Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1948 ATGGCTACTCTAACTATGGTGCCGGAAGTTCGTCCGCCGTCATTGGAAGCCGACGCCGAACAGCCTCCGCTCTTCGACGGAACCACCAGGTTGTATATGGCTTACTATTGCCCGTTTGCACAGCGTGCTTGGATCACTAGAAATTACAAGGGATTACAAGATAAAATTAAACTAGTGCCTCTAAACCTTCAAAACAGGCCTGCCTGGTATAAGGAAAAAGTCCACCCTTCAAACAAGGTGCCAGCTTTGGAACACAATGGGAAAGTGATTGGAGAAAGCCTTGATTTGATAAAATACATAGACAGCAACTTTGAAGGACCTTCTCTTTTTCCAGATGATCCTGCTAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACTGATACATTTACTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGCCAAGGAAGCAGGTCCTCAATTTGATTACCTGGAGAATGCTCTGCAGAAATTTGATGATGGGCCATTCTTTTTGGGTCAATTCAGTGGGGTGGACATTGCATACATCACATTTATTGAAAGGTTCCATGTTTTCTTAGCTGATGTTTTCAAATATGATATCACAGAAGGAAGGCCTAATCTAGCGGCATGGATTGAGGAGTTCAACAAGATTGATGCTTACAAGCAAACAAAATATGATCCTAAAGCCATTGTTGAACTTTACAAGAAGCGCTTCATGGCTTAA 711 42.48 MATLTMVPEVRPPSLEADAEQPPLFDGTTRLYMAYYCPFAQRAWITRNYKGLQDKIKLVPLNLQNRPAWYKEKVHPSNKVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDPAKRQFGEELLAYTDTFTGAVYPSFKGDPAKEAGPQFDYLENALQKFDDGPFFLGQFSGVDIAYITFIERFHVFLADVFKYDITEGRPNLAAWIEEFNKIDAYKQTKYDPKAIVELYKKRFMA 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 71639491 71643108 - Tan0005404.1 Tan08g1948 761840

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1948 236 FunFam Glutathione S-transferase L2, chloroplastic 2 105 - -
Tan08g1948 236 CDD GST_C_Lambda 113 231 - -
Tan08g1948 236 SFLD Glutathione Transferase (cytosolic) 30 210 IPR040079 -
Tan08g1948 236 SUPERFAMILY GST C-terminal domain-like 104 234 IPR036282 -
Tan08g1948 236 Gene3D - 106 236 - -
Tan08g1948 236 SUPERFAMILY Thioredoxin-like 21 109 IPR036249 -
Tan08g1948 236 FunFam Lambda class glutathione S-transferase 106 236 - -
Tan08g1948 236 Pfam Glutathione S-transferase, C-terminal domain 150 208 - -
Tan08g1948 236 Pfam Glutathione S-transferase, N-terminal domain 31 107 IPR004045 -
Tan08g1948 236 Gene3D Glutaredoxin 2 105 - -
Tan08g1948 236 SFLD Main (cytGST) 30 210 - -
Tan08g1948 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 108 IPR004045 -
Tan08g1948 236 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 235 IPR044629 GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1948 K00799 - - csv:101210004 457.218
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0370 Tan-Chr4:3070642 Tan08g1948 Tan-Chr8:71639491 8.60E-90 dispersed
Tan04g0371 Tan-Chr4:3070642 Tan08g1948 Tan-Chr8:71639491 4.00E-90 dispersed
Tan08g1946 Tan-Chr8:71630771 Tan08g1948 Tan-Chr8:71639491 3.70E-104 dispersed
Tan08g1947 Tan-Chr8:71630771 Tan08g1948 Tan-Chr8:71639491 3.70E-104 tandem
Tan08g1948 Tan-Chr8:71639491 Tan08g1949 Tan-Chr8:71640516 8.60E-85 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan06g0843 . 1 209 Glutathione S-transferase Gene Family AT4G02520 57.5 2.6e-64 242.7
