Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1860 ATGTCACAAGATTCTGAGGAGATAAAGACGATTGAGCAGTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTCGTCTCTTCTGATCCTCCTCCTACTTCTCTTGACCCGTTTATAACCAGCAACCCATCAGCCCCAACAGCGAAACTCAAAGACCTTGAAGGCCTCAGCCCCAAAGTGGAGGCTCAAGACGGAATTGACAGAGCCACAAACGGAGAAATGGAGTCTACAAGTGATTCCAAGAAGGAAAACGGCGGTGGCACCAGTGGGGAGAAGCCTGAGGCTGTCGCCGCCGTTGGGTTTGGGGAGCTTTTCAGATTCGCCGATGGGTTGGATTACGTTTTGATGGCAATTGGGTCGGTTGGAGCCCTCGTTCATGGTTGTTCTCTGCCTCTGTTTCTTCGATTCTTTGCCGATCTTGTTAACTCTTTTGGGTCTTACGCCAATGATGTGGATAAAATGATGCAGGAGGTTTTGAAGTACGCATTCTACTTTCTCGTGGTTGGAGCTGCTATATGGGCGTCATCCTGGGCAGAGATTTCGTGTTGGATGTGGACCGGCGAGCGGCAGTCCACAAAGATGAGGATCAAGTACCTAGAAGCAGCACTGGACCAGGACATTCAGTATTTTGATACAGAGGTGCGAACATCTGATGTCGTTTTCGCCATCAACACTGATGCAGTGATGGTCCAAGACGCCATTAGTGAGAAGCTGGGCAACTTCATCCACTATATGGCAACATTTGTTTCCGGATTCGTTGTGGGTTTCACAGCTGTGTGGCAATTGGCTTTGGTAACTCTTGCGGTGGTTCCTCTGATTGCCGTAATCGGCGGCATCTACACCACCACGATAGCCAAGCTCACTGCCAAGACCCAGGAAGCTCTTTCAGAAGCTGGGAATATCGTCGAACAGACAATAGTTCAAATTCGAGTTGTTTTTGCTTTCGTCGGCGAATCAAGAGCATTACAGAGGTACTCCTCTGCATTGAAGATTTCTCAAAGGATAGGTTACAAGAGTGGATTCTCCAAGGGTATGGGATTGGGCGCCACTTACTTTGTTGTTTTCTGCTGTTACGCTCTTCTGCTCTGGTACGGAGGTTATCTTGTTAGACACCACGCCACCAATGGCGGTCTCGCCATAGCCACCATGTTTGCAGTGATGATTGGCGGACTGGCATTGGGGCAATCTGCTCCGAGCATGAGTTCATTCGCAAAGGCTAAAGTTGCAGCTGCCAAAATCTACCGCATAATCGACCATAAGCCCACTCTAAACCGCAACAACGAATCTGGCTTGGAATTAGAGTCGGTTTCGGGACTGGTTGAGCTAAAGAATGTAGATTTCTCATACCCATCAAGGCCAGATGTAAAAATCCTCAACAACTTCTCCCTAACAGTCCCTGCCGGAAAAACTATAGCTCTGGTCGGTAGCAGTGGCTCCGGCAAGAGCACCGTCGTCTCCCTAATTGAAAGATTCTATGATCCCATTTCAGGTGAAGTTCTACTAGATGGCCGTGACATAAAAACTTTGAAGCTAAAATGGTTAAGGCAGCAGATAGGGCTGGTGAGCCAAGAACCTGCTCTTTTTGCCACCACCATCAAGGAGAATATTCTCTTGGGCAGACCTGATGCAGACCAAGTTGAGGTGGAGGAAGCTGCTCGAGTCGCCAATGCTCATTCATTCATTATCAAACTTCCTGAAGGCTATGACACCCAGGTAGGAGAAAGAGGACTGCAGCTGTCTGGGGGGCAGAAGCAGAGGATTGCAATAGCAAGGGCAATGCTGAAAAACCCTGCGATCTTACTCTTAGATGAGGCAACCAGTGCATTGGACTCTGAGTCAGAAAAGCTTGTACAGGAGGCCCTGGATCGTTTCATGATCGGGCGGACCACTCTTGTTATTGCCCATCGTCTCTCTACCATTCGCAAGGCTGACCTTGTGGCTGTACTCCAACAAGGAAGTGTTTCTGAAATAGGAACACATGACGAGCTCATTGCTAAAGGAGAGAATGGTGTATATGCCAAGCTCATCCGAATGCAGGAGATGGCACATGAAACTGCTCTCAATAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCCAGGAACTCAGTGAGCTCCCCAATAATTGCACGGAATTCTTCCTATGGACGATCGCCATATTCACGTCGGTTATCTGACTTCTCCACATCTGATTTTAGTCTTTCTCTGGATGCTTCACTTCCCAATTACAGGCTTGAAAAACTTCCCTTTAAGGAGCAGGCCAGTTCCTTTTGGCGTCTAGTGAAAATGAATTCACCCGAATGGCTCTATGCATTACTTGGTTCTATTGGTTCTGTTGTTTGTGGGTTTTTAAGTGCCTTCTTCGCATACGTTCTAAGTGCTGTTCTCAGTGTCTATTACAACCCAGACCATGCTTTCATGAGCAGAGAAATTATTAAGTACTGCTACTTATTGATCGGACTTTCATCAGCTGCTCTCCTCTTCAATACAATACAGCATTTCTTCTGGGATATTGTGGGAGAGAACCTCACGAAACGTGTAAGAGAGAAGATGCTGACAGCAGTACTTAAAAATGAAATGGCATGGTTTGACCAGGAAGAAAATGAGAGTGCCAAGATTGCTGCAAGGCTGGCCCTCGACGCTAACAATGTCAGATCAGCCATTGGAGACAGGATCTCTGTGATTGTACAGAACACATCACTCATGCTAGTTGCATGCACTGCTGGATTCGTTTTGCAGTGGCGCCTCTCTCTTGTCCTTGTAGCCGTCTTCCCTGTGGTTGTTGCGGCCACCGTTCTACAGAAAATGTTCATGACTGGTTTTTCAGGAGACCTTGAGGCCAACCATGCCAAGGCCACACAACTAGCAGGGGAGGCCATAGCCAATGTGAGGACTGTTGCTGCGTTCAACTCAGAGGAAAAGATTGTCAGACTTTTCTCAACCAACCTCGAGATCCCACTACGACGCTGCTTTTGGAAGGGGCAGATTGCGGGTAGTGGATTCGGTGTTGCTCAGTTCTCTCTTTATGCTTCCTATGCCCTAGGTCTCTGGTATGCCTCATGGCTTGTGAAGCATGGGCTCTCTGATTTTTCAAAGGCAATCCGTGTTTTCATGGTCCTTATGGTTTCTGCAAATGGCGCAGCTGAAACACTCACTCTTGCCCCTGATTTTATTAAGGGTGGGCGAGCTATGCGTTCAGTCTTTGCCCTTCTTGACCGCAAAACTGAAATTGAACCTGATGATCCAGATGCCACCCCAGTCCCAGATAAACTTCGTGGAGAAGTTGAATTTAAACATGTTGACTTTTCCTACCCAACTCGTCCTGATATCCCTGTCTTCAGAGACCTTAGTTTGCGTGCCCGAGCAGGTAAGACTCTTGCTCTTGTTGGCCCTAGCGGGTGTGGCAAGAGCTCTGTTATTGCACTAGTCCAAAGATTCTATGAGCCATCATCAGGACGAGTTATGATAGATGGAAAGGATATTCGTAAGTTCAATCTCAAGTCCCTGAGAAAGCACATTGCAATGGTCCCTCAGGAGCCATGCTTATTTGCTGCTTCCATATATGATAATATAGCTTATGGCCATGAATCAGCTACTGAGGCCGAGATCGTTGAAGCTGCTACTTTGGCGAATGCTCATAAGTTCGTATCTGCATTGCCAGAAGGATATAAAACTTTTGTTGGGGAGAGGGGAGTTCAACTATCAGGTGGACAGAAACAAAGAATTGCAATTGCCCGTGCTCTGATCAGGAAGACAGAGCTTATGCTACTAGATGAGGCAACAAGTGCACTCGATGCTGAGTCTGAGCGATCCGTCCAGGAGGCTCTTGACCGAGCTTGTTCAGGAAAAACAACAATCGTAGTTGCTCATCGACTATCAACGATCAGGAATGCTCACGTCATTGCAGTGATTGATGACGGTAAAGTTGCAGAGCAGGGATCACACTCACATTTGTTGAAAAATTATCCTGATGGGTGTTACGCCCGGATGATACAATTACAAAGATTCACACACAGCCAAGTCATTGGTATGACTTCAGGTTCAACTTCCTCAGCAAGAACTAGAGAGGATGAGGATAGAGAGAGCTAG 4086 47.33 MSQDSEEIKTIEQWKWSEMQGLELVSSDPPPTSLDPFITSNPSAPTAKLKDLEGLSPKVEAQDGIDRATNGEMESTSDSKKENGGGTSGEKPEAVAAVGFGELFRFADGLDYVLMAIGSVGALVHGCSLPLFLRFFADLVNSFGSYANDVDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALDQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGGIYTTTIAKLTAKTQEALSEAGNIVEQTIVQIRVVFAFVGESRALQRYSSALKISQRIGYKSGFSKGMGLGATYFVVFCCYALLLWYGGYLVRHHATNGGLAIATMFAVMIGGLALGQSAPSMSSFAKAKVAAAKIYRIIDHKPTLNRNNESGLELESVSGLVELKNVDFSYPSRPDVKILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPISGEVLLDGRDIKTLKLKWLRQQIGLVSQEPALFATTIKENILLGRPDADQVEVEEAARVANAHSFIIKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASLPNYRLEKLPFKEQASSFWRLVKMNSPEWLYALLGSIGSVVCGFLSAFFAYVLSAVLSVYYNPDHAFMSREIIKYCYLLIGLSSAALLFNTIQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESAKIAARLALDANNVRSAIGDRISVIVQNTSLMLVACTAGFVLQWRLSLVLVAVFPVVVAATVLQKMFMTGFSGDLEANHAKATQLAGEAIANVRTVAAFNSEEKIVRLFSTNLEIPLRRCFWKGQIAGSGFGVAQFSLYASYALGLWYASWLVKHGLSDFSKAIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFALLDRKTEIEPDDPDATPVPDKLRGEVEFKHVDFSYPTRPDIPVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKFNLKSLRKHIAMVPQEPCLFAASIYDNIAYGHESATEAEIVEAATLANAHKFVSALPEGYKTFVGERGVQLSGGQKQRIAIARALIRKTELMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEDRES 1361
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 70858074 70865176 + Tan0003514.1 Tan08g1860 761752
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1860 1361 CDD ABC_MTABC3_MDL1_MDL2 1094 1333 - -
Tan08g1860 1361 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1094 1330 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan08g1860 1361 Gene3D ABC transporter type 1, transmembrane domain 102 691 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan08g1860 1361 PANTHER ABC TRANSPORTER B FAMILY 74 703 IPR039421 GO:0005887(PANTHER)|GO:0042626(PANTHER)
Tan08g1860 1361 FunFam ABC transporter B family member 19 1060 1082 - -
Tan08g1860 1361 SUPERFAMILY ABC transporter transmembrane region 103 417 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan08g1860 1361 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 439 675 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan08g1860 1361 MobiDBLite consensus disorder prediction 21 91 - -
Tan08g1860 1361 MobiDBLite consensus disorder prediction 1341 1361 - -
Tan08g1860 1361 FunFam ABC transporter B family member 1 1084 1334 - -
Tan08g1860 1361 CDD ABC_6TM_Pgp_ABCB1_D2_like 761 1076 - -
Tan08g1860 1361 ProSitePatterns ABC transporters family signature. 578 592 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan08g1860 1361 MobiDBLite consensus disorder prediction 73 87 - -
Tan08g1860 1361 FunFam ABC transporter B family member 1 429 679 - -
Tan08g1860 1361 CDD ABC_MTABC3_MDL1_MDL2 439 678 - -
Tan08g1860 1361 Gene3D - 429 679 IPR027417 -
Tan08g1860 1361 Gene3D - 1083 1334 IPR027417 -
Tan08g1860 1361 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 771 1058 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Tan08g1860 1361 Pfam ABC transporter 1113 1261 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan08g1860 1361 ProSitePatterns ABC transporters family signature. 1233 1247 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan08g1860 1361 Gene3D ABC transporter type 1, transmembrane domain 1060 1337 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan08g1860 1361 SMART AAA_5 466 652 IPR003593 GO:0016887(InterPro)
