Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1798 ATGGCTTCGTCGAAGGAATTGAAGGAGGAGAGAGCAGAGGCGGCGGCGAGGCTTGCTGCTTCCGATCTGAGAGACGCCAACAGAGAAGAGAAGGAGCACGCGCCGCCGGTGGAGGTCACGGAGGTGGATCGGCCGGCGGTCCATGATCAGCAGCAGAGGACCGGCATGATCGGGTCGGTGTTGAAGGCGGTGCAAGACACTTACGAACACGCAAAGGAAGCGGTGGTCGGAAAGAGCCACGAAGCGGAGGAGAGAGGTCGAGAGGCGAAGGACAAGTCGGCGGAGAAAGCTAAAGAGACGACGGAGGCGGCGGTGGAGAAGGCCGGGGAGACAAAAGAAGCCGCTGGAGAGACGGCGGCATCAGCGAGTGGGAAAATGAGCGAGTATGGAGAGAAAGCAAGAGATAAGACCGGCGAGTATAAGGACTACACGGCGGAGAAAGCAAAGGAAACGAAGGATGCGGCAGCGAGAAAAGCAGGGGAATACAAAGATTACACGGCGGAGAAGATGACAGAGGCGACAGAATCCGCTAAAGGAAAGGCAGGGGAATATAAAGATTATGCGGCCGAGAAAGCGAAGGAAGCAAAGGATGCAGCTGCGAGAAAAGCAGGGGAATACAGAGATTACACGGCGGAGAAGACGACGGAGGCGACAGAATCCGCTAAAGGGAAGGCAGGGGAATATAAAGATTATGCCGCGGAGAAAGCGAGGGAAGCAAAAGATGCAGCAGCGAGAAAAGCAGGGGAATACAGAGATTACACGGCGGAGAAGACGAGAGAGGCAATGGAATCGGCAAAGGGGAAGGCAAATCAAGCAAAGGAGAAAGCGGGAGAGACGAAGGATGCCGCGGCGAGAAAAGCAGGGGAATGTAAAGACTATGCGGCGGAGAAGACAAGAGAGACGACGGACTACACGGCGGAGAAGGCAAGAGAAGGAAAGGACACGACGGTGAGTAAACTTGGGGGATTGAAAGATTCAGCGGCGGATGCAGCAAAGAGAGCCATGGGATTCTTGTCAGGAAAGAAAGAGGAAGAGACTAAAGAAGCCACAAAGGTAACTAAAAATTGTATTTTTAAAATCTGA 1083 53.83 MASSKELKEERAEAAARLAASDLRDANREEKEHAPPVEVTEVDRPAVHDQQQRTGMIGSVLKAVQDTYEHAKEAVVGKSHEAEERGREAKDKSAEKAKETTEAAVEKAGETKEAAGETAASASGKMSEYGEKARDKTGEYKDYTAEKAKETKDAAARKAGEYKDYTAEKMTEATESAKGKAGEYKDYAAEKAKEAKDAAARKAGEYRDYTAEKTTEATESAKGKAGEYKDYAAEKAREAKDAAARKAGEYRDYTAEKTREAMESAKGKANQAKEKAGETKDAAARKAGECKDYAAEKTRETTDYTAEKAREGKDTTVSKLGGLKDSAADAAKRAMGFLSGKKEEETKEATKVTKNCIFKI 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 69951814 69953633 - Tan0006779.3 Tan08g1798 761690

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1798 360 MobiDBLite consensus disorder prediction 128 158 - -
Tan08g1798 360 MobiDBLite consensus disorder prediction 258 320 - -
Tan08g1798 360 MobiDBLite consensus disorder prediction 72 158 - -
Tan08g1798 360 MobiDBLite consensus disorder prediction 1 48 - -
Tan08g1798 360 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 1 199 - -
Tan08g1798 360 Gene3D - 270 328 - -
Tan08g1798 360 Gene3D - 127 179 - -
Tan08g1798 360 Gene3D - 206 269 - -
Tan08g1798 360 MobiDBLite consensus disorder prediction 1 55 - -
Tan08g1798 360 MobiDBLite consensus disorder prediction 72 113 - -
Tan08g1798 360 Coils Coil 255 282 - -
Tan08g1798 360 Coils Coil 9 29 - -
Tan08g1798 360 MobiDBLite consensus disorder prediction 258 318 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1798 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1796 Tan-Chr8:69951814 Tan08g1798 Tan-Chr8:69951814 1.70E-49 dispersed
Tan08g1797 Tan-Chr8:69951814 Tan08g1798 Tan-Chr8:69951814 1.50E-49 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g1071 . . . . . . . . . Cmo14g00246 . . . . . . . . . . . . . . . . . . . . . . . Cone13ag1225 Cone19ag1211 . . . Cme04g02451 . . Bda03g01693 . . . . . . . . . Cma14g00255 . Car14g00233 Cpe03g00222 . Bhi11g02005 Tan08g1798 . . Hepe05g0322 . . Cla10g01859 Cam10g1914 Cec10g1969 Cco10g1942 Clacu10g1931 Cmu10g2675 Cre10g2063 Lsi03g01955 Csa03g03358 Chy04g01984 .