Tan06g0841 . 5 210 Glutathione S-transferase Gene Family AT4G02520 58.4 3.2e-62 235.7
Tan06g0839 . 1 210 Glutathione S-transferase Gene Family AT4G02520 58.2 2.7e-61 232.6
Tan06g0840 . 1 209 Glutathione S-transferase Gene Family AT4G02520 54.7 3.0e-60 229.2
Tan06g0842 . 13 155 Glutathione S-transferase Gene Family AT4G02520 55.5 1.2e-37 154.1
Tan06g0843 . 1 209 Glutathione S-transferase Gene Family AT2G02930 58.5 3.4e-64 242.3
Tan06g0839 . 1 211 Glutathione S-transferase Gene Family AT2G02930 58.9 4.1e-62 235.3
Tan06g0841 . 5 211 Glutathione S-transferase Gene Family AT2G02930 58.1 1.2e-61 233.8
Tan06g0840 . 1 210 Glutathione S-transferase Gene Family AT2G02930 54.9 5.1e-60 228.4
Tan06g0842 . 13 156 Glutathione S-transferase Gene Family AT2G02930 54.4 1.8e-36 150.2
Tan06g0843 . 5 206 Glutathione S-transferase Gene Family AT1G02950 55.2 1.7e-62 236.9
Tan06g0841 . 6 207 Glutathione S-transferase Gene Family AT1G02950 53.7 1.4e-56 217.2
Tan06g0839 . 6 207 Glutathione S-transferase Gene Family AT1G02950 54.7 2.4e-56 216.5
Tan06g0840 . 5 206 Glutathione S-transferase Gene Family AT1G02950 51.2 2.0e-55 213.4
Tan06g0839 . 1 211 Glutathione S-transferase Gene Family AT1G02930 59.2 1.1e-62 237.3
Tan06g0843 . 1 209 Glutathione S-transferase Gene Family AT1G02930 56.5 1.4e-62 236.9
Tan06g0840 . 1 210 Glutathione S-transferase Gene Family AT1G02930 54.8 7.7e-61 231.1
Tan06g0841 . 5 211 Glutathione S-transferase Gene Family AT1G02930 55.6 8.5e-60 227.6
Tan06g0839 . 1 211 Glutathione S-transferase Gene Family AT1G02920 59.7 1.3e-63 240.4
Tan06g0843 . 1 209 Glutathione S-transferase Gene Family AT1G02920 56.0 6.3e-63 238.0
Tan06g0840 . 1 210 Glutathione S-transferase Gene Family AT1G02920 56.2 2.4e-62 236.1
Tan06g0841 . 5 211 Glutathione S-transferase Gene Family AT1G02920 56.5 2.7e-61 232.6
Tan06g0842 . 13 156 Glutathione S-transferase Gene Family AT1G02920 54.9 9.2e-38 154.5
Tan06g0843 . 1 215 Glutathione S-transferase Gene Family AT2G47730 57.9 2.5e-69 259.6
Tan06g0841 . 1 215 Glutathione S-transferase Gene Family AT2G47730 58.3 6.5e-65 245.0
Tan06g0840 . 1 213 Glutathione S-transferase Gene Family AT2G47730 57.0 1.2e-63 240.7
Tan06g0839 . 5 214 Glutathione S-transferase Gene Family AT2G47730 58.3 7.9e-63 238.0
Tan06g0842 . 13 160 Glutathione S-transferase Gene Family AT2G47730 55.7 1.2e-39 161.0
Tan06g0845 . 6 216 Glutathione S-transferase Gene Family AT3G62760 61.6 9.5e-78 287.3
Tan03g0877 . 3 215 Glutathione S-transferase Gene Family AT3G09270 52.3 3.4e-62 235.7
Tan03g0861 . 3 215 Glutathione S-transferase Gene Family AT3G09270 53.7 1.7e-61 233.4
