Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2009 ATGGATCCACACCTTAGACGACATGCTGGTTCCATGAATGGGATTCTTTTAGGTAACGGTTCCTTTGTGGTTCAATCACAAGAGGACGCTATTGGCCGGTCTAGATTTCAGAATACCATTTTGAGTCATAACTTTCAAGAATTTAGTTGCCTTCCTCCTGATCCATCACCGAGTAACATAGCCTCAAGTTCCAGTGTTATCACCTCATCTTCTAATGATGCGAGTCATGAGGAAGATTATCTGGAGGATTGCGATTTTTCTGATGCTGTTTTGAGATTCATAAATCAGATTCTCATGGAAGAAGATATGGAAGACAAGGCTTGCATGCTTCAAGATTCTTTGGATCTTCAAGCCGCCGAGAAACCATTCTATGAGGCTCTTGGAAAAAAGTATCCTCCTTCTCCTGAACCAAATAGATCTCTGGGCAATCAATACAGTGATAGCTTCAATGAAGAACTTTGTGGAGATAGTAGTAATTACCTGAATGGTTACAATAATACTTCTTATTATGGTGAGGATAACCCTTTTGAAAGTCAGAGTGGAGATGGATTTCAAATCAGAAGCACTTTAGGTGATACCATTTCTCCATCATCTAATAGCTCCTCAAATAGTATAATTAGTGGGGCAGATGGGTGGGTGGACTTCTCGAATAATACAATTCAAGTTCCTGAGCCTAATAACAGAAGCCAATCTATTTGGCAGTTTCAAAAAGGGTTTGAAGAGGCTAGCAAATTTTTACCTGGTGGAAACAACTTGTGTCTTGATTTTGAGGTAAATGGGTCAGCAACTCGGGGTTCGGACGAGGGAACGAGCCAGATATATGTGAAGGCAGCAAGAAAGGATCAGAGGAATATTTTGTCGCTTGAGTCACGAGTAAGAAAGAATCTGCATGATGAGGATGGAGATTTGGAAGAAGAGAGAAGCAGCAAGCAAGCAGCTGTATTTACAGAGTCGACTTTGCGGTCTAAGATGTTTGATATTGTGTTGCTTTGTAGTGCAGGGGAGGGGCATGATCGGTTAGTTTCATTTCGACAGGAATTACAGAACGCTAAAATCAAGAGCATGGTGCAGACTGGGCAACTAAAAGAGTCTAGTGGTGGGAGGGGTCGTCGGAAGAAGCAAAGTGGGAAAAAGGAGGTTGTGGATTTGAGAACTCTTCTAATTAGCTGTGCTCAAGCTGTTGCAGCTGATGACCATAGGAATGCCAGTGAACTTCTAAAGCAGGTGAGGCAACATGCTTCTCCTTTTGGCGATGGAAATCAGAGACTGGCCAGTTGTTTTGCTGATGGTCTTGAGGCGCGCTTGGCAGGTACTGGTAGCCAGATTTACAAAGGTCTAATTAATAAAAGAACGTCTGCTGCTGATGTATTGAAAGCCTACCACCTGTATCTTGCTGCATGCCCATTTAGGAAGATCTCTAATTTTACTTCAAACAGGACTACCATGATTGCTGCTGAGAATGCAACTAAGCTTCACGTCATAGATTTTGGTATTCTGTACGGTTTCCAGTGGCCTACTTTAATCCAGAGACTGTCGTGGAGAAAAGGAGGACCCCCAAAGCTTCGAATTACTGGAATAGAATTTCCCCAGCCTGGCTTCCGTCCAGCAGAGAGAGTTGACGAGACAGGCCGTCGCTTGGCGGCCTATGCAGAGAGTTTTAACGTCCCATTTGAGTATAATGCTATAGCAAAAAAGTGGGAAACTATTACAGTCGAAGAACTCGATATCAATGAGGATGAGTTCCTTGTTGTTAATTGTTTGTATCGAGCTAAAAATCTGCTTGAGGAGAGTGTTGCTACGGAGAGTGCTAGAAATGCTGTTCTTAGATTGATACGCAAAATGAATCCTAACTTATTCATCAGTGGCATTGTCAATGGGGCATACAATGCTCCTTTCTTTGTTACCCGATTTCGAGAGGCTTTGTTTCACTTTTCAGCTATCTTTGATATGCTTGAAACTGTTGTACCTCGTGAGGATTGGGAGAGAATGCTATTGGAGAGGGAGATCTTTGGCAGGGAGGCTTTAAATGTTATAGCATGTGAGGGATGGGAGAGAGTGGAAAGACCAGAAACATACAAGCAATGGCAATTCCGGATCATGAGGGCTGGATTTGAGCAACTGCCTTTTCATCGTGAGATTTTTGAGAGAGCAGTTGAAAAGGTGCGGTCAAGTTACCACAGAGATTTTTTGATTGATGAAGATAGTAGATGGATACTTCAGGGATGGAAAGGTCGAATTATATATGCCATCTCTGCATGGAAACCTACTAAAGAGTAA 2277 42.56 