Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1945 ATGCCACTGCCGAACAACCTCCCCTGTTCGATGGAACTACCAGGTTGTATACTGCTTACATATGCCCTTATGCACATCGCATTTGGATCATACGGAATTACAAGGTTATTGCCTGTTCATTTTGAGGGACTGCATGATAAAATTAAACTAGTTCCTCTCAACCTTTTTAATAGGCCTTCTTGGTATAAAGAGAAAGTATACCCTGTAAACAAGGTGCCATCTCTAGAACATAATGGGAAAGTTATTGGAGAAAGTCTTGTTCTGCTCAAATATATTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATGACCTCGGTAAAAGAGAGTATGCTGAAGAATTGCTATCCTACAGCGAAACGTTTAACGGTACAATAATCTCTTCATTTAAAGGTGACATCTCAAAGGAAGCAGGTGCTCAATTTGATTACTTGGAAAATGCTTTGCAAAAATTTGATGGCCCCTTCCTCCTTGGAGAAATCAGTCAGGTGGATATAGCCTACATTCCATTTGTTGAAAGGTTCCAAGTTTTCTTATTAGAGGCTCTCAAGTATGATATCACAAAAGGAAGGCCTAAACTGGCTGCATGGATTGAGGAGTTCAACAAGATTGATGGATACAAACAAACAAAAGTTGATCCCAAGCTAGTGATTGAAGTTTATACAAAGCAATTCTTGGTAACATTTGCTTTGCATATCTTGCATATAAATACGATTTATCTAAATAATCTATTAGCTATGTTCGTCCGCTAA 753 38.11 MPLPNNLPCSMELPGCILLTYALMHIAFGSYGITRLLPVHFEGLHDKIKLVPLNLFNRPSWYKEKVYPVNKVPSLEHNGKVIGESLVLLKYIDSNFEGPSLLPDDLGKREYAEELLSYSETFNGTIISSFKGDISKEAGAQFDYLENALQKFDGPFLLGEISQVDIAYIPFVERFQVFLLEALKYDITKGRPKLAAWIEEFNKIDGYKQTKVDPKLVIEVYTKQFLVTFALHILHINTIYLNNLLAMFVR 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 71619049 71623171 - Tan0013956.1 Tan08g1945 761837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1945 250 Gene3D Glutaredoxin 21 97 - -
Tan08g1945 250 Gene3D - 98 229 - -
Tan08g1945 250 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 19 100 IPR004045 -
Tan08g1945 250 FunFam Lambda class glutathione S-transferase 98 228 - -
Tan08g1945 250 SUPERFAMILY Thioredoxin-like 40 102 IPR036249 -
Tan08g1945 250 PANTHER GLUTATHIONE S-TRANSFERASE L1 40 234 IPR044629 GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER)
Tan08g1945 250 Pfam Glutathione S-transferase, C-terminal domain 140 199 - -
Tan08g1945 250 Pfam Glutathione S-transferase, N-terminal domain 47 99 IPR004045 -
Tan08g1945 250 SUPERFAMILY GST C-terminal domain-like 96 223 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1945 Tan-Chr8:71619049 Tan08g1947 Tan-Chr8:71630771 2.50E-90 dispersed
Tan08g1945 Tan-Chr8:71619049 Tan08g1946 Tan-Chr8:71630771 2.50E-90 tandem
Tan04g0370 Tan-Chr4:3070642 Tan08g1945 Tan-Chr8:71619049 3.50E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1945 K00799 - csv:101211241 328.946