Tan03g0874 . 3 212 Glutathione S-transferase Gene Family AT3G09270 54.0 2.2e-61 233.0
Tan03g0878 . 3 218 Glutathione S-transferase Gene Family AT3G09270 53.0 3.7e-61 232.3
Tan03g0860 . 3 215 Glutathione S-transferase Gene Family AT3G09270 50.9 7.0e-60 228.0
Tan03g0879 . 37 242 Glutathione S-transferase Gene Family AT3G09270 53.4 9.1e-60 227.6
Tan03g0873 . 3 212 Glutathione S-transferase Gene Family AT3G09270 50.7 2.3e-58 223.0
Tan04g1142 . 7 219 Glutathione S-transferase Gene Family AT1G69930 55.1 6.4e-64 241.5
Tan04g1143 . 2 218 Glutathione S-transferase Gene Family AT1G69930 53.0 1.7e-61 233.4
Tan04g1142 . 7 218 Glutathione S-transferase Gene Family AT1G69920 53.5 4.1e-56 215.7
Tan04g1142 . 1 218 Glutathione S-transferase Gene Family AT1G27130 52.5 1.2e-62 237.3
Tan04g1143 . 1 218 Glutathione S-transferase Gene Family AT1G27130 52.0 2.9e-61 232.6
Tan04g1143 . 1 225 Glutathione S-transferase Gene Family AT1G59670 50.9 5.0e-61 231.9
Tan04g1142 . 1 221 Glutathione S-transferase Gene Family AT1G59670 53.6 7.3e-60 228.0
Tan04g1143 . 1 223 Glutathione S-transferase Gene Family AT1G59700 54.4 1.2e-65 247.3
Tan04g1142 . 1 221 Glutathione S-transferase Gene Family AT1G59700 54.0 1.6e-62 236.9
Tan04g1143 . 4 223 Glutathione S-transferase Gene Family AT1G10370 64.0 2.4e-76 282.7
Tan04g1142 . 6 218 Glutathione S-transferase Gene Family AT1G10370 61.9 1.6e-72 270.0
Tan04g1143 . 5 223 Glutathione S-transferase Gene Family AT1G10360 62.0 8.6e-74 274.2
Tan04g1142 . 5 220 Glutathione S-transferase Gene Family AT1G10360 59.6 2.8e-72 269.2
Tan01g0952 . 1 217 Glutathione S-transferase Gene Family AT1G78380 69.1 1.5e-83 306.6
Tan11g1445 . 5 222 Glutathione S-transferase Gene Family AT1G78380 56.4 8.9e-68 254.2
Tan01g0952 . 7 214 Glutathione S-transferase Gene Family AT1G78370 63.9 2.0e-75 279.6
Tan11g1445 . 8 221 Glutathione S-transferase Gene Family AT1G78370 53.7 2.3e-63 239.6
Tan01g0952 . 1 214 Glutathione S-transferase Gene Family AT1G78340 65.0 3.3e-78 288.9
Tan11g1445 . 5 220 Glutathione S-transferase Gene Family AT1G78340 52.3 6.6e-63 238.0
Tan10g0407 . 1 156 Glutathione S-transferase Gene Family AT1G78340 51.6 3.8e-42 169.1
Tan01g0952 . 1 206 Glutathione S-transferase Gene Family AT1G78320 53.4 8.2e-57 217.6
Tan01g0952 . 1 218 Glutathione S-transferase Gene Family AT1G17180 66.1 8.1e-85 310.8
Tan11g1445 . 5 225 Glutathione S-transferase Gene Family AT1G17180 54.8 5.3e-68 255.0
Tan10g0407 . 1 156 Glutathione S-transferase Gene Family AT1G17180 51.6 5.5e-41 165.2
Tan01g0952 . 2 218 Glutathione S-transferase Gene Family AT1G17190 57.1 5.4e-73 271.6
