Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g1948 | ATGGCTACTCTAACTATGGTGCCGGAAGTTCGTCCGCCGTCATTGGAAGCCGACGCCGAACAGCCTCCGCTCTTCGACGGAACCACCAGGTTGTATATGGCTTACTATTGCCCGTTTGCACAGCGTGCTTGGATCACTAGAAATTACAAGGGATTACAAGATAAAATTAAACTAGTGCCTCTAAACCTTCAAAACAGGCCTGCCTGGTATAAGGAAAAAGTCCACCCTTCAAACAAGGTGCCAGCTTTGGAACACAATGGGAAAGTGATTGGAGAAAGCCTTGATTTGATAAAATACATAGACAGCAACTTTGAAGGACCTTCTCTTTTTCCAGATGATCCTGCTAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACTGATACATTTACTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGCCAAGGAAGCAGGTCCTCAATTTGATTACCTGGAGAATGCTCTGCAGAAATTTGATGATGGGCCATTCTTTTTGGGTCAATTCAGTGGGGTGGACATTGCATACATCACATTTATTGAAAGGTTCCATGTTTTCTTAGCTGATGTTTTCAAATATGATATCACAGAAGGAAGGCCTAATCTAGCGGCATGGATTGAGGAGTTCAACAAGATTGATGCTTACAAGCAAACAAAATATGATCCTAAAGCCATTGTTGAACTTTACAAGAAGCGCTTCATGGCTTAA | 711 | 42.48 | MATLTMVPEVRPPSLEADAEQPPLFDGTTRLYMAYYCPFAQRAWITRNYKGLQDKIKLVPLNLQNRPAWYKEKVHPSNKVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDPAKRQFGEELLAYTDTFTGAVYPSFKGDPAKEAGPQFDYLENALQKFDDGPFFLGQFSGVDIAYITFIERFHVFLADVFKYDITEGRPNLAAWIEEFNKIDAYKQTKYDPKAIVELYKKRFMA | 236 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 71639491 | 71643108 | - | Tan0005404.1 | Tan08g1948 | 761840 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g1948 | 236 | FunFam | Glutathione S-transferase L2, chloroplastic | 2 | 105 | - | - | |
Tan08g1948 | 236 | CDD | GST_C_Lambda | 113 | 231 | - | - | |
Tan08g1948 | 236 | SFLD | Glutathione Transferase (cytosolic) | 30 | 210 | IPR040079 | - | |
Tan08g1948 | 236 | SUPERFAMILY | GST C-terminal domain-like | 104 | 234 | IPR036282 | - | |
Tan08g1948 | 236 | Gene3D | - | 106 | 236 | - | - | |
Tan08g1948 | 236 | SUPERFAMILY | Thioredoxin-like | 21 | 109 | IPR036249 | - | |
Tan08g1948 | 236 | FunFam | Lambda class glutathione S-transferase | 106 | 236 | - | - | |
Tan08g1948 | 236 | Pfam | Glutathione S-transferase, C-terminal domain | 150 | 208 | - | - | |
Tan08g1948 | 236 | Pfam | Glutathione S-transferase, N-terminal domain | 31 | 107 | IPR004045 | - | |
Tan08g1948 | 236 | Gene3D | Glutaredoxin | 2 | 105 | - | - | |
Tan08g1948 | 236 | SFLD | Main (cytGST) | 30 | 210 | - | - | |
Tan08g1948 | 236 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 27 | 108 | IPR004045 | - | |
Tan08g1948 | 236 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 6 | 235 | IPR044629 | GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0370 | Tan-Chr4:3070642 | Tan08g1948 | Tan-Chr8:71639491 | 8.60E-90 | dispersed | |
Tan04g0371 | Tan-Chr4:3070642 | Tan08g1948 | Tan-Chr8:71639491 | 4.00E-90 | dispersed | |
Tan08g1946 | Tan-Chr8:71630771 | Tan08g1948 | Tan-Chr8:71639491 | 3.70E-104 | dispersed | |
Tan08g1947 | Tan-Chr8:71630771 | Tan08g1948 | Tan-Chr8:71639491 | 3.70E-104 | tandem | |
Tan08g1948 | Tan-Chr8:71639491 | Tan08g1949 | Tan-Chr8:71640516 | 8.60E-85 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g1948 | K00799 | - | csv:101210004 | 457.218 |