Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g1860 | ATGTCACAAGATTCTGAGGAGATAAAGACGATTGAGCAGTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTCGTCTCTTCTGATCCTCCTCCTACTTCTCTTGACCCGTTTATAACCAGCAACCCATCAGCCCCAACAGCGAAACTCAAAGACCTTGAAGGCCTCAGCCCCAAAGTGGAGGCTCAAGACGGAATTGACAGAGCCACAAACGGAGAAATGGAGTCTACAAGTGATTCCAAGAAGGAAAACGGCGGTGGCACCAGTGGGGAGAAGCCTGAGGCTGTCGCCGCCGTTGGGTTTGGGGAGCTTTTCAGATTCGCCGATGGGTTGGATTACGTTTTGATGGCAATTGGGTCGGTTGGAGCCCTCGTTCATGGTTGTTCTCTGCCTCTGTTTCTTCGATTCTTTGCCGATCTTGTTAACTCTTTTGGGTCTTACGCCAATGATGTGGATAAAATGATGCAGGAGGTTTTGAAGTACGCATTCTACTTTCTCGTGGTTGGAGCTGCTATATGGGCGTCATCCTGGGCAGAGATTTCGTGTTGGATGTGGACCGGCGAGCGGCAGTCCACAAAGATGAGGATCAAGTACCTAGAAGCAGCACTGGACCAGGACATTCAGTATTTTGATACAGAGGTGCGAACATCTGATGTCGTTTTCGCCATCAACACTGATGCAGTGATGGTCCAAGACGCCATTAGTGAGAAGCTGGGCAACTTCATCCACTATATGGCAACATTTGTTTCCGGATTCGTTGTGGGTTTCACAGCTGTGTGGCAATTGGCTTTGGTAACTCTTGCGGTGGTTCCTCTGATTGCCGTAATCGGCGGCATCTACACCACCACGATAGCCAAGCTCACTGCCAAGACCCAGGAAGCTCTTTCAGAAGCTGGGAATATCGTCGAACAGACAATAGTTCAAATTCGAGTTGTTTTTGCTTTCGTCGGCGAATCAAGAGCATTACAGAGGTACTCCTCTGCATTGAAGATTTCTCAAAGGATAGGTTACAAGAGTGGATTCTCCAAGGGTATGGGATTGGGCGCCACTTACTTTGTTGTTTTCTGCTGTTACGCTCTTCTGCTCTGGTACGGAGGTTATCTTGTTAGACACCACGCCACCAATGGCGGTCTCGCCATAGCCACCATGTTTGCAGTGATGATTGGCGGACTGGCATTGGGGCAATCTGCTCCGAGCATGAGTTCATTCGCAAAGGCTAAAGTTGCAGCTGCCAAAATCTACCGCATAATCGACCATAAGCCCACTCTAAACCGCAACAACGAATCTGGCTTGGAATTAGAGTCGGTTTCGGGACTGGTTGAGCTAAAGAATGTAGATTTCTCATACCCATCAAGGCCAGATGTAAAAATCCTCAACAACTTCTCCCTAACAGTCCCTGCCGGAAAAACTATAGCTCTGGTCGGTAGCAGTGGCTCCGGCAAGAGCACCGTCGTCTCCCTAATTGAAAGATTCTATGATCCCATTTCAGGTGAAGTTCTACTAGATGGCCGTGACATAAAAACTTTGAAGCTAAAATGGTTAAGGCAGCAGATAGGGCTGGTGAGCCAAGAACCTGCTCTTTTTGCCACCACCATCAAGGAGAATATTCTCTTGGGCAGACCTGATGCAGACCAAGTTGAGGTGGAGGAAGCTGCTCGAGTCGCCAATGCTCATTCATTCATTATCAAACTTCCTGAAGGCTATGACACCCAGGTAGGAGAAAGAGGACTGCAGCTGTCTGGGGGGCAGAAGCAGAGGATTGCAATAGCAAGGGCAATGCTGAAAAACCCTGCGATCTTACTCTTAGATGAGGCAACCAGTGCATTGGACTCTGAGTCAGAAAAGCTTGTACAGGAGGCCCTGGATCGTTTCATGATCGGGCGGACCACTCTTGTTATTGCCCATCGTCTCTCTACCATTCGCAAGGCTGACCTTGTGGCTGTACTCCAACAAGGAAGTGTTTCTGAAATAGGAACACATGACGAGCTCATTGCTAAAGGAGAGAATGGTGTATATGCCAAGCTCATCCGAATGCAGGAGATGGCACATGAAACTGCTCTCAATAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCCAGGAACTCAGTGAGCTCCCCAATAATTGCACGGAATTCTTCCTATGGACGATCGCCATATTCACGTCGGTTATCTGACTTCTCCACATCTGATTTTAGTCTTTCTCTGGATGCTTCACTTCCCAATTACAGGCTTGAAAAACTTCCCTTTAAGGAGCAGGCCAGTTCCTTTTGGCGTCTAGTGAAAATGAATTCACCCGAATGGCTCTATGCATTACTTGGTTCTATTGGTTCTGTTGTTTGTGGGTTTTTAAGTGCCTTCTTCGCATACGTTCTAAGTGCTGTTCTCAGTGTCTATTACAACCCAGACCATGCTTTCATGAGCAGAGAAATTATTAAGTACTGCTACTTATTGATCGGACTTTCATCAGCTGCTCTCCTCTTCAATACAATACAGCATTTCTTCTGGGATATTGTGGGAGAGAACCTCACGAAACGTGTAAGAGAGAAGATGCTGACAGCAGTACTTAAAAATGAAATGGCATGGTTTGACCAGGAAGAAAATGAGAGTGCCAAGATTGCTGCAAGGCTGGCCCTCGACGCTAACAATGTCAGATCAGCCATTGGAGACAGGATCTCTGTGATTGTACAGAACACATCACTCATGCTAGTTGCATGCACTGCTGGATTCGTTTTGCAGTGGCGCCTCTCTCTTGTCCTTGTAGCCGTCTTCCCTGTGGTTGTTGCGGCCACCGTTCTACAGAAAATGTTCATGACTGGTTTTTCAGGAGACCTTGAGGCCAACCATGCCAAGGCCACACAACTAGCAGGGGAGGCCATAGCCAATGTGAGGACTGTTGCTGCGTTCAACTCAGAGGAAAAGATTGTCAGACTTTTCTCAACCAACCTCGAGATCCCACTACGACGCTGCTTTTGGAAGGGGCAGATTGCGGGTAGTGGATTCGGTGTTGCTCAGTTCTCTCTTTATGCTTCCTATGCCCTAGGTCTCTGGTATGCCTCATGGCTTGTGAAGCATGGGCTCTCTGATTTTTCAAAGGCAATCCGTGTTTTCATGGTCCTTATGGTTTCTGCAAATGGCGCAGCTGAAACACTCACTCTTGCCCCTGATTTTATTAAGGGTGGGCGAGCTATGCGTTCAGTCTTTGCCCTTCTTGACCGCAAAACTGAAATTGAACCTGATGATCCAGATGCCACCCCAGTCCCAGATAAACTTCGTGGAGAAGTTGAATTTAAACATGTTGACTTTTCCTACCCAACTCGTCCTGATATCCCTGTCTTCAGAGACCTTAGTTTGCGTGCCCGAGCAGGTAAGACTCTTGCTCTTGTTGGCCCTAGCGGGTGTGGCAAGAGCTCTGTTATTGCACTAGTCCAAAGATTCTATGAGCCATCATCAGGACGAGTTATGATAGATGGAAAGGATATTCGTAAGTTCAATCTCAAGTCCCTGAGAAAGCACATTGCAATGGTCCCTCAGGAGCCATGCTTATTTGCTGCTTCCATATATGATAATATAGCTTATGGCCATGAATCAGCTACTGAGGCCGAGATCGTTGAAGCTGCTACTTTGGCGAATGCTCATAAGTTCGTATCTGCATTGCCAGAAGGATATAAAACTTTTGTTGGGGAGAGGGGAGTTCAACTATCAGGTGGACAGAAACAAAGAATTGCAATTGCCCGTGCTCTGATCAGGAAGACAGAGCTTATGCTACTAGATGAGGCAACAAGTGCACTCGATGCTGAGTCTGAGCGATCCGTCCAGGAGGCTCTTGACCGAGCTTGTTCAGGAAAAACAACAATCGTAGTTGCTCATCGACTATCAACGATCAGGAATGCTCACGTCATTGCAGTGATTGATGACGGTAAAGTTGCAGAGCAGGGATCACACTCACATTTGTTGAAAAATTATCCTGATGGGTGTTACGCCCGGATGATACAATTACAAAGATTCACACACAGCCAAGTCATTGGTATGACTTCAGGTTCAACTTCCTCAGCAAGAACTAGAGAGGATGAGGATAGAGAGAGCTAG | 4086 | 47.33 | MSQDSEEIKTIEQWKWSEMQGLELVSSDPPPTSLDPFITSNPSAPTAKLKDLEGLSPKVEAQDGIDRATNGEMESTSDSKKENGGGTSGEKPEAVAAVGFGELFRFADGLDYVLMAIGSVGALVHGCSLPLFLRFFADLVNSFGSYANDVDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALDQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGGIYTTTIAKLTAKTQEALSEAGNIVEQTIVQIRVVFAFVGESRALQRYSSALKISQRIGYKSGFSKGMGLGATYFVVFCCYALLLWYGGYLVRHHATNGGLAIATMFAVMIGGLALGQSAPSMSSFAKAKVAAAKIYRIIDHKPTLNRNNESGLELESVSGLVELKNVDFSYPSRPDVKILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPISGEVLLDGRDIKTLKLKWLRQQIGLVSQEPALFATTIKENILLGRPDADQVEVEEAARVANAHSFIIKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASLPNYRLEKLPFKEQASSFWRLVKMNSPEWLYALLGSIGSVVCGFLSAFFAYVLSAVLSVYYNPDHAFMSREIIKYCYLLIGLSSAALLFNTIQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESAKIAARLALDANNVRSAIGDRISVIVQNTSLMLVACTAGFVLQWRLSLVLVAVFPVVVAATVLQKMFMTGFSGDLEANHAKATQLAGEAIANVRTVAAFNSEEKIVRLFSTNLEIPLRRCFWKGQIAGSGFGVAQFSLYASYALGLWYASWLVKHGLSDFSKAIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFALLDRKTEIEPDDPDATPVPDKLRGEVEFKHVDFSYPTRPDIPVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKFNLKSLRKHIAMVPQEPCLFAASIYDNIAYGHESATEAEIVEAATLANAHKFVSALPEGYKTFVGERGVQLSGGQKQRIAIARALIRKTELMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEDRES | 1361 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 70858074 | 70865176 | + | Tan0003514.1 | Tan08g1860 | 761752 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g1860 | 1361 | CDD | ABC_MTABC3_MDL1_MDL2 | 1094 | 1333 | - | - | |
