Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1948 ATGGCTACTCTAACTATGGTGCCGGAAGTTCGTCCGCCGTCATTGGAAGCCGACGCCGAACAGCCTCCGCTCTTCGACGGAACCACCAGGTTGTATATGGCTTACTATTGCCCGTTTGCACAGCGTGCTTGGATCACTAGAAATTACAAGGGATTACAAGATAAAATTAAACTAGTGCCTCTAAACCTTCAAAACAGGCCTGCCTGGTATAAGGAAAAAGTCCACCCTTCAAACAAGGTGCCAGCTTTGGAACACAATGGGAAAGTGATTGGAGAAAGCCTTGATTTGATAAAATACATAGACAGCAACTTTGAAGGACCTTCTCTTTTTCCAGATGATCCTGCTAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACTGATACATTTACTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGCCAAGGAAGCAGGTCCTCAATTTGATTACCTGGAGAATGCTCTGCAGAAATTTGATGATGGGCCATTCTTTTTGGGTCAATTCAGTGGGGTGGACATTGCATACATCACATTTATTGAAAGGTTCCATGTTTTCTTAGCTGATGTTTTCAAATATGATATCACAGAAGGAAGGCCTAATCTAGCGGCATGGATTGAGGAGTTCAACAAGATTGATGCTTACAAGCAAACAAAATATGATCCTAAAGCCATTGTTGAACTTTACAAGAAGCGCTTCATGGCTTAA 711 42.48 MATLTMVPEVRPPSLEADAEQPPLFDGTTRLYMAYYCPFAQRAWITRNYKGLQDKIKLVPLNLQNRPAWYKEKVHPSNKVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDPAKRQFGEELLAYTDTFTGAVYPSFKGDPAKEAGPQFDYLENALQKFDDGPFFLGQFSGVDIAYITFIERFHVFLADVFKYDITEGRPNLAAWIEEFNKIDAYKQTKYDPKAIVELYKKRFMA 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 71639491 71643108 - Tan0005404.1 Tan08g1948 761840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1948 236 FunFam Glutathione S-transferase L2, chloroplastic 2 105 - -
Tan08g1948 236 CDD GST_C_Lambda 113 231 - -
Tan08g1948 236 SFLD Glutathione Transferase (cytosolic) 30 210 IPR040079 -
Tan08g1948 236 SUPERFAMILY GST C-terminal domain-like 104 234 IPR036282 -
Tan08g1948 236 Gene3D - 106 236 - -
Tan08g1948 236 SUPERFAMILY Thioredoxin-like 21 109 IPR036249 -
Tan08g1948 236 FunFam Lambda class glutathione S-transferase 106 236 - -
Tan08g1948 236 Pfam Glutathione S-transferase, C-terminal domain 150 208 - -
Tan08g1948 236 Pfam Glutathione S-transferase, N-terminal domain 31 107 IPR004045 -
Tan08g1948 236 Gene3D Glutaredoxin 2 105 - -
Tan08g1948 236 SFLD Main (cytGST) 30 210 - -
Tan08g1948 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 108 IPR004045 -
Tan08g1948 236 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 235 IPR044629 GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0370 Tan-Chr4:3070642 Tan08g1948 Tan-Chr8:71639491 8.60E-90 dispersed
Tan04g0371 Tan-Chr4:3070642 Tan08g1948 Tan-Chr8:71639491 4.00E-90 dispersed
Tan08g1946 Tan-Chr8:71630771 Tan08g1948 Tan-Chr8:71639491 3.70E-104 dispersed
Tan08g1947 Tan-Chr8:71630771 Tan08g1948 Tan-Chr8:71639491 3.70E-104 tandem
Tan08g1948 Tan-Chr8:71639491 Tan08g1949 Tan-Chr8:71640516 8.60E-85 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1948 K00799 - csv:101210004 457.218