Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1896 ATGTTGAATTTCTCTCCATTTTCCTCATCATTTGCATTTACCTTCGGATTACTTCTATTTTCCTTTTCTAGTGCTGGCATTTTCAATTCCGCCGCCATCGTCGCCGCCGCCACTGAGTTCGACTTCGGCACCGTCGCCCTCAGTAGCTTGAAGCTTCTCGGCGATGCCCACTTAAACAACAACAGCGTGAGGCTCACGCGAGACCTCGCTGTCCCCAACTCCGGCGCTGGCAGAGTCCTCTACGCCAGACCCATCAGATTCCGGCAGCCGGGGTTTAACTACCTCGCAAGTTTCTCCACATTTTTCTCCTTCTCCGTCTCTAATCTCAACCCGTCCTCGATCGGCGGCGGTTTGGCGTTTGTAATCTCGCCGGACGCTGACACGCTCGGCGGCGCCGGCGGATTCATGGGGCTGGCCGACGAGAGGGGATTGGGATTCGTGGCGGTGGAATTCGACACGTTGATGGATGTTGAATTTAAGGACATTAATGGGAACCATGTGGGATTGGATCTAAACGACATGGTTTCGTTACAGGTTAAAGATCTGGACGGAATTGGAATCGATCTCAAAAGCGGCGATACGGTAAATTCTTGGATCGAATACGACGGGTCGTCTCGGATCTTCAAAATTTTCGTTTCGTATTCGAATTTGAAACCGACAGAACCTTTATTGTCGTTCAATCTCGATCTCGACCCGTATTTGAACGATTTTATGTACGTCGGATTCTCCGGTTCGACACAGGGGAGCACGGAAGTTCACAGCGTGGATTGGTGGAGCTTTACGTCGTCGTTTGACTCAAATTCCCCGCCCGGAGCGGTTCCGCCTCCGCCGTCGACGACGCTGATGAACCCAGCGGCGAATATTGTCCGTTCACCGCCGCCGACGCAACCGCCGTCGGGGTCAAATTCCGTCACGCAAAAAGACACCAAGTCGCCGTCCTGCCACAATGGACTCTGCAAGCAAGGCGCTGGCGCGGTGGTCGGAGTAGTGACGGCGGGGGCGTTTGTTCTAGCATTATTTGCCGGGGGGTTAATTTGGGTATATTCCAAAAAGATCAAACGGGTCAAAAAATCAGACTCCCTCGCTTCGGAAATCATCAAAATGCCCAAGGAGTTCACTTATAAGGAGCTTAAAATCGCCACCAAATGCTTCAATTCGAACAGAATCATCGGCCATGGCGCTTTTGGGACTGTTTATAAAGGGATTGTGCCGGAGACCGGCGACATTGTGGCGGTGAAACGGTGCAGCCATAGTACACAAGGGAAGAACGAATTTCTCTCTGAACTTTCAATCATCGGAACTCTCCGGCACCGGAATTTGGTCCGTCTTCAAGGATGGTGTCACGAGAAGGGCGAAATTTTACTCGTTTACGATTTAATGCCAAATGGGAGTTTGGATAAAGCACTTTTCGAGGCCAGAACGCCGCTGCCGTGGCCTCACCGGAGAAAAATCCTCCTCGGCGTCGCCTCGGCGTTGGCCTATTTGCATCAAGAATGTGAAAATCAAGTCATTCACAGAGACGTTAAAACCAGTAACATAATGTTGGATGAAGGATTCAATGCCCGATTAGGCGATTTCGGGTTGGCCCGACAAGTGGAGCACGACAAATCGCCGGACGCCACCGTCGCCGCTGGCACAATGGGGTATTTAGCGCCGGAATATCTCCTCACCGGACGGGCGACGGAAAAAACCGACGTGTTCAGCTTCGGCGCCGTCGTTCTCGAAGTCGCAAGCGGCAGACGACCGATCGAGAAAGACACGGCTTCCACCGCCACGGGTGGCGGCGGCAAATTCGGCGTCAACAGTAATTTGGTCGACTGGGTTTGGAGTTTACACCGGGAAGGACGGTTGTTGACGGCAGCCGACGGGAGACTGGGCGGCGAGTTTGAGGAATCGGAGATGAGGAAAGTTTTGTTAGTCGGGTTGGCTTGTTCGCACCCGGATCCGATGACACGACCCACGATGAGAGGCGTAGTGCAAATGTTAATCGGCGATTCGGAGATTCCGATCGTCCCTCGGTCTAAGCCGTCGACGAGCTTCAGCACCGCTCATTTGCTTCTCACTCTACAAGACAGCGTGTCCGATCTCAACGGCATGATCGCCATTTCCACTTCCTCGTCCGAGCACAGCTTCAAGGGCGAGGATTTGATCTCGCTGGATGATCGGACGGTGAGAAGTCCATCAAACGTTTGA 2193 52.9 