Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1946 ATGGCTGCCCTCGTGGACGAAGTTCTACCTCCGTCGTTGGACGCCACCGCCGAACAACCTCCTCTGTTCGACGGAACTACCAGGTTGTATACTGCTTACATATGCCCTTATGCTCAACGTGTGTGGATCACTCGGAATTACAAGGGACTACAAGATAAAATTAAGCTAGTTCCTCTAAACCTTTCTAATAGGCCTGACTGGTATAAAGAAAAAGTGTATCCTACAAACAAGGTGCCATCTTTGGAACATAATGGAAAAATTATTGGAGAAAGTCTTGATCTGATCAAATATGTTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATGATCCTGCTAAAAGAGAGTATGCTGAAGAGTTGCTATCCTACAGCGATACGTTTACTGGCGCAATAATCTCTTCCTTTAAAGGTGACACCATAAAGGAAGCAGGTGCTCAATTTGATTATTTGGAGAACGCTCTGCAAAAATTCGATGGCCCCTTTCTCCTTGGAGAAATCAGTCAGGCGGATATAGCATACATTCCATTTGTTGAAAGGCTCCAAGTTTTCTTATTGGAGGCTCTCAAGATTGACATCACAGAAGGAAGGCCTAAACTAGCTGCATGGATTGAGGAATTCAACAAGATTGGTGCGTATAAACAAACAAAAGCCGATCCCAAGCTGATCGTTGAAGTTTATACAAATCGATACTTGGTTAAAAACAAATGA 711 41.77 MAALVDEVLPPSLDATAEQPPLFDGTTRLYTAYICPYAQRVWITRNYKGLQDKIKLVPLNLSNRPDWYKEKVYPTNKVPSLEHNGKIIGESLDLIKYVDSNFEGPSLLPDDPAKREYAEELLSYSDTFTGAIISSFKGDTIKEAGAQFDYLENALQKFDGPFLLGEISQADIAYIPFVERLQVFLLEALKIDITEGRPKLAAWIEEFNKIGAYKQTKADPKLIVEVYTNRYLVKNK 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 71630771 71634991 + Tan0014445.1 Tan08g1946 761838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1946 236 SFLD Glutathione Transferase (cytosolic) 28 207 IPR040079 -
Tan08g1946 236 Gene3D Glutaredoxin 1 103 - -
Tan08g1946 236 FunFam Glutathione S-transferase L2, chloroplastic 1 103 - -
Tan08g1946 236 SUPERFAMILY GST C-terminal domain-like 102 230 IPR036282 -
Tan08g1946 236 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
Tan08g1946 236 FunFam Lambda class glutathione S-transferase 104 234 - -
Tan08g1946 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Tan08g1946 236 PANTHER GLUTATHIONE S-TRANSFERASE L1 2 234 IPR044629 GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER)
Tan08g1946 236 Pfam Glutathione S-transferase, C-terminal domain 145 205 - -
Tan08g1946 236 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Tan08g1946 236 SFLD Main (cytGST) 28 207 - -
Tan08g1946 236 Gene3D - 104 235 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1946 Tan-Chr8:71630771 Tan08g1948 Tan-Chr8:71639491 3.70E-104 dispersed
Tan08g1945 Tan-Chr8:71619049 Tan08g1946 Tan-Chr8:71630771 2.50E-90 tandem
Tan08g1946 Tan-Chr8:71630771 Tan08g1947 Tan-Chr8:71630771 1.00E-133 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1946 K00799 - csv:101211241 430.254