Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g1884 | ATGGCGAACGAAGACATCGAAGTCGGAGCTCCGGAGTCGGCGTCGAGGAAGGATTATTTGGACCCGGTGCCGGCGCCGATAATCGACAGGGAGGAGTTGGCAAAATGGTCGTTTTACAGAGCGATAATTGCGGAGTTTGTGGCGACTCTGTTGTTTCTGTACGTCACCGTTTTGACGGTGATCGGAAATAAAAGCCAGACGGATCCGCTCATTAGCGGGAATGTGTGCGCCGGAGTTGGCACCCTCGGAGTCGCGTGGGCCTTCGGCGGTATGATCTTCGTCCTCGTTTACTGCACCGCCGGTATCTCTGGAGGACACATAAATCCGGCAGTGTCATTTGGAATGTTTTTGGGGAGAAAGATATCGCTTGTTCGCGCCTTGCTTTACATTATAGCTCAGTGCTTAGGGGCACTCTGTGGCTGCGCCTTAGTGAAGACACTGCAAAGAGATCGCTACAACCATTACGGCGGCGGCGCGAACCAGCTCGTTGATGGCTACAGCCAAGGCACCGGTCTCGCTGTCGAGATCGTTGGCACCTTCGTCCTTCTCTACACCGTCTTCTCCGCCACCGATCCCAAACGCAATGCTCGAGATTCCTACGTTCCCGTTCTCGCTCCGCTCCCTATCGGCTTTGCTGTCTTCATGGTTCACCTCGCTACAATCCCGGTTACTGGCACTGGCATCAACCCGGCTCGAAGCTTCGGCGCCGCGGTCATCATCAACGATAAAAAAGTTTGGAAAGATCATTGGATTTTTTGGGTAGGGCCGTTAATTGGATCAACCATTGCTACAATGTATTACCAACATGTTCTTCGAGCCTCCGCTGTGAGAGCCATCAGATCTTTCAGAAGCTCACCACCCACTCGCGACTAA | 873 | 53.38 | MANEDIEVGAPESASRKDYLDPVPAPIIDREELAKWSFYRAIIAEFVATLLFLYVTVLTVIGNKSQTDPLISGNVCAGVGTLGVAWAFGGMIFVLVYCTAGISGGHINPAVSFGMFLGRKISLVRALLYIIAQCLGALCGCALVKTLQRDRYNHYGGGANQLVDGYSQGTGLAVEIVGTFVLLYTVFSATDPKRNARDSYVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIINDKKVWKDHWIFWVGPLIGSTIATMYYQHVLRASAVRAIRSFRSSPPTRD | 290 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 71178168 | 71183210 | + | Tan0014338.1 | Tan08g1884 | 761776 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g1884 | 290 | CDD | MIP | 40 | 270 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan08g1884 | 290 | ProSitePatterns | MIP family signature. | 106 | 114 | IPR022357 | - | |
Tan08g1884 | 290 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 4 | 283 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Tan08g1884 | 290 | NCBIfam | MIP family channel protein | 44 | 267 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan08g1884 | 290 | Gene3D | Glycerol uptake facilitator protein. | 25 | 288 | IPR023271 | - | |
Tan08g1884 | 290 | SUPERFAMILY | Aquaporin-like | 31 | 272 | IPR023271 | - | |
Tan08g1884 | 290 | Pfam | Major intrinsic protein | 32 | 267 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan08g1884 | 290 | PRINTS | Major intrinsic protein family signature | 210 | 232 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan08g1884 | 290 | PRINTS | Major intrinsic protein family signature | 88 | 112 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan08g1884 | 290 | PRINTS | Major intrinsic protein family signature | 174 | 192 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan08g1884 | 290 | PRINTS | Major intrinsic protein family signature | 40 | 59 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan08g1884 | 290 | PRINTS | Major intrinsic protein family signature | 125 | 144 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan08g1884 | 290 | PRINTS | Major intrinsic protein family signature | 250 | 270 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan08g1884 | 290 | FunFam | Probable aquaporin PIP1-2 | 25 | 286 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g1534 | Tan-Chr8:63537060 | Tan08g1884 | Tan-Chr8:71178168 | 2.40E-28 | dispersed | |
Tan08g1884 | Tan-Chr8:71178168 | Tan11g0853 | Tan-Chr11:7002074 | 4.70E-117 | dispersed | |
Tan03g1055 | Tan-Chr3:66822569 | Tan08g1884 | Tan-Chr8:71178168 | 2.40E-110 | wgd | |
Tan04g0596 | Tan-Chr4:5061882 | Tan08g1884 | Tan-Chr8:71178168 | 4.20E-118 | wgd | |
Tan05g0256 | Tan-Chr5:1952043 | Tan08g1884 | Tan-Chr8:71178168 | 2.30E-116 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g1884 | K09872 | - | csv:101214142 | 505.753 |