Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g1946 | ATGGCTGCCCTCGTGGACGAAGTTCTACCTCCGTCGTTGGACGCCACCGCCGAACAACCTCCTCTGTTCGACGGAACTACCAGGTTGTATACTGCTTACATATGCCCTTATGCTCAACGTGTGTGGATCACTCGGAATTACAAGGGACTACAAGATAAAATTAAGCTAGTTCCTCTAAACCTTTCTAATAGGCCTGACTGGTATAAAGAAAAAGTGTATCCTACAAACAAGGTGCCATCTTTGGAACATAATGGAAAAATTATTGGAGAAAGTCTTGATCTGATCAAATATGTTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATGATCCTGCTAAAAGAGAGTATGCTGAAGAGTTGCTATCCTACAGCGATACGTTTACTGGCGCAATAATCTCTTCCTTTAAAGGTGACACCATAAAGGAAGCAGGTGCTCAATTTGATTATTTGGAGAACGCTCTGCAAAAATTCGATGGCCCCTTTCTCCTTGGAGAAATCAGTCAGGCGGATATAGCATACATTCCATTTGTTGAAAGGCTCCAAGTTTTCTTATTGGAGGCTCTCAAGATTGACATCACAGAAGGAAGGCCTAAACTAGCTGCATGGATTGAGGAATTCAACAAGATTGGTGCGTATAAACAAACAAAAGCCGATCCCAAGCTGATCGTTGAAGTTTATACAAATCGATACTTGGTTAAAAACAAATGA | 711 | 41.77 | MAALVDEVLPPSLDATAEQPPLFDGTTRLYTAYICPYAQRVWITRNYKGLQDKIKLVPLNLSNRPDWYKEKVYPTNKVPSLEHNGKIIGESLDLIKYVDSNFEGPSLLPDDPAKREYAEELLSYSDTFTGAIISSFKGDTIKEAGAQFDYLENALQKFDGPFLLGEISQADIAYIPFVERLQVFLLEALKIDITEGRPKLAAWIEEFNKIGAYKQTKADPKLIVEVYTNRYLVKNK | 236 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 71630771 | 71634991 | + | Tan0014445.1 | Tan08g1946 | 761838 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g1946 | 236 | SFLD | Glutathione Transferase (cytosolic) | 28 | 207 | IPR040079 | - | |
Tan08g1946 | 236 | Gene3D | Glutaredoxin | 1 | 103 | - | - | |
Tan08g1946 | 236 | FunFam | Glutathione S-transferase L2, chloroplastic | 1 | 103 | - | - | |
Tan08g1946 | 236 | SUPERFAMILY | GST C-terminal domain-like | 102 | 230 | IPR036282 | - | |
Tan08g1946 | 236 | SUPERFAMILY | Thioredoxin-like | 20 | 107 | IPR036249 | - | |
Tan08g1946 | 236 | FunFam | Lambda class glutathione S-transferase | 104 | 234 | - | - | |
Tan08g1946 | 236 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 25 | 106 | IPR004045 | - | |
Tan08g1946 | 236 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 2 | 234 | IPR044629 | GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER) | |
Tan08g1946 | 236 | Pfam | Glutathione S-transferase, C-terminal domain | 145 | 205 | - | - | |
Tan08g1946 | 236 | Pfam | Glutathione S-transferase, N-terminal domain | 29 | 105 | IPR004045 | - | |
Tan08g1946 | 236 | SFLD | Main (cytGST) | 28 | 207 | - | - | |
Tan08g1946 | 236 | Gene3D | - | 104 | 235 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g1946 | Tan-Chr8:71630771 | Tan08g1948 | Tan-Chr8:71639491 | 3.70E-104 | dispersed | |
Tan08g1945 | Tan-Chr8:71619049 | Tan08g1946 | Tan-Chr8:71630771 | 2.50E-90 | tandem | |
Tan08g1946 | Tan-Chr8:71630771 | Tan08g1947 | Tan-Chr8:71630771 | 1.00E-133 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g1946 | K00799 | - | csv:101211241 | 430.254 |