Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1858 ATGGCGATCACGATGGGCAAATCTTTCGATCCCAAAACCCAGATTTACACTTCCCCTCGTCCCCCAATCCATTTTCCGACCGACCCATCAATCTCCATTGCTTCATTCCTCTTTCAGAACTCCTCCTCTTACCCTCACGCCCTCGCCCTCGCCGACTCCGATTCCGGCGAATCCCTGACCTTCCGTCAGCTTGAAATCCGAGTCTCCAAGTTAGCACATATCTTCATCCAACTTGGGATTCGAAAAGGCGACGTGGTTCTCATATTCGCGCCTAATTCCATTCATTTCCCTGTTTGTTTTTTCTCCATTGTCGCCATTGGAGCCATCGCCACCACTTGTAATCCAGCTTACACCTTCGGGGAACTGTCAAAGCAAGTCCAAAACTGCAACCCCAAGCTCGTAATCACCGTTCCCGAACTCTGGGACGTAATCGGTAAACTCAACTTGCCTTCTATAATTCTGGGTTCTGAAATTTCTTCGAAATTTTCCCGTCCCAACATCTGGGGTTACTCCGATTTGATTAAAAAAGCCGGCGACGTGTCCAATTTTCCGGCGAGTGAAGTGGGTCAGAACGATGTAGCGGCTCTTTTGTATTCATCTGGGACGACGGGGATTAGCAAGGGAGTGATTCTGACTCACAGGAACTTCATAGCGGCGGCGTTAATGGTGTCTCATGATCAGAACCTTACTGGTGATCCTAGAAACGTGTTTTTGTGCTTTCTTCCAATGTTCCATGTCTTTGGTCTCTCTGTGATTCTTTACTCACAGCTTCAAAGAGGAAACACCGTCGTTTCAATGGCGAAGTTTGAGCTAGAAAAGGCTTTGCAGGTGGTGGTGAAGTACAAGATCACTCATCTGTATCTTGTTCCTCCTGTAATTATAGCTCTGACGAAGCAAAGTGTAGTGAAGAAGTACGATTTGTCTTCGTTGAAGGAGATTTTGTCTGGGGCGGCGCCTCTTGGTAAGGATGTGATGGAAGAATGCTCTAAGATTCTACCTCAGACCAAGATCAAACAGGGATATGGTATGACAGAAACTTGTGGAGTTATTGCACTGGAGAATCTGGGGTTAGAATCTACGCTATCTGGGGCAGCTGGAATCCTTGTTTCAGGAGTTGAAGCCCAAATTTTGAGTACAGAAAGTCAGAAACGTCTTCCACCAGGTGAAACAGGGGAAATATGTGTCCGAGGACCAAATATGATGAAAGGGTACTTCAACAATCAGAAAGCCACCAGCGAAACCATAGATGATCAAGGATGGGTACGCACTGGAGATATTGGATATTTCAATGAAGGAGGAGAATTATTTGTTGTGGACAGAATCAAAGAACTCATCAAGTGTTATGGTTTTCAGGTTCTGTTTTTCATAATCAAATATAAGCTTTTCCATTTGGGAGTTCTTTATTTCCTTTATTAG 1416 45.13 MAITMGKSFDPKTQIYTSPRPPIHFPTDPSISIASFLFQNSSSYPHALALADSDSGESLTFRQLEIRVSKLAHIFIQLGIRKGDVVLIFAPNSIHFPVCFFSIVAIGAIATTCNPAYTFGELSKQVQNCNPKLVITVPELWDVIGKLNLPSIILGSEISSKFSRPNIWGYSDLIKKAGDVSNFPASEVGQNDVAALLYSSGTTGISKGVILTHRNFIAAALMVSHDQNLTGDPRNVFLCFLPMFHVFGLSVILYSQLQRGNTVVSMAKFELEKALQVVVKYKITHLYLVPPVIIALTKQSVVKKYDLSSLKEILSGAAPLGKDVMEECSKILPQTKIKQGYGMTETCGVIALENLGLESTLSGAAGILVSGVEAQILSTESQKRLPPGETGEICVRGPNMMKGYFNNQKATSETIDDQGWVRTGDIGYFNEGGELFVVDRIKELIKCYGFQVLFFIIKYKLFHLGVLYFLY 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 70812704 70817213 + Tan0016461.2 Tan08g1858 761750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1858 471 Gene3D - 14 443 IPR042099 -
Tan08g1858 471 SUPERFAMILY Acetyl-CoA synthetase-like 16 454 - -
Tan08g1858 471 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 442 - -
Tan08g1858 471 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Tan08g1858 471 Pfam AMP-binding enzyme 39 405 IPR000873 -
Tan08g1858 471 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 452 - GO:0016405(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1858 Tan-Chr8:70812704 Tan09g1675 Tan-Chr9:68378870 4.90E-71 dispersed
Tan08g1857 Tan-Chr8:70812704 Tan08g1858 Tan-Chr8:70812704 1.40E-258 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1858 K01904 - csv:101204417 785.408