Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1857 ATGGCGATCACGATGGGCAAATCTTTCGATCCCAAAACCCAGATTTACACTTCCCCTCGTCCCCCAATCCATTTTCCGACCGACCCATCAATCTCCATTGCTTCATTCCTCTTTCAGAACTCCTCCTCTTACCCTCACGCCCTCGCCCTCGCCGACTCCGATTCCGGCGAATCCCTGACCTTCCGTCAGCTTGAAATCCGAGTCTCCAAGTTAGCACATATCTTCATCCAACTTGGGATTCGAAAAGGCGACGTGGTTCTCATATTCGCGCCTAATTCCATTCATTTCCCTGTTTGTTTTTTCTCCATTGTCGCCATTGGAGCCATCGCCACCACTTGTAATCCAGCTTACACCTTCGGGGAACTGTCAAAGCAAGTCCAAAACTGCAACCCCAAGCTCGTAATCACCGTTCCCGAACTCTGGGACGTAATCGGTAAACTCAACTTGCCTTCTATAATTCTGGGTTCTGAAATTTCTTCGAAATTTTCCCGTCCCAACATCTGGGGTTACTCCGATTTGATTAAAAAAGCCGGCGACGTGTCCAATTTTCCGGCGAGTGAAGTGGGTCAGAACGATGTAGCGGCTCTTTTGTATTCATCTGGGACGACGGGGATTAGCAAGGGAGTGATTCTGACTCACAGGAACTTCATAGCGGCGGCGTTAATGGTGTCTCATGATCAGAACCTTACTGGTGATCCTAGAAACGTGTTTTTGTGCTTTCTTCCAATGTTCCATGTCTTTGGTCTCTCTGTGATTCTTTACTCACAGCTTCAAAGAGGAAACACCGTCGTTTCAATGGCGAAGTTTGAGCTAGAAAAGGCTTTGCAGGTGGTGGTGAAGTACAAGATCACTCATCTGTATCTTGTTCCTCCTGTAATTATAGCTCTGACGAAGCAAAGTGTAGTGAAGAAGTACGATTTGTCTTCGTTGAAGGAGATTTTGTCTGGGGCGGCGCCTCTTGGTAAGGATGTGATGGAAGAATGCTCTAAGATTCTACCTCAGACCAAGATCAAACAGGGATATGGTATGACAGAAACTTGTGGAGTTATTGCACTGGAGAATCTGGGGTTAGAATCTACGCTATCTGGGGCAGCTGGAATCCTTGTTTCAGGAGTTGAAGCCCAAATTTTGAGTACAGAAAGTCAGAAACGTCTTCCACCAGGTGAAACAGGGGAAATATGTGTCCGAGGACCAAATATGATGAAAGGGTACTTCAACAATCAGAAAGCCACCAGCGAAACCATAGATGATCAAGGATGGGTACGCACTGGAGATATTGGATATTTCAATGAAGGAGGAGAATTATTTGTTGTGGACAGAATCAAAGAACTCATCAAGTGTTATGGTTTTCAGGTTGCACCAGCGGAGCTTGAAGCACTGCTACTTTCCCACCCTCAAATTGTAGATGCCATTGTGATCCCATATCCTGATGATAAAGCCGGTGAGGTCCCTATCGCATTTGTTGTTCGTTCGCCTAATAGTTCGATAAAGGAAGAAGATGTTCAAAATTTTGTTGCAGGGCAGGTTGCACCATACAAGAGATTAAAAAGAGTAACCTTCACGAGTAGTGTTCCGAAGTCGGTTTCGGGAAAACTTCTAAGAAGGGAGCTCATAGCACAAGTCCGCGCCAAGATGTAG 1638 45.91 MAITMGKSFDPKTQIYTSPRPPIHFPTDPSISIASFLFQNSSSYPHALALADSDSGESLTFRQLEIRVSKLAHIFIQLGIRKGDVVLIFAPNSIHFPVCFFSIVAIGAIATTCNPAYTFGELSKQVQNCNPKLVITVPELWDVIGKLNLPSIILGSEISSKFSRPNIWGYSDLIKKAGDVSNFPASEVGQNDVAALLYSSGTTGISKGVILTHRNFIAAALMVSHDQNLTGDPRNVFLCFLPMFHVFGLSVILYSQLQRGNTVVSMAKFELEKALQVVVKYKITHLYLVPPVIIALTKQSVVKKYDLSSLKEILSGAAPLGKDVMEECSKILPQTKIKQGYGMTETCGVIALENLGLESTLSGAAGILVSGVEAQILSTESQKRLPPGETGEICVRGPNMMKGYFNNQKATSETIDDQGWVRTGDIGYFNEGGELFVVDRIKELIKCYGFQVAPAELEALLLSHPQIVDAIVIPYPDDKAGEVPIAFVVRSPNSSIKEEDVQNFVAGQVAPYKRLKRVTFTSSVPKSVSGKLLRRELIAQVRAKM 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 70812704 70817213 + Tan0016461.1 Tan08g1857 761749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1857 545 CDD 4CL 25 537 - -
Tan08g1857 545 Gene3D - 443 544 IPR045851 -
Tan08g1857 545 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Tan08g1857 545 Pfam AMP-binding enzyme 39 405 IPR000873 -
Tan08g1857 545 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
Tan08g1857 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 537 - GO:0016405(PANTHER)
Tan08g1857 545 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 442 - -
Tan08g1857 545 Gene3D - 14 442 IPR042099 -
Tan08g1857 545 FunFam 4-coumarate--CoA ligase 2 443 544 - -
Tan08g1857 545 SUPERFAMILY Acetyl-CoA synthetase-like 16 543 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2666 Tan-Chr1:43676320 Tan08g1857 Tan-Chr8:70812704 2.60E-193 dispersed
Tan03g2786 Tan-Chr3:80859236 Tan08g1857 Tan-Chr8:70812704 5.40E-28 dispersed
Tan05g2932 Tan-Chr5:81528263 Tan08g1857 Tan-Chr8:70812704 1.50E-102 dispersed
Tan07g1664 Tan-Chr7:68015406 Tan08g1857 Tan-Chr8:70812704 1.90E-52 dispersed
Tan07g1665 Tan-Chr7:68015406 Tan08g1857 Tan-Chr8:70812704 7.60E-45 dispersed
Tan07g2039 Tan-Chr7:71948170 Tan08g1857 Tan-Chr8:70812704 2.70E-108 dispersed
Tan08g0792 Tan-Chr8:8784211 Tan08g1857 Tan-Chr8:70812704 5.20E-59 dispersed
Tan08g1857 Tan-Chr8:70812704 Tan09g1675 Tan-Chr9:68378870 1.30E-99 dispersed
Tan08g1857 Tan-Chr8:70812704 Tan08g1858 Tan-Chr8:70812704 1.40E-258 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1857 K01904 - csv:101204417 944.11