Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1949 ATGGCTACTCTAACTATGGTGCCGGAAGTTCGTCCGCCGTCATTGGAAGCCGACGCCGAACAGCCTCCGCTCTTCGACGGAACCACCAGGTTGTATATGGCTTACTATTGCCCGTTTGCACAGCGTGCTTGGATCACTAGAAATTACAAGGGATTACAAGATAAAATTAAACTAGTGCCTCTAAACCTTCAAAACAGGCCTGCCTGGTATAAGGAAAAAGTCCACCCTTCAAACAAGGTGCCAGCTTTGGAACACAATGGGAAAGTGATTGGAGAAAGCCTTGATTTGATAAAATACATAGACAGCAACTTTGAAGGACCTTCTCTTTTTCCAGATGATCCTGCTAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACTGATACATTTACTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGCCAAGGAAGCAGGCAAAAGCCCCTCATCTCTTTCAAATCTTTTCCTTAGTTTAGAAACAAGAGCTGATTTTAATAAATTTTTCTTTAGGTCCTCAATTTGA 528 42.61 MATLTMVPEVRPPSLEADAEQPPLFDGTTRLYMAYYCPFAQRAWITRNYKGLQDKIKLVPLNLQNRPAWYKEKVHPSNKVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDPAKRQFGEELLAYTDTFTGAVYPSFKGDPAKEAGKSPSSLSNLFLSLETRADFNKFFFRSSI 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 71640516 71643108 - Tan0005404.2 Tan08g1949 761841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1949 175 FunFam Glutathione S-transferase L2, chloroplastic 2 105 - -
Tan08g1949 175 Gene3D - 106 173 - -
Tan08g1949 175 Gene3D Glutaredoxin 2 105 - -
Tan08g1949 175 Pfam Glutathione S-transferase, N-terminal domain 31 107 IPR004045 -
Tan08g1949 175 SUPERFAMILY Thioredoxin-like 21 109 IPR036249 -
Tan08g1949 175 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 108 IPR004045 -
Tan08g1949 175 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 150 IPR044629 GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1947 Tan-Chr8:71630771 Tan08g1949 Tan-Chr8:71640516 8.10E-67 dispersed
Tan08g1948 Tan-Chr8:71639491 Tan08g1949 Tan-Chr8:71640516 8.60E-85 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1949 K00799 - csv:101210004 293.508