MLNFSPFSSSFAFTFGLLLFSFSSAGIFNSAAIVAAATEFDFGTVALSSLKLLGDAHLNNNSVRLTRDLAVPNSGAGRVLYARPIRFRQPGFNYLASFSTFFSFSVSNLNPSSIGGGLAFVISPDADTLGGAGGFMGLADERGLGFVAVEFDTLMDVEFKDINGNHVGLDLNDMVSLQVKDLDGIGIDLKSGDTVNSWIEYDGSSRIFKIFVSYSNLKPTEPLLSFNLDLDPYLNDFMYVGFSGSTQGSTEVHSVDWWSFTSSFDSNSPPGAVPPPPSTTLMNPAANIVRSPPPTQPPSGSNSVTQKDTKSPSCHNGLCKQGAGAVVGVVTAGAFVLALFAGGLIWVYSKKIKRVKKSDSLASEIIKMPKEFTYKELKIATKCFNSNRIIGHGAFGTVYKGIVPETGDIVAVKRCSHSTQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSFGAVVLEVASGRRPIEKDTASTATGGGGKFGVNSNLVDWVWSLHREGRLLTAADGRLGGEFEESEMRKVLLVGLACSHPDPMTRPTMRGVVQMLIGDSEIPIVPRSKPSTSFSTAHLLLTLQDSVSDLNGMIAISTSSSEHSFKGEDLISLDDRTVRSPSNV 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 71305982 71308595 + Tan0022375.1 Tan08g1896 761788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1896 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1896 730 FunFam L-type lectin-domain containing receptor kinase VIII.1 36 273 - -
Tan08g1896 730 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 268 IPR013320 -
Tan08g1896 730 ProSiteProfiles Protein kinase domain profile. 384 671 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1896 730 CDD lectin_legume_LecRK_Arcelin_ConA 38 264 IPR001220 GO:0030246(InterPro)
Tan08g1896 730 SMART serkin_6 384 662 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1896 730 MobiDBLite consensus disorder prediction 266 313 - -
Tan08g1896 730 Gene3D - 36 271 - -
Tan08g1896 730 Pfam Legume lectin domain 39 266 IPR001220 GO:0030246(InterPro)
Tan08g1896 730 PANTHER - 42 678 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)
Tan08g1896 730 CDD STKc_IRAK 390 662 - -
Tan08g1896 730 FunFam L-type lectin-domain containing receptor kinase VIII.1 348 459 - -
Tan08g1896 730 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
Tan08g1896 730 Gene3D Phosphorylase Kinase; domain 1 346 459 - -
Tan08g1896 730 SUPERFAMILY Protein kinase-like (PK-like) 366 691 IPR011009 -
Tan08g1896 730 Pfam Protein kinase domain 385 659 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1896 730 FunFam L-type lectin-domain containing receptor kinase VIII.1 460 680 - -
Tan08g1896 730 ProSitePatterns Protein kinases ATP-binding region signature. 390 413 IPR017441 GO:0005524(InterPro)
Tan08g1896 730 Gene3D Transferase(Phosphotransferase) domain 1 460 683 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1843 Tan-Chr1:19686140 Tan08g1896 Tan-Chr8:71305982 1.50E-171 dispersed
Tan08g1896 Tan-Chr8:71305982 Tan11g1173 Tan-Chr11:9679919 1.80E-117 dispersed
Tan08g1896 Tan-Chr8:71305982 Tan08g2021 Tan-Chr8:72294741 3.80E-99 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67963 PF00069 Pkinase 2.60E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1896 - - - 0.0