Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1802 ATGGAGCTCTTTCTTCTTCCTTCCTACAAACAAAACCCCACTATCCACAAGCCCCTTAACCCCTTCGCCATTATCGGGAAGAGACGGCCATCTCTTTTCCCTTGTCGATGCTCATTATCGTCCTCACATGAGGAATCTTCAGACCAAGCCAAAGAATCGCTGCGGTGCGAGGGAAGGAGGGCATTGATTGGTTCTTTCCTGTCGACGGCTGCCGGTTTATATTTCTGTAATGTAGCCGAGGCTGTTAGCACAAGTAGAAGGGCTCTAAGAGGAGCAAAAATACCTGAAAGTGAGTTTACAACTCTCCCAAATGGTCTGAAGTACTATGATTTGAAGGTTGGAGGAGGAACTAAGGCTGTGATTGGATCCCGTGTTGCAGTTCACTATGTGGCTAAATGGAGAGGGATCACATTTATGACAAGTAGACAAGGGCTTGGTGTTGGTGGAGGAACGCCTTATGGATTTGATGTAGGCCAATCAGAAAGAGGAACAGTCCTCAAAGGATTGGATCTAGGTGTTCAAGGCATGAGGGTTGGAGGCCAGAGATTGCTTATAGTTCCTCCTGAATTAGCTTATGGAAGCAAAGGGGTTCAGGAAATTCCTCCAAATGCAACAATAGAGTTGGATGTGGAATTGCTTTCCATCAAACAAAGTCCATTTGGTCCCTGCTGCTATTCGCAGAAAACCTGCCCAAGCTGTGGCCCCATTGAAGTTCCCTATCCTCTGAGCACCAATCCCAACTGTGGTGACTTAGACTATACTCTCCGCTGTGATTCTCATTCACAGAAACTCTACTTTGATGCACTCAATGGAAGTTCGTATCCCGTCCTCAAAATCAACGCTTCAAGTCAACGTATGGTGATCCAAGCATCGCCATGGGTTCCTGGCTCCTGTGTTACTCAAGACATGTTGGTCAGTGAAGGCCTGTGGTTAAACCAATCACTCCCTTTTAACATCACTTCATCAAATACAATTTTCCTCTTGAACTGTTCTCCTCGCCTGCTAGTCTCACCGCTCAATTGTACTCCTTCAAGTCTCTGTCACTGCTACTTGGCAAGTTCAGGACGAGTTGATGGAAAAAGAGCATTTCAGTGTGCTAGTGTTCTTGACCCTTGCTGTACCTTCATCCCTGGTGGGATGCCCTCAGCATATAAGATAAGGCTTCATAACTCAGGCTGTAGAGCACTCAGGAGCATCCTTCATCTAGATGTAGGAAAGCCTGCAAATCAATGGGAGGAAGGTTTGGAAATTCAATGGGCTACTCCACCTGAACCAATCTGTAGAACTCAATCTGATTGCACTGGAGCATCGGATTGTCTTCCTACTGGTGGATCCAACAGCCGTTCTCGTTGTCTTTGCAGAAGGAGCTACTATTGGGATCATATTCTTGGAACATGCCTGAGAATGAATAGGAAGAGCATGGTTGGACTCAGTATAAAGCTCTCGGTATGTCTGGTTTCCTTTTCCATTCTAGCTGCAATTATAGCTCTAATTACAGTCAGGAAGTTCAGAACTTTCAGTAAGCAGGAAAAGCTCTGTAAAGAAAGAGAAGATGTGTTGAATTTCAGCAATGGTGGCAGACCAGCCAGAATGTTTCATCTGAAAGAGATGAAGAAAGCAACAAATGAATTTTCGAAAGACAGGGTGTTGGGCAGCGGTGGCTTCGGGGAAGTTTACAAAGGTGAACTTCAAGATGGCACCGTCGTAGCTGTGAAATCGGCTAGAGTGGGCAATCTAAAGAGCATCAAGCAAATACTCAACGAAGTTGGAATACTATCTCAAGTAAATCACAAGAATCTTGTGAAACTTATAGGTTGCTGTGTAGAAACTGAGCAACCATTGATGATATATGAATTCATTTCCAATGGCACCCTCCATGACCATTTACATGGTAAGTTTCCCACTTTCTTGGACTGGAGAAAAAGGCTAAAAGTTGCTTCACAAACTGCTGAAGCATTAGCTTATTTGCATTCAGCTGCATACCCTCCCATCTATCATAGAGATGTGAAGTCAACAAACATACTCTTGGATGACAACTTCAATGCTAAAGTTGCAGATTTTGGACTTTCTAGATTGGCTTTGCCAGGAATAAGCCATGTTTCAACTTGTGCTCAGGGTACATTAGGTTACTTAGACCCAGAATACTATCGAAATTACCAATTAACTGATAAAAGTGATGTGTATAGTTTTGGGGTCGTCCTGCTTGAACTTTTAACCTCTCAGAAGGCTATAGATTTCACAAGAGACGAAGATAGTGTCAATCTAGCAATCTATGTGATCCAACAAGTGCACAATGGTGCATTCATAGACACCATCGATAAACAGCTACTCAGTGATGATCCATCCAGCAATAAACTGATCAGTTTGAAGCACTTCTTGGAGCTCGCACTCGCCTGTTTGAGGGAGAAGAAGGCGGAAAGGCCTTGCATGAAGGATGTACTCCAAGAACTTGAATACGTAACTCAGATATTGGACAATACAGAAACAGTTGCTGAAGAAGGTAAATCTCAAAAAGTCTTAGAAGTTTAA 2529 43.69 