Tan08g1860 1361 SMART AAA_5 1121 1313 IPR003593 GO:0016887(InterPro)
Tan08g1860 1361 Pfam ABC transporter transmembrane region 773 1041 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Tan08g1860 1361 Pfam ABC transporter transmembrane region 117 388 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Tan08g1860 1361 Gene3D ABC transporter type 1, transmembrane domain 751 1059 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan08g1860 1361 SUPERFAMILY ABC transporter transmembrane region 758 1080 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan08g1860 1361 Pfam ABC transporter 457 606 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan08g1860 1361 CDD ABC_6TM_Pgp_ABCB1_D1_like 115 402 - -
Tan08g1860 1361 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 116 404 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Tan08g1860 1361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1085 1333 IPR027417 -
Tan08g1860 1361 MobiDBLite consensus disorder prediction 32 46 - -
Tan08g1860 1361 FunFam ABC transporter B family member 1 750 1059 - -
Tan08g1860 1361 FunFam ABC transporter B family member 1 102 437 - -
Tan08g1860 1361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 430 678 IPR027417 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1860 Tan-Chr8:70858074 Tan11g0771 Tan-Chr11:6490221 2.80E-276 dispersed
Tan01g4511 Tan-Chr1:110767615 Tan08g1860 Tan-Chr8:70858074 8.70E-277 transposed
Tan01g5038 Tan-Chr1:115959953 Tan08g1860 Tan-Chr8:70858074 1.10E-284 transposed
Tan03g2636 Tan-Chr3:79542524 Tan08g1860 Tan-Chr8:70858074 7.40E-292 transposed
Tan04g0133 Tan-Chr4:865122 Tan08g1860 Tan-Chr8:70858074 1.30E-249 transposed
Tan05g0565 Tan-Chr5:4005822 Tan08g1860 Tan-Chr8:70858074 2.90E-12 transposed
Tan05g1552 Tan-Chr5:33886509 Tan08g1860 Tan-Chr8:70858074 4.90E-256 transposed
Tan05g2344 Tan-Chr5:74888178 Tan08g1860 Tan-Chr8:70858074 3.10E-89 transposed
Tan07g0256 Tan-Chr7:5530315 Tan08g1860 Tan-Chr8:70858074 6.50E-72 transposed
Tan08g1711 Tan-Chr8:68859594 Tan08g1860 Tan-Chr8:70858074 1.10E-57 transposed
Tan09g1216 Tan-Chr9:64505621 Tan08g1860 Tan-Chr8:70858074 4.00E-274 transposed
Tan11g0522 Tan-Chr11:4464064 Tan08g1860 Tan-Chr8:70858074 0.00E+00 transposed
Tan11g0565 Tan-Chr11:4993471 Tan08g1860 Tan-Chr8:70858074 6.60E-293 transposed
Tan05g0215 Tan-Chr5:1675533 Tan08g1860 Tan-Chr8:70858074 4.00E-08 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1860 K05658 - csv:101220974 2427.51