Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1927 ATGGAGACTAAGCTTCTGCTTCTGTTTCTTCTCCTTTTTCTGGATGTCTCCTTTGCTCAGATGCCAGGTTTTGTAAGTTTGGACTGTGGAGGTCAAGAAAGTTTCACTGATGATATTGGTCTGGAGTGGGTTCCAGATACCCAAGTTCGTTTTGGCGAAGCAATTAACATTTCTGTTGCAAATGAGACAAGGAAGCAATACAGGACCTTAAGACACTTCCCTGCTGATTCCAGGAAGTACTGTTACTCTCTCAATGTCACTAGTAGAACACGTTACCTTCTCAGAGCAACATTTTTGTATGGTAACTTCGACAACAACAACGTGTATCCAAAATTTGACATTTCCCTTGGGGCAACTCACTGGGCAACAATTGTCATATCTGACGCCAGCACTATAGAGGTTCGAGAGCTCATATTTCTGGCTTCAACTTCTACCGTGAGTGTTTGTTTGTCAAATGCTACAACTGGGCAGCCATTCATATCCACGCTTGAGCTTCGACAATTTAATGGCTCTACCTACTATACTGAATTTGAGGATCAATTTTACCTAAGTGTCTCAGCAAGGATAAACTTTGGAGCAGATTCTGAAGCTCCAGTAAGGTATCCTGATGATCCATTTGATCGGATATGGGAGTCTGATTCTGTGAGAAAAGCAAATTACCTTGTTGATGTTGCTGCTGGTACTGAAAAAGTTTCCACTAAAATGCCAATAGATGTAGATAGAGATGAAAGACCACCCCAAAAAGTTATGCAGACTGCTGTAGTTGGCCGAAATGGTTCATTAACTTACCGGTTGAATTTGGATGGTTTTCCTGCATTTGGATGGGCAGTCACCTACTTTGCAGAAATTGAAGACTTGGGCCCAACTGATACGAGAAAATTCAGGCTCGTACTTCCCGGCATGCCTGAAATCAGCAAAGCTGTAGTCAACATTGAAGAAAATGCTCAAGGACAATATCGGCTTTATGAGCCTGGTTTTACCAACATAACCTTCCCTTTTGTATTATCTTTTAAGTTTGGGAAAACATCAGATTCTGTGTTGGGACCTCTGTTAAATGCTATGGAGATTAACAAGTATCTCGAAAAAAGTGATGGTTCTCTAGATGAAGCAGTTGTTGCTAGTGTGATTTCAAAATTCTCATCTTCAGATTGGGATGAAGGTGGTGATCCATGCATGCCAGTTCCTTGGTCATGGTTGCAATGCAACTCTGATCCACAGCCAAGAATAGTTAAGATTTCATTGTCCAAAAAGAATTTGACGGGGAACATCCCTACAGACCTTGCAAAGTTGAGCGGTTTAGTTGAATTGTGGCTTGATGGAAATTCATTTGTTGGTCCTATACCCGATTTTACTGGCTGCGTGGACTTGAAAATCCTCCATCTTGAGAACAACCAGTTGACCGGAGAGTTGCCTTCCTCTTTAGTAAACCTTCCAAGTTTACGAGAGCTGTATGTACAGAATAACATGTTATCTGGAACAGTGCCTTCCGGACTTCTCAATAAAAACCTAGTTTTAGTCTACTCTGGAAACATTAATCTTCATGAAGGGGGGAAAAAGAACCACGTTTATATCATTGTGGGTTCTGTAATTGGTGCTCTTGTCCTGCTTTTGGCTACTGTGGTATCTTGCTACTTTTTGCAAAGAGGAAGAAAAAAGTATCGTGAACAAGATCTGCTTGAAGAATCCATGCCTGTCCAAAGATTTGCCTCTTCAAAGGGTGATGCCCCCAAGGAAACCGCGCATTGCTTCAGTGTTAATGAAATTGAAGAAGCAACGAGAGGTTTTGAAAGAAAAATTGGGTCTGGAGGTTTTGGTGTTGTATACTACGGGAAATTAAATGATGGAAAAGAAATCGCAGTTAAAGTCTTGACTAGTAATTCCTTCCAGGGAAAGCGAGAATTTACAAATGAGGTGACTCTTCTCTCAAGGATTCATCACAGAAATCTTGTACAATTTCTTGGATATTGTCAAGAAGTAGAAAAAAGTATGCTTGTCTATGAGTTCATGCACAATGGAACACTCAAGGAACATCTTTATGGTCCATTAACACGTGGAAAAACTATCAGTTGGGTAAAGCGCCTCGAGATTGCTGAAGATGCTGCTAGAGGGATTGAATACCTTCACACAGGGTGTATACCAGCAATTATTCATAGGGACTTGAAAAGCAGTAATATTCTTCTTGACAGGCACATGAGAGCAAAGGTTTCAGATTTTGGTCTTTCAAAGCTTGCGGTGGATGGCGTCTCCCATGTGTCCAGCATAGTCCGGGGAACTGTTGGATATTTGGATCCAGAGTATTATATCTCTCAGCAGTTGACAGACAAGAGTGATGTATATAGCTTTGGCGTTATTCTTCTCGAGTTGATATCGGGTCAAGAAGCTATATCTAACGTAAACTTTGGTGTTAATTGCCGCAACATCGTCCAGTGGGCAAAATTACACATCGAGAGCGGGGACATTCAAGGGATCATTGATCCATCGTTACGCAACGAGTATGACATTCAATCGATGTGGAAAATCGCAGAGAAAGCATTGATGTGTGTCCAACCACATGGGCACCTGAGGCCATCCATATCTGAAGTGCTCAAGGAGATACAGGATTCAATCTTGATTGAAAGGGAACATCTTGGTAGAGAAGGTAACTCTGATGAAATTTCTAGAAATTCAGTCCATTCTATGAATATGGGATCTCTTGATTTGTGTGGAAACGAAAACTACGTGTCGTTTGACGAATCCATCGCTCGACCTACTGCAAGGTAG 2760 41.45 METKLLLLFLLLFLDVSFAQMPGFVSLDCGGQESFTDDIGLEWVPDTQVRFGEAINISVANETRKQYRTLRHFPADSRKYCYSLNVTSRTRYLLRATFLYGNFDNNNVYPKFDISLGATHWATIVISDASTIEVRELIFLASTSTVSVCLSNATTGQPFISTLELRQFNGSTYYTEFEDQFYLSVSARINFGADSEAPVRYPDDPFDRIWESDSVRKANYLVDVAAGTEKVSTKMPIDVDRDERPPQKVMQTAVVGRNGSLTYRLNLDGFPAFGWAVTYFAEIEDLGPTDTRKFRLVLPGMPEISKAVVNIEENAQGQYRLYEPGFTNITFPFVLSFKFGKTSDSVLGPLLNAMEINKYLEKSDGSLDEAVVASVISKFSSSDWDEGGDPCMPVPWSWLQCNSDPQPRIVKISLSKKNLTGNIPTDLAKLSGLVELWLDGNSFVGPIPDFTGCVDLKILHLENNQLTGELPSSLVNLPSLRELYVQNNMLSGTVPSGLLNKNLVLVYSGNINLHEGGKKNHVYIIVGSVIGALVLLLATVVSCYFLQRGRKKYREQDLLEESMPVQRFASSKGDAPKETAHCFSVNEIEEATRGFERKIGSGGFGVVYYGKLNDGKEIAVKVLTSNSFQGKREFTNEVTLLSRIHHRNLVQFLGYCQEVEKSMLVYEFMHNGTLKEHLYGPLTRGKTISWVKRLEIAEDAARGIEYLHTGCIPAIIHRDLKSSNILLDRHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNVNFGVNCRNIVQWAKLHIESGDIQGIIDPSLRNEYDIQSMWKIAEKALMCVQPHGHLRPSISEVLKEIQDSILIEREHLGREGNSDEISRNSVHSMNMGSLDLCGNENYVSFDESIARPTAR 919
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 71517396 71524469 - Tan0017392.1 Tan08g1927 761819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1927 919 SMART serkin_6 593 870 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1927 919 SUPERFAMILY Protein kinase-like (PK-like) 579 863 IPR011009 -
Tan08g1927 919 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 669 877 - -
Tan08g1927 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1927 919 Pfam Protein tyrosine and serine/threonine kinase 595 798 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1927 919 FunFam Leucine-rich repeat receptor-like protein kinase 570 668 - -
Tan08g1927 919 SUPERFAMILY L domain-like 393 513 - -
Tan08g1927 919 Pfam Malectin-like domain 27 357 IPR024788 -
Tan08g1927 919 ProSitePatterns Protein kinases ATP-binding region signature. 599 621 IPR017441 GO:0005524(InterPro)
Tan08g1927 919 PANTHER OS07G0107800 PROTEIN-RELATED 453 873 - -
Tan08g1927 919 ProSiteProfiles Protein kinase domain profile. 593 870 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1927 919 CDD STKc_IRAK 599 866 - -
Tan08g1927 919 Gene3D Ribonuclease Inhibitor 370 520 IPR032675 -
Tan08g1927 919 Gene3D Transferase(Phosphotransferase) domain 1 669 883 - -
Tan08g1927 919 Pfam Leucine Rich Repeat 479 498 IPR001611 GO:0005515(InterPro)
Tan08g1927 919 Pfam Leucine Rich Repeat 456 477 IPR001611 GO:0005515(InterPro)
Tan08g1927 919 FunFam Leucine-rich repeat protein kinase family protein 369 519 - -
Tan08g1927 919 Gene3D Phosphorylase Kinase; domain 1 568 668 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0109 Tan-Chr4:744925 Tan08g1927 Tan-Chr8:71517396 2.70E-182 dispersed
Tan04g0110 Tan-Chr4:744925 Tan08g1927 Tan-Chr8:71517396 2.70E-182 dispersed
Tan06g1296 Tan-Chr6:14960253 Tan08g1927 Tan-Chr8:71517396 4.30E-100 dispersed
Tan06g1418 Tan-Chr6:18473021 Tan08g1927 Tan-Chr8:71517396 4.50E-105 dispersed
Tan07g1094 Tan-Chr7:32334378 Tan08g1927 Tan-Chr8:71517396 6.70E-82 dispersed
Tan07g1095 Tan-Chr7:32334378 Tan08g1927 Tan-Chr8:71517396 1.30E-64 dispersed
Tan08g1927 Tan-Chr8:71517396 Tan10g1504 Tan-Chr10:23066185 6.80E-69 dispersed
Tan11g0409 Tan-Chr11:3282386 Tan08g1927 Tan-Chr8:71517396 6.60E-60 dispersed
Tan08g1927 Tan-Chr8:71517396 Tan06g0203 Tan-Chr6:1780850 2.10E-102 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67964 PF12819 Malectin_like 1.50E-78 CL0202 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1927 - - - 0.0