MELFLLPSYKQNPTIHKPLNPFAIIGKRRPSLFPCRCSLSSSHEESSDQAKESLRCEGRRALIGSFLSTAAGLYFCNVAEAVSTSRRALRGAKIPESEFTTLPNGLKYYDLKVGGGTKAVIGSRVAVHYVAKWRGITFMTSRQGLGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNATIELDVELLSIKQSPFGPCCYSQKTCPSCGPIEVPYPLSTNPNCGDLDYTLRCDSHSQKLYFDALNGSSYPVLKINASSQRMVIQASPWVPGSCVTQDMLVSEGLWLNQSLPFNITSSNTIFLLNCSPRLLVSPLNCTPSSLCHCYLASSGRVDGKRAFQCASVLDPCCTFIPGGMPSAYKIRLHNSGCRALRSILHLDVGKPANQWEEGLEIQWATPPEPICRTQSDCTGASDCLPTGGSNSRSRCLCRRSYYWDHILGTCLRMNRKSMVGLSIKLSVCLVSFSILAAIIALITVRKFRTFSKQEKLCKEREDVLNFSNGGRPARMFHLKEMKKATNEFSKDRVLGSGGFGEVYKGELQDGTVVAVKSARVGNLKSIKQILNEVGILSQVNHKNLVKLIGCCVETEQPLMIYEFISNGTLHDHLHGKFPTFLDWRKRLKVASQTAEALAYLHSAAYPPIYHRDVKSTNILLDDNFNAKVADFGLSRLALPGISHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFTRDEDSVNLAIYVIQQVHNGAFIDTIDKQLLSDDPSSNKLISLKHFLELALACLREKKAERPCMKDVLQELEYVTQILDNTETVAEEGKSQKVLEV 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 69989573 69996301 + Tan0017389.1 Tan08g1802 761694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1802 842 Pfam Wall-associated receptor kinase galacturonan-binding 230 288 IPR025287 GO:0030247(InterPro)
Tan08g1802 842 SMART serkin_6 544 820 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1802 842 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 122 216 IPR001179 GO:0003755(InterPro)
Tan08g1802 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 664 676 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1802 842 SUPERFAMILY Protein kinase-like (PK-like) 523 820 IPR011009 -
Tan08g1802 842 Gene3D Transferase(Phosphotransferase) domain 1 620 839 - -
Tan08g1802 842 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 517 619 - -
Tan08g1802 842 ProSitePatterns Protein kinases ATP-binding region signature. 550 572 IPR017441 GO:0005524(InterPro)
Tan08g1802 842 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 226 822 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Tan08g1802 842 FunFam Wall-associated receptor kinase-like 20 620 830 - -
Tan08g1802 842 Gene3D - 78 219 IPR046357 GO:0003755(InterPro)
Tan08g1802 842 ProSiteProfiles Protein kinase domain profile. 544 820 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1802 842 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 117 213 IPR001179 GO:0003755(InterPro)
Tan08g1802 842 Gene3D Phosphorylase Kinase; domain 1 504 619 - -
Tan08g1802 842 Pfam Protein tyrosine and serine/threonine kinase 546 817 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1802 842 CDD STKc_IRAK 550 818 - -
Tan08g1802 842 SUPERFAMILY FKBP-like 93 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5133 Tan-Chr1:116650534 Tan08g1802 Tan-Chr8:69989573 1.10E-23 dispersed
Tan01g5134 Tan-Chr1:116650534 Tan08g1802 Tan-Chr8:69989573 1.10E-23 dispersed
Tan05g2199 Tan-Chr5:72946444 Tan08g1802 Tan-Chr8:69989573 1.30E-14 dispersed
Tan08g1802 Tan-Chr8:69989573 Tan11g0213 Tan-Chr11:1784671 2.60E-168 dispersed
Tan10g0060 Tan-Chr10:937874 Tan08g1802 Tan-Chr8:69989573 1.00E-06 dispersed
Tan08g1802 Tan-Chr8:69989573 Tan01g3290 Tan-Chr1:88338933 8.70E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67962 PF07714 PK_Tyr_Ser-Thr 5.70E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1802 - - - 0.0