MDPHLRRHAGSMNGILLGNGSFVVQSQEDAIGRSRFQNTILSHNFQEFSCLPPDPSPSNIASSSSVITSSSNDASHEEDYLEDCDFSDAVLRFINQILMEEDMEDKACMLQDSLDLQAAEKPFYEALGKKYPPSPEPNRSLGNQYSDSFNEELCGDSSNYLNGYNNTSYYGEDNPFESQSGDGFQIRSTLGDTISPSSNSSSNSIISGADGWVDFSNNTIQVPEPNNRSQSIWQFQKGFEEASKFLPGGNNLCLDFEVNGSATRGSDEGTSQIYVKAARKDQRNILSLESRVRKNLHDEDGDLEEERSSKQAAVFTESTLRSKMFDIVLLCSAGEGHDRLVSFRQELQNAKIKSMVQTGQLKESSGGRGRRKKQSGKKEVVDLRTLLISCAQAVAADDHRNASELLKQVRQHASPFGDGNQRLASCFADGLEARLAGTGSQIYKGLINKRTSAADVLKAYHLYLAACPFRKISNFTSNRTTMIAAENATKLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGFRPAERVDETGRRLAAYAESFNVPFEYNAIAKKWETITVEELDINEDEFLVVNCLYRAKNLLEESVATESARNAVLRLIRKMNPNLFISGIVNGAYNAPFFVTRFREALFHFSAIFDMLETVVPREDWERMLLEREIFGREALNVIACEGWERVERPETYKQWQFRIMRAGFEQLPFHREIFERAVEKVRSSYHRDFLIDEDSRWILQGWKGRIIYAISAWKPTKE 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 72165090 72168492 + Tan0019467.1 Tan08g2009 761901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2009 758 Pfam GRAS domain family 383 754 IPR005202 -
Tan08g2009 758 ProSiteProfiles GRAS family profile. 374 754 IPR005202 -
Tan08g2009 758 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 360 753 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Tan08g2009 758 MobiDBLite consensus disorder prediction 52 74 - -
Tan08g2009 758 MobiDBLite consensus disorder prediction 354 377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0414 Tan-Chr5:2914749 Tan08g2009 Tan-Chr8:72165090 1.80E-163 dispersed
Tan08g2009 Tan-Chr8:72165090 Tan11g1747 Tan-Chr11:17753713 4.60E-47 dispersed
Tan01g0990 Tan-Chr1:9625374 Tan08g2009 Tan-Chr8:72165090 2.30E-38 transposed
Tan01g1312 Tan-Chr1:12907859 Tan08g2009 Tan-Chr8:72165090 2.80E-41 transposed
Tan01g1808 Tan-Chr1:19362918 Tan08g2009 Tan-Chr8:72165090 2.70E-57 transposed
Tan01g1912 Tan-Chr1:20519862 Tan08g2009 Tan-Chr8:72165090 3.00E-42 transposed
Tan01g1930 Tan-Chr1:20994328 Tan08g2009 Tan-Chr8:72165090 1.10E-31 transposed
Tan03g1333 Tan-Chr3:69835733 Tan08g2009 Tan-Chr8:72165090 3.10E-15 transposed
Tan03g1972 Tan-Chr3:74808985 Tan08g2009 Tan-Chr8:72165090 2.30E-44 transposed
Tan03g2236 Tan-Chr3:76725456 Tan08g2009 Tan-Chr8:72165090 4.50E-52 transposed
Tan09g1343 Tan-Chr9:65722886 Tan08g2009 Tan-Chr8:72165090 3.00E-45 transposed
Tan11g1400 Tan-Chr11:12468463 Tan08g2009 Tan-Chr8:72165090 8.90E-46 transposed
Tan01g2424 Tan-Chr1:30166427 Tan08g2009 Tan-Chr8:72165090 4.70E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28234 PF03514 GRAS 3.80E-116 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2009 K27753 - csv:101205887 1273.46