Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2022 ATGGCCCAACTCTGTTTTCTCTGTTTCTTCTTCCTCGTCTTCGCTGGCCCCGCCGCATCTCAGCAGCTCTACTTCGCCGGATTCCACGACGCCGCCGCCGCCGCCGCCAACTTAACCCTCACAGACATCGCAAAGATCGAGCCGAACGGAATCTTGAAGCTCACAAACGACACCAGTCGATTACAGGGCCATGCCTTTTACACTTCCCCTGTTCGCTTCAAAAACTCCTCCGACGGCAAAGCTTTTTCGTTCTCCACCGCTTTTGCCATCGCTGTCGTCCCCGAGTACCCGACCCTCGGCGGCCATGGCCTCGCCTTCACCATTGCACCCTCCAGAACCCTACGTGGACTTCCCAGTCAGTATTTAGGCCTTCTCAATGCCACCGATGTCGGGAACTTCTCGAACCACCTCTTCGCCGTCGAGTTCGACACCGTTCAAGATTTCGAGTTCGGCGACATCAACGACAACCACGTCGGAATCAATCTCAACAATATGGTCTCTAATGCCTCTACCACCGCTTCCTATTTCGTCGACGACGGACCCACAAAGCAAAACCTAACACTAAAAAGTGGGAAGCCGGTTCAAGCTTGGATCGATTACGATTCCTCTGTAAATACCATCACGGTGGCGCTTTCTCCGTTTTCCACCAAACCCAAGAAGCCGATTCTCTCGTTTAATGTAGATCTCTCCCCGATTCTTCACGAGTTTATGTACGTTGGGTTTTCGGCCTCGACGGGGCTTCTTGCGAGTTCTCACTATGTGTTGGGATGGAGTTTCAGTATGAACGGACCGGCCCAGTCTCTGGATCTTTCTTCTCTGCCGTCTGTTCCAGGTCCGAAGAAGAAGCACACTGGTTTCACAATTGGGGTTTCGGTTGCGGCTGTTCTGATTGTGGTAATTGCGATTTGTGTTGCTGCTTTCATCATTTGGAAGATAAAAAACGCGGACATAATCGAAGCCTGGGAGCTTGAAATCGGCCCCCATCGGTACTCTTACAAGGAGCTCAAGCAAGCGACGAAGCGATTTAGGGATAAAGAGCTTCTGGGGCGCGGTGGATTTGGGAAGGTTTATAAAGGGACTTTGCCGAATTCGAAAACCCAAGTAGCTGTCAAGCGAATTTCTCACGAATCGAAACAGGGTTTGAGGGAATTTGTGTCAGAAATCGCTