Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1943 ATGCTGCTGTTGATTGAAGTTCATCAAATAGTGCAAAAGGAGATTGAATTAAGCATGATTTGGATTCCTTGTTCTGGAGATTCAAACAGGAAGGTCAAGTCCAAGAAATTGAAGAAGTTGGAATCTCAGAAGAGCCGAGTTGATCCGATCAAAGGTGCTTCAGAGAAACTAAAAACAAGTTCTTCCTTCAGTGAAGCCTCGAAAGGTGGAGGATCTGATCATATAAAGGCACAGATATTTTCATTCCGGGAGTTGGCAGCCGCTACCAGGAATTTTAGGGCAGATTGTCTTTTAGGCGAGGGAGGTTTTGGTAGAGTTTACAAAGGAAATTTGGAAAGCATCAATCAGGTTGTGGCAATCAAACAACTTGATCGGAATGGGTTGCAAGGGAATAGGGAGTTTCTTGTTGAAGTGTTGATGTTAAGCCTACTTCATCACCCAAATCTAGTTAATCTGATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTGATATATGAATATATGCCTCTAGGATCTTTAGATGACCATTTACATGATGTTTCACCTGGTACAAAAGTACTAGATTGGAATACAAGAATGAAAATAGCTGCTGGGGCAGCACGAGGATTGGAATATTTGCATGACAAAGCTAGCCCACCAGTTATTTATCGAGATCTAAAAAGTTCCAACATTCTGCTTGATAAAGGTTATCATCCCAAGCTGTCTGATTTTGGGTTGGCTAAACTTGGGCCTGTTGGGGACAATACACATGTGTCTACCAGAGTGATGGGCACTTATGGATATTGTGCTCCTGAATATGCAATGACTGGTCAGTTAACTCTCAAGTCGGATGTTTATAGCTTTGGTGTTGTCCTTTTAGAAATCATAACAGGCAGGAAAGCAATTGATGATTCAAGAGCTGCAGGGGAGCAAAATCTGGTTTCATGGGCAAGACCATTGTTTAAGGACCGTCTGAGATTTGCACAAATGGCAGATCCAACGCTCAGAGGCCAATACCCTTCAAGGGGTCTGTATCAGGCTCTTGCAATTGCAGCAATGTGTGTTCAAGAGCAGCCAAATATGCGCCCTGTGATCGCCGATGTTGTCACAGCCTTATCTTATCTCGCTTCTCAAAGATACGACCCTGGTACGAACATACCCCATGGTTCCCCTGCATCAGCCTGTACTCCTCCAAGAAACAACAGAGATTCTAACAGGAAGCTTAATGGTGGTAGAAGATACGATAGAAATCACACTCGACGACTATAA 1251 42.37 MLLLIEVHQIVQKEIELSMIWIPCSGDSNRKVKSKKLKKLESQKSRVDPIKGASEKLKTSSSFSEASKGGGSDHIKAQIFSFRELAAATRNFRADCLLGEGGFGRVYKGNLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLIYEYMPLGSLDDHLHDVSPGTKVLDWNTRMKIAAGAARGLEYLHDKASPPVIYRDLKSSNILLDKGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDDSRAAGEQNLVSWARPLFKDRLRFAQMADPTLRGQYPSRGLYQALAIAAMCVQEQPNMRPVIADVVTALSYLASQRYDPGTNIPHGSPASACTPPRNNRDSNRKLNGGRRYDRNHTRRL 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 71591498 71595329 + Tan0002283.1 Tan08g1943 761835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1943 416 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1943 416 FunFam Serine/threonine-protein kinase PBS1 169 383 - -
Tan08g1943 416 FunFam Serine/threonine-protein kinase PBS1 65 168 - -
Tan08g1943 416 CDD STKc_IRAK 98 366 - -
Tan08g1943 416 PANTHER OS07G0668900 PROTEIN 45 385 - -
Tan08g1943 416 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524(InterPro)
Tan08g1943 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1943 416 SUPERFAMILY Protein kinase-like (PK-like) 78 374 IPR011009 -
Tan08g1943 416 MobiDBLite consensus disorder prediction 377 398 - -
Tan08g1943 416 Gene3D Phosphorylase Kinase; domain 1 64 168 - -
Tan08g1943 416 MobiDBLite consensus disorder prediction 33 72 - -
Tan08g1943 416 Gene3D Transferase(Phosphotransferase) domain 1 169 378 - -
Tan08g1943 416 Pfam Protein tyrosine and serine/threonine kinase 96 365 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g1943 416 SMART serkin_6 92 369 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g1943 416 MobiDBLite consensus disorder prediction 377 416 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2551 Tan-Chr1:36917313 Tan08g1943 Tan-Chr8:71591498 3.00E-112 dispersed
Tan08g1943 Tan-Chr8:71591498 Tan10g0966 Tan-Chr10:8421793 3.10E-154 dispersed
Tan11g0375 Tan-Chr11:3035853 Tan08g1943 Tan-Chr8:71591498 2.20E-73 dispersed
Tan01g2955 Tan-Chr1:68148626 Tan08g1943 Tan-Chr8:71591498 1.70E-120 transposed
Tan02g2445 Tan-Chr2:93034268 Tan08g1943 Tan-Chr8:71591498 1.50E-46 transposed
Tan04g0375 Tan-Chr4:3103382 Tan08g1943 Tan-Chr8:71591498 3.00E-163 wgd
Tan05g0315 Tan-Chr5:2343838 Tan08g1943 Tan-Chr8:71591498 1.60E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67965 PF07714 PK_Tyr_Ser-Thr 8.70E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1943 - - - 0.0