Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1964 ATGCCGAGAAAAGGAATGAGGAGTCTCCTTTTCCAGTTCTCGTCGCCGTCGAATTCCATTTCTAGGTATTCGATCTCGTCGCCGTCGAGAACTCCGGCCTTGACTCCACGGCGAAGCTTCAACGACGCTATGATTGAACAGAGCGTCGAATCTGCGGCGGCGATTGTGATGAAATGGAATCCGGATTCTTCAACTTACGCCAAAGTTACTTCCATGTTCTATGAAGATAAACGAGAAGCCATGCAGTTTATCAAGCGTGTAAATGATCTTCAGAAAGCGATGCATCTGATGGTTTCGGAAGATTCTGGTTCCGCTTCGGAAAGGCTTGTTTACGCTCAAGGATTGATGGAAATCGCCATGAAACGGCTTCAGAAGGAGTTTTATCAGATTCTCTCGATGAATCGCGCTCATCTCGATCCGGAATCTGTTTCTACTCGATCCTCTCGCTGCTCGACTAGATCGAGCACTTCCGTTGATTTCGACGAGGACGGAACCCTAGACGATGAAATTCAAGTCGTAGGGGACTCGATCTCTGAAGTTGAGCAGGTTTCTTTCACTGTCATGGAGGATTTGCGTGTTATAGCTGAGTGTATGATCTCCTCTGGCTACGCTAAAGAGTGCGTTAGTATGTATAAAGTGATTCGAAAATCGATTATCGATGAAGGTGTGTACCGACTCGGACTTGAGAAATTGAGCCCTTCGCGAATCAATAAGATGGATTGGGAGGTGCTTGATCTTAAAATCAAGAACTGGTTGGATGCACTTAAACTCGCAATTCGAACTCTGTTCGTTGGCGAACGAATTCTCTGCGACCACGTCTTTTCCTCTTCTGAATCGATTGCAGAATCCTGTTTTGCTGATATATCCAGAGAAGGCGCTTTGCTTCTGTTCGGATTTCCTGAACTTGTTGCTAAGAGTAAAAAATCGCCGGAAAAAATGTTCCGTGTTCTTGATATGTATTCATCAATCGCTGAAAATTGGCCGGAGATCGAAGTGATTTTCTCCTCTGAATCCACATCTGTAGTTCGATCTCAAGCGCTGACCTCACTCGCAAAACTCGGCGAGTTAGTCCGTGCGATTGTAATGGATCTCGAGTTGTCGATTCAGAAAAATTCATCCAAATCGCCGGTCGCTGGCGGTGGCGTTCATTCATTGACGATTCTCTCGATGGATTATCTCACTTTCCTCGCCGATTACGGCAACGTTTTGACCGATATTTTCGCCGATTGGATTCCGCCTGAGAAATCCTCTCTCGATCAAATTTTCTTCAGCAATACTTCAGAATCCGAGGACTCTGCAACGGCTTCTGCGATCTCTTTGCGAATGGGATGGCTAATTCTAGTCCTCCTCTGCAAACTCGACAGCAAAGCGAAACGCTACAAAGACGTTTCGCTGTCGTATCTATTCCTCGCTAACAATCTTCAACACATCGTCTCTAAAGTCCGATCGTCAAATCTTCAGTACCTTCTCGGCGACGAGTGGATCACGAAGCACGAGGTGAAAGTAAGGCAATTCGCCGCTAAGTACGAAGTATTGGCTTGGGGCAGAGTTTTCGATTCCTTGCCGGAGAATCCAACGGAGAGATTTTCACAGGAGGAAGCCAAGGAAATCTTCAGGAACTTCAATATGGCATTCCAAGAAACTCATCGGAAACAGAAATCCTGCTTCATTCCTGATTCGAAGCTTCGAGATGAAGTTAAATTATCAATCGGAAGAAAGCTCGTGTCGTTCTATGGAGAACTTTACAGAGCGCAGAAAGCTTACGCCGGTGGTAATGAAAAACCGTACATCAGATTCTCGCCGGAAGATATCGGTAACTACCTTTCAGATCTCTATTTTGAGCCGTCCGATTGGGCGAGCGTTTCGACCTCGTCGCCGTCGTCGACCTCCTCCTCTCATCGGCGGGAACCGGGGCCCCGTTAA 1923 46.65 MPRKGMRSLLFQFSSPSNSISRYSISSPSRTPALTPRRSFNDAMIEQSVESAAAIVMKWNPDSSTYAKVTSMFYEDKREAMQFIKRVNDLQKAMHLMVSEDSGSASERLVYAQGLMEIAMKRLQKEFYQILSMNRAHLDPESVSTRSSRCSTRSSTSVDFDEDGTLDDEIQVVGDSISEVEQVSFTVMEDLRVIAECMISSGYAKECVSMYKVIRKSIIDEGVYRLGLEKLSPSRINKMDWEVLDLKIKNWLDALKLAIRTLFVGERILCDHVFSSSESIAESCFADISREGALLLFGFPELVAKSKKSPEKMFRVLDMYSSIAENWPEIEVIFSSESTSVVRSQALTSLAKLGELVRAIVMDLELSIQKNSSKSPVAGGGVHSLTILSMDYLTFLADYGNVLTDIFADWIPPEKSSLDQIFFSNTSESEDSATASAISLRMGWLILVLLCKLDSKAKRYKDVSLSYLFLANNLQHIVSKVRSSNLQYLLGDEWITKHEVKVRQFAAKYEVLAWGRVFDSLPENPTERFSQEEAKEIFRNFNMAFQETHRKQKSCFIPDSKLRDEVKLSIGRKLVSFYGELYRAQKAYAGGNEKPYIRFSPEDIGNYLSDLYFEPSDWASVSTSSPSSTSSSHRREPGPR 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 71770631 71772844 - Tan0007123.1 Tan08g1964 761856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1964 640 Pfam Exo70 exocyst complex subunit C-terminal 249 610 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Tan08g1964 640 FunFam Exocyst subunit Exo70 family protein 66 619 - -
Tan08g1964 640 Pfam Exocyst complex component Exo70 N-terminal 49 132 - -
Tan08g1964 640 SUPERFAMILY Cullin repeat-like 75 612 IPR016159 -
Tan08g1964 640 Gene3D Exocyst complex component Exo70 56 618 - -
Tan08g1964 640 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 613 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Tan08g1964 640 MobiDBLite consensus disorder prediction 618 640 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1964 Tan-Chr8:71770631 Tan09g2370 Tan-Chr9:73415933 1.90E-78 dispersed
Tan03g1000 Tan-Chr3:66417460 Tan08g1964 Tan-Chr8:71770631 1.00E-150 wgd
Tan04g0347 Tan-Chr4:2842484 Tan08g1964 Tan-Chr8:71770631 1.20E-146 wgd
Tan05g0340 Tan-Chr5:2551565 Tan08g1964 Tan-Chr8:71770631 2.50E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1964 K07195 - csv:101208543 1105.12