Tan01g0952 . 3 213 Glutathione S-transferase Gene Family AT3G43800 57.5 6.4e-69 258.1
Tan01g0952 . 1 218 Glutathione S-transferase Gene Family AT1G53680 55.6 3.6e-64 242.3
Tan11g1445 . 6 225 Glutathione S-transferase Gene Family AT1G53680 54.1 6.1e-64 241.5
Tan05g0048 . 51 221 Glutathione S-transferase Gene Family AT2G02390 67.3 1.3e-62 236.9
Tan05g0045 . 49 219 Glutathione S-transferase Gene Family AT2G02390 65.5 1.2e-60 230.3
Tan05g0044 . 49 231 Glutathione S-transferase Gene Family AT2G02390 61.2 5.6e-58 221.5
Tan05g0049 . 51 187 Glutathione S-transferase Gene Family AT2G02390 71.5 7.9e-52 201.1
Tan10g0356 . 61 227 Glutathione S-transferase Gene Family AT2G02390 55.1 4.8e-49 191.8
Tan05g0050 . 51 169 Glutathione S-transferase Gene Family AT2G02390 62.8 2.5e-42 169.5
Tan05g0051 . 51 176 Glutathione S-transferase Gene Family AT2G02390 65.9 9.6e-42 167.5
Tan05g0046 . 49 165 Glutathione S-transferase Gene Family AT2G02390 68.4 4.0e-40 162.2
Tan05g0048 . 10 220 Glutathione S-transferase Gene Family AT2G02380 64.0 4.1e-76 282.0
Tan05g0045 . 5 217 Glutathione S-transferase Gene Family AT2G02380 62.0 5.0e-74 275.0
Tan05g0044 . 5 229 Glutathione S-transferase Gene Family AT2G02380 58.7 2.3e-71 266.2
Tan05g0049 . 10 187 Glutathione S-transferase Gene Family AT2G02380 66.3 1.9e-65 246.5
Tan10g0356 . 18 226 Glutathione S-transferase Gene Family AT2G02380 55.5 1.8e-63 240.0
Tan05g0051 . 10 176 Glutathione S-transferase Gene Family AT2G02380 62.9 5.5e-57 218.4
Tan05g0050 . 10 169 Glutathione S-transferase Gene Family AT2G02380 60.7 1.2e-56 217.2
Tan05g0046 . 5 165 Glutathione S-transferase Gene Family AT2G02380 62.1 7.5e-54 208.0
Tan01g1172 . 1 229 Glutathione S-transferase Gene Family AT5G41210 71.6 4.0e-93 338.6
Tan01g1174 . 1 186 Glutathione S-transferase Gene Family AT5G41210 74.7 5.8e-76 281.6
Tan01g1173 . 13 177 Glutathione S-transferase Gene Family AT5G41210 69.1 2.2e-62 236.5
Tan01g1172 . 1 237 Glutathione S-transferase Gene Family AT5G41240 67.9 2.5e-88 323.9
Tan01g1174 . 1 186 Glutathione S-transferase Gene Family AT5G41240 72.0 7.2e-72 269.2
Tan01g1173 . 13 185 Glutathione S-transferase Gene Family AT5G41240 63.6 5.9e-58 223.0
Tan08g1948 . 9 235 Glutathione S-transferase Gene Family AT5G02780 69.7 5.8e-89 324.7
Tan08g1946 . 13 227 Glutathione S-transferase Gene Family AT5G02780 67.3 1.5e-81 300.1
Tan08g1947 . 14 228 Glutathione S-transferase Gene Family AT5G02780 67.3 1.5e-81 300.1
Tan04g0370 . 75 294 Glutathione S-transferase Gene Family AT5G02780 65.8 1.4e-79 293.5
Tan04g0371 . 75 294 Glutathione S-transferase Gene Family AT5G02780 65.8 1.4e-79 293.5
Tan08g1945 . 40 226 Glutathione S-transferase Gene Family AT5G02780 63.0 4.2e-63 238.8