| Tan08g1860 | 1361 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1094 | 1330 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Tan08g1860 | 1361 | Gene3D | ABC transporter type 1, transmembrane domain | 102 | 691 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Tan08g1860 | 1361 | PANTHER | ABC TRANSPORTER B FAMILY | 74 | 703 | IPR039421 | GO:0005887(PANTHER)|GO:0042626(PANTHER) | |
| Tan08g1860 | 1361 | FunFam | ABC transporter B family member 19 | 1060 | 1082 | - | - | |
| Tan08g1860 | 1361 | SUPERFAMILY | ABC transporter transmembrane region | 103 | 417 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Tan08g1860 | 1361 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 439 | 675 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Tan08g1860 | 1361 | MobiDBLite | consensus disorder prediction | 21 | 91 | - | - | |
| Tan08g1860 | 1361 | MobiDBLite | consensus disorder prediction | 1341 | 1361 | - | - | |
| Tan08g1860 | 1361 | FunFam | ABC transporter B family member 1 | 1084 | 1334 | - | - | |
| Tan08g1860 | 1361 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 761 | 1076 | - | - | |
| Tan08g1860 | 1361 | ProSitePatterns | ABC transporters family signature. | 578 | 592 | IPR017871 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Tan08g1860 | 1361 | MobiDBLite | consensus disorder prediction | 73 | 87 | - | - | |
| Tan08g1860 | 1361 | FunFam | ABC transporter B family member 1 | 429 | 679 | - | - | |
| Tan08g1860 | 1361 | CDD | ABC_MTABC3_MDL1_MDL2 | 439 | 678 | - | - | |
| Tan08g1860 | 1361 | Gene3D | - | 429 | 679 | IPR027417 | - | |
| Tan08g1860 | 1361 | Gene3D | - | 1083 | 1334 | IPR027417 | - | |
| Tan08g1860 | 1361 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 771 | 1058 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Tan08g1860 | 1361 | Pfam | ABC transporter | 1113 | 1261 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Tan08g1860 | 1361 | ProSitePatterns | ABC transporters family signature. | 1233 | 1247 | IPR017871 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Tan08g1860 | 1361 | Gene3D | ABC transporter type 1, transmembrane domain | 1060 | 1337 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Tan08g1860 | 1361 | SMART | AAA_5 | 466 | 652 | IPR003593 | GO:0016887(InterPro) | |
| Tan08g1860 | 1361 | SMART | AAA_5 | 1121 | 1313 | IPR003593 | GO:0016887(InterPro) | |
