Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g1792 | ATGGGGGCCTCGCTTTCGAACTTGAGTGACGTTGCCAATGGCTCCACCATCGGTCCTGGCCTCGGCGACATACCGGAGAGTTGCGTCGCCTGTGTTTTTCTTTACCTTACTCCGCCGGAGATTTGCAACCTCGCTCGCCTTAACAGGGCGTTTCGCGGCGCCGCCTCGTCGGATTCCGTTTGGGAATCGAAATTGCCCTCGAATTATCAAGATCTTCTCGATTTGTTGCCCCCTGAACGGTACCAAAATCTGTCAAAAAAGGATATATATGCTCTGCTATCTCGTCCGGTTCCATTCGATGATGGAAATAAGGAGGTGTGGCTGGATAGAATCACTGGAAGGATTTGCATGTCGATATCAGCAAAGGCCATGGCTATTACTGGAATTGATGATAGAAGATACTGGAATTGGATTCCTACTGAAGAGTCTCGGTTCAATGTTGTGGCATATCTGCAGCAAATTTGGTGGTTTGAAGTAGACGGGACGGTAAAATTCCCATTTCCTGCTGATATCTACACACTTACCTTCAGGCTTCACCTGGGGAGGTTCTATAAGCGGCTTGGTCGACGTGCATGCAGCTTCGAGCATACTCACGGTTGGGATGTAAAGCCAGTACGGTTCGAAATGTCTACTTCTGATGGACAGCAAGCAACACATGAATTCTGTTTAGACGAGCACAGGTTTATTGATGTAAGTGGACACCGTAAGCGCGGGTGTTGGATAGAATACAAGGTAGGTGAATTTTTGGTCGACAAGTCGGGATCAGCCACGGAAATTAGATTTTCCATGAAACAGATCGACTGCACGCATTCTAAAGGTGGGCTTTGTGTAGATTCTGTATTTATCGTTCCCAGTATCTTGAAAGAGCGTAAAAAATGA | 879 | 47.1 | MGASLSNLSDVANGSTIGPGLGDIPESCVACVFLYLTPPEICNLARLNRAFRGAASSDSVWESKLPSNYQDLLDLLPPERYQNLSKKDIYALLSRPVPFDDGNKEVWLDRITGRICMSISAKAMAITGIDDRRYWNWIPTEESRFNVVAYLQQIWWFEVDGTVKFPFPADIYTLTFRLHLGRFYKRLGRRACSFEHTHGWDVKPVRFEMSTSDGQQATHEFCLDEHRFIDVSGHRKRGCWIEYKVGEFLVDKSGSATEIRFSMKQIDCTHSKGGLCVDSVFIVPSILKERKK | 292 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 69909178 | 69912811 | + | Tan0006983.1 | Tan08g1792 | 761684 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g1792 | 292 | SUPERFAMILY | F-box domain | 7 | 91 | IPR036047 | GO:0005515(InterPro) | |
| Tan08g1792 | 292 | PANTHER | F-BOX PROTEIN PP2-A15 | 3 | 289 | - | - | |
| Tan08g1792 | 292 | CDD | F-box_AtSKIP3-like | 21 | 66 | - | - | |
| Tan08g1792 | 292 | ProSiteProfiles | F-box domain profile. | 18 | 64 | IPR001810 | GO:0005515(InterPro) | |
| Tan08g1792 | 292 | Pfam | F-box-like | 22 | 63 | IPR001810 | GO:0005515(InterPro) | |
| Tan08g1792 | 292 | Pfam | Phloem protein 2 | 115 | 284 | IPR025886 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan08g1792 | Tan-Chr8:69909178 | Tan10g0291 | Tan-Chr10:2480391 | 6.50E-82 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g1792 | - | - | - | 0.0 |