Tan08g1949 . 9 155 Glutathione S-transferase Gene Family AT5G02780 67.6 2.5e-55 213.0
Tan04g0370 . 52 292 Glutathione S-transferase Gene Family AT3G55040 64.5 8.2e-85 311.2
Tan04g0371 . 52 292 Glutathione S-transferase Gene Family AT3G55040 64.5 8.2e-85 311.2
Tan08g1948 . 4 236 Glutathione S-transferase Gene Family AT3G55040 61.4 1.9e-81 300.1
Tan08g1946 . 3 230 Glutathione S-transferase Gene Family AT3G55040 56.3 5.0e-74 275.4
Tan08g1947 . 12 231 Glutathione S-transferase Gene Family AT3G55040 57.5 1.9e-73 273.5
Tan08g1945 . 40 221 Glutathione S-transferase Gene Family AT3G55040 55.2 2.7e-56 216.5
Tan08g1949 . 4 146 Glutathione S-transferase Gene Family AT3G55040 61.5 1.0e-47 188.0
Tan08g1948 . 1 235 Glutathione S-transferase Gene Family AT5G02790 70.2 1.8e-95 346.3
Tan08g1946 . 7 232 Glutathione S-transferase Gene Family AT5G02790 67.4 7.0e-87 317.8
Tan08g1947 . 8 233 Glutathione S-transferase Gene Family AT5G02790 67.4 7.0e-87 317.8
Tan04g0370 . 69 294 Glutathione S-transferase Gene Family AT5G02790 61.7 1.3e-80 297.0
Tan04g0371 . 69 294 Glutathione S-transferase Gene Family AT5G02790 61.7 1.3e-80 297.0
Tan08g1945 . 40 226 Glutathione S-transferase Gene Family AT5G02790 66.0 3.9e-69 258.8
Tan08g1949 . 1 155 Glutathione S-transferase Gene Family AT5G02790 67.7 1.1e-58 224.2
Tan04g0340 . 443 652 Glutathione S-transferase Gene Family AT1G19570 68.7 3.6e-82 302.0
Tan04g0339 . 1 211 Glutathione S-transferase Gene Family AT1G19570 62.7 1.5e-75 280.0
Tan04g2034 . 64 271 Glutathione S-transferase Gene Family AT1G19570 60.8 2.4e-73 272.7
Tan04g2035 . 64 245 Glutathione S-transferase Gene Family AT1G19570 62.3 5.3e-65 245.0
Tan04g0340 . 219 430 Glutathione S-transferase Gene Family AT1G75270 73.7 2.8e-90 328.9
Tan04g0339 . 1 212 Glutathione S-transferase Gene Family AT1G75270 65.7 5.2e-81 298.1
Tan04g2034 . 64 271 Glutathione S-transferase Gene Family AT1G75270 62.2 4.7e-74 275.0
Tan04g2035 . 64 245 Glutathione S-transferase Gene Family AT1G75270 62.8 4.0e-65 245.4
Tan04g2034 . 9 273 Glutathione S-transferase Gene Family AT5G16710 67.4 3.8e-102 368.6
Tan04g2035 . 9 245 Glutathione S-transferase Gene Family AT5G16710 66.5 6.3e-89 324.7
Tan04g0340 . 221 428 Glutathione S-transferase Gene Family AT5G16710 61.5 2.6e-74 276.2
Tan04g0339 . 3 210 Glutathione S-transferase Gene Family AT5G16710 54.8 5.2e-67 251.9
Tan01g4065 . 1 267 Glutathione S-transferase Gene Family AT1G77290 70.4 3.3e-109 392.1
Tan01g4064 . 1 267 Glutathione S-transferase Gene Family AT1G77290 70.4 3.3e-109 392.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000664 2 7 0 1 1 2 3 2 3 3 1 3 2 4 4 3 3 4 2 2 4 3 3 4 5 3 2 8 6 4 94