Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g1951 | ATGGTTAAACCCTGCTGGAAACCCCATGATGATGACGATTCGAACGGGCGAGTAGATGGATTGTTGTGGTCTAAGGATCTGGGACACCATGTTTATGGACAATTCTCCATGGCTGTCATCCAAGCTAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGAATTGAGTATGTCCAATCCAGGTCCGCAGGGGACCTTTGTCGGAGTTTATGATGGTCATGGTGGAACCGAAGCTTCACGGTTCGTCAACGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTGCACCAAAACATATCAGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGATTTCTCTCTCTTGTCCAGAAACAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTGGGGATCATTTGCAATGGACAGCTATATATTGCAAATGCGGGCGATTCGCGAGTAGTGCTTGGTAGAACTGAGAGAGCCACTAAAGAAGTCATTGCCATTCAATTGTCCACAGAACACAATGCAAGCATAGAATCAGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCTCAGATTGTGATCTTAAAACACAATGTTTGGCGGGTTAAAGGTCTCATACAGGTTTCAAGATCCATTGGTGATGCATATTTGAAAAAGGCAAAGTTCAACAGACCTCCTCTGCCGCCTAAATTTCAACTGCCTGAGCCATTTTACAAACCGATCCTCAGCGCAGAACCATCGATACTCGTACACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGCCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTGTCCTCGAAATGGAATAGCAAGGAGACTTGTCAAGGCTGCACTTCGAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGACAGAGGTGTGAGAAGGCATTTCCACGATGACATTTCTGTTGTAGTTGTGTTCTTAGATCCTCATTTGATCAATGGTAGGCCCTCCCCTTGTTCCTTGTCAATCAGAGGAGGAGAAGGTCTCCCTTCGTCGGCAAACTCCTAG | 1113 | 44.92 | MVKPCWKPHDDDDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGELSMSNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQNISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATKEVIAIQLSTEHNASIESVRDELRMVHPEDPQIVILKHNVWRVKGLIQVSRSIGDAYLKKAKFNRPPLPPKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSCPRNGIARRLVKAALREAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPHLINGRPSPCSLSIRGGEGLPSSANS | 370 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 71647066 | 71650228 | - | Tan0005933.1 | Tan08g1951 | 761843 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g1951 | 370 | ProSitePatterns | PPM-type phosphatase domain signature. | 68 | 76 | IPR000222 | GO:0043169(InterPro) | |
| Tan08g1951 | 370 | PANTHER | PROTEIN PHOSPHATASE | 28 | 341 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
| Tan08g1951 | 370 | Gene3D | - | 23 | 349 | IPR036457 | - | |
| Tan08g1951 | 370 | ProSiteProfiles | PPM-type phosphatase domain profile. | 42 | 342 | IPR001932 | - | |
| Tan08g1951 | 370 | FunFam | Phosphatase 2C family protein | 23 | 351 | - | - | |
| Tan08g1951 | 370 | Pfam | Protein phosphatase 2C | 62 | 311 | IPR001932 | - | |
| Tan08g1951 | 370 | SMART | PP2C_4 | 12 | 340 | IPR001932 | - | |
| Tan08g1951 | 370 | SUPERFAMILY | PP2C-like | 32 | 344 | IPR036457 | - | |
| Tan08g1951 | 370 | CDD | PP2Cc | 32 | 342 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan04g0368 | Tan-Chr4:3060649 | Tan08g1951 | Tan-Chr8:71647066 | 2.10E-149 | dispersed | |
| Tan04g0369 | Tan-Chr4:3060649 | Tan08g1951 | Tan-Chr8:71647066 | 9.00E-148 | dispersed | |
| Tan05g1111 | Tan-Chr5:9942096 | Tan08g1951 | Tan-Chr8:71647066 | 8.10E-144 | dispersed | |
| Tan05g1112 | Tan-Chr5:9942096 | Tan08g1951 | Tan-Chr8:71647066 | 8.10E-144 | dispersed | |
| Tan06g2773 | Tan-Chr6:79920422 | Tan08g1951 | Tan-Chr8:71647066 | 9.80E-107 | dispersed | |
| Tan08g1501 | Tan-Chr8:62350594 | Tan08g1951 | Tan-Chr8:71647066 | 3.50E-115 | dispersed | |
| Tan08g1502 | Tan-Chr8:62350594 | Tan08g1951 | Tan-Chr8:71647066 | 3.50E-115 | dispersed | |
| Tan08g1951 | Tan-Chr8:71647066 | Tan11g0034 | Tan-Chr11:639107 | 1.70E-26 | dispersed | |
| Tan08g1951 | Tan-Chr8:71647066 | Tan08g1952 | Tan-Chr8:71647066 | 4.30E-216 | tandem | |
| Tan04g0366 | Tan-Chr4:3060605 | Tan08g1951 | Tan-Chr8:71647066 | 2.10E-149 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g1951 | K01102 | - | csv:101210750 | 710.679 |