| Tan08g1860 | 1361 | Pfam | ABC transporter transmembrane region | 773 | 1041 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Tan08g1860 | 1361 | Pfam | ABC transporter transmembrane region | 117 | 388 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Tan08g1860 | 1361 | Gene3D | ABC transporter type 1, transmembrane domain | 751 | 1059 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Tan08g1860 | 1361 | SUPERFAMILY | ABC transporter transmembrane region | 758 | 1080 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Tan08g1860 | 1361 | Pfam | ABC transporter | 457 | 606 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Tan08g1860 | 1361 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 115 | 402 | - | - | |
| Tan08g1860 | 1361 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 116 | 404 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Tan08g1860 | 1361 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1085 | 1333 | IPR027417 | - | |
| Tan08g1860 | 1361 | MobiDBLite | consensus disorder prediction | 32 | 46 | - | - | |
| Tan08g1860 | 1361 | FunFam | ABC transporter B family member 1 | 750 | 1059 | - | - | |
| Tan08g1860 | 1361 | FunFam | ABC transporter B family member 1 | 102 | 437 | - | - | |
| Tan08g1860 | 1361 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 430 | 678 | IPR027417 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan08g1860 | Tan-Chr8:70858074 | Tan11g0771 | Tan-Chr11:6490221 | 2.80E-276 | dispersed | |
| Tan01g4511 | Tan-Chr1:110767615 | Tan08g1860 | Tan-Chr8:70858074 | 8.70E-277 | transposed | |
| Tan01g5038 | Tan-Chr1:115959953 | Tan08g1860 | Tan-Chr8:70858074 | 1.10E-284 | transposed | |
| Tan03g2636 | Tan-Chr3:79542524 | Tan08g1860 | Tan-Chr8:70858074 | 7.40E-292 | transposed | |
| Tan04g0133 | Tan-Chr4:865122 | Tan08g1860 | Tan-Chr8:70858074 | 1.30E-249 | transposed | |
| Tan05g0565 | Tan-Chr5:4005822 | Tan08g1860 | Tan-Chr8:70858074 | 2.90E-12 | transposed | |
| Tan05g1552 | Tan-Chr5:33886509 | Tan08g1860 | Tan-Chr8:70858074 | 4.90E-256 | transposed | |
| Tan05g2344 | Tan-Chr5:74888178 | Tan08g1860 | Tan-Chr8:70858074 | 3.10E-89 | transposed | |
| Tan07g0256 | Tan-Chr7:5530315 | Tan08g1860 | Tan-Chr8:70858074 | 6.50E-72 | transposed | |
| Tan08g1711 | Tan-Chr8:68859594 | Tan08g1860 | Tan-Chr8:70858074 | 1.10E-57 | transposed | |
| Tan09g1216 | Tan-Chr9:64505621 | Tan08g1860 | Tan-Chr8:70858074 | 4.00E-274 | transposed | |
| Tan11g0522 | Tan-Chr11:4464064 | Tan08g1860 | Tan-Chr8:70858074 | 0.00E+00 | transposed | |
| Tan11g0565 | Tan-Chr11:4993471 | Tan08g1860 | Tan-Chr8:70858074 | 6.60E-293 | transposed | |
| Tan05g0215 | Tan-Chr5:1675533 | Tan08g1860 | Tan-Chr8:70858074 | 4.00E-08 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g1860 | K05658 | - | csv:101220974 | 2427.51 |