Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g1787 | ATGGAGTTTGAAATTGCAGGTTTTGTTTTCGTGTCCTTTCTCTGGGGTTTGTGGGTGTGGCGCCGCCGTGGAGCGGCGGCGGAGGAGCAGCTTCCGCCAGGGCCACCGCGCTGGCCAGTGGTCGGAAACTTGCTCCAACTCAGCTTTTCCGCTCACGAATCCTTCACCAAACTCGCCGCGAAGTACGGTCCAATCATGACCCTCCACCTCGGGTCAATGAACACGGTGGTCATCTCATCAAGCACGGCGGCGCGTGAGATGTTCAAAAACCACGACGCGGCGGTGGCAGGGCGCATGATATACGACGCAATGAGAGGGGACCACGGCACAGAAGGCTCCCTAATCACCTCCCAATACGGGCCCCACTGGCGGATGCTGCGACGCCTCGCCACGACCGAGTTCTTCATCACGCGCCGCCTCGACACCATGCGACACGTCCGCCGCCGCTGCGTCGAGGCCATGGTCCGCTTCGTTGAGGAGGAAACAACCGGTTGTGACGGCGCGTGGAGAAACGCGCCGCCGATCGACTTGGGGAAATTCTTCTTCGTAATGGGGTTTAATTTAATAGGGAATCTGATATTTTCGAAAGATCTATTGGAGCCGAAATCGAAGAAAGGGAAGGAATTTTACAACCATGCGAGGAAGGTGATGGAGATGGCCGGAAAGCCGAATGTGGCGGACTTTTTACCGGCGTTCCGGTGGGTGGATCCGCAGGGGATTAGGAAGAAGACGCAGTTTCATGTGAATAAAGCGTTTGAAATAGCAGGAGAGTTTATAAAGGAAAGATTAAAGGAAAAAGAAAGTGAAGAAGAGAAAAAAGAAGAAGGAAGAAAGGATTATTTAGATGTGCTTTTGGAATTTCGTGGTGATGGCGTTGAGGAACCCTCTCGTTTCTCTTCATGGATCATCAACGTTATCGTCCTCGAGATGTTCACGGCGGGGACGGACACAACCACCAGTACACTGGAATGGGCAATGGCGGAGCTCCTCCACAACCCGGCGGCGCTGCAGAAACTTCAGGCAGAGCTCCGATCGACAATCCCGCCGGATGACAACCTCGAAGAAACCCATCTCCAAAACCTCCCCTATCTCGACGCCGTCGTCAAAGAAACCCTCCGCCTTCACCCTCCGCTGCCGTTCCTCTTCCCGAGAATGGCCATGAAGCCCTGCAGAATCCTCGGCTACCGGATTCCAGCCGAAACCCAAGTCTTGGTCAACGTCTGGGCCATCGGCCGAGACCCCGGTAACTGGAAAGACGCTTCGGTTTTCTCGCCGGAGAGATTCTTGGAGCCCGGTGGCGGCGGCGTAAAGGATTTTAAAGGTCAGCACTTTGACTTCATTCCGTTTGGCTCCGGCCGGCGCATGTGCCCGGCGGTGCCGCTGGCAGCAAGGGTGCTTCCGGTGGCCTTGGGTTCGTTGATTCTGTCGTTTGATTGGGCGTTGCCGGACGGAATGTCGCCGGAGGAGATGGACATGTCGGAGCAAATGGGGATTACTCTTAGAAAGAAAATTCCTTTGAAGGCCATTCCGACTCCTCATAAACGACGTCGTTTCTGA | 1557 | 55.11 | MEFEIAGFVFVSFLWGLWVWRRRGAAAEEQLPPGPPRWPVVGNLLQLSFSAHESFTKLAAKYGPIMTLHLGSMNTVVISSSTAAREMFKNHDAAVAGRMIYDAMRGDHGTEGSLITSQYGPHWRMLRRLATTEFFITRRLDTMRHVRRRCVEAMVRFVEEETTGCDGAWRNAPPIDLGKFFFVMGFNLIGNLIFSKDLLEPKSKKGKEFYNHARKVMEMAGKPNVADFLPAFRWVDPQGIRKKTQFHVNKAFEIAGEFIKERLKEKESEEEKKEEGRKDYLDVLLEFRGDGVEEPSRFSSWIINVIVLEMFTAGTDTTTSTLEWAMAELLHNPAALQKLQAELRSTIPPDDNLEETHLQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCRILGYRIPAETQVLVNVWAIGRDPGNWKDASVFSPERFLEPGGGGVKDFKGQHFDFIPFGSGRRMCPAVPLAARVLPVALGSLILSFDWALPDGMSPEEMDMSEQMGITLRKKIPLKAIPTPHKRRRF | 518 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 69833424 | 69838846 | - | Tan0009208.1 | Tan08g1787 | 761679 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g1787 | 518 | SUPERFAMILY | Cytochrome P450 | 32 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | CDD | CYP76-like | 59 | 510 | - | - | |
| Tan08g1787 | 518 | FunFam | Cytochrome P450 76C4 | 23 | 509 | - | - | |
| Tan08g1787 | 518 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | PRINTS | P450 superfamily signature | 447 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 12 | 514 | - | - | |
| Tan08g1787 | 518 | Pfam | Cytochrome P450 | 32 | 501 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 449 | 458 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan08g1787 | 518 | Gene3D | Cytochrome P450 | 25 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | PRINTS | E-class P450 group I signature | 446 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g1787 | 518 | PRINTS | E-class P450 group I signature | 456 | 479 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan07g2153 | Tan-Chr7:73174721 | Tan08g1787 | Tan-Chr8:69833424 | 6.70E-95 | dispersed | |
| Tan08g1787 | Tan-Chr8:69833424 | Tan09g2051 | Tan-Chr9:71010056 | 6.10E-83 | dispersed | |
| Tan08g1787 | Tan-Chr8:69833424 | Tan03g2051 | Tan-Chr3:75473700 | 5.90E-78 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g1787 | - | - | - | 0.0 |