | 2.30E-27 | transposed | |
Tan03g1173 | Tan-Chr3:68064574 | Tan08g1774 | Tan-Chr8:69733366 | 0.00E+00 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67959 | PF07714 | PK_Tyr_Ser-Thr | 7.10E-71 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g1774 | K14510 | - | csv:101208452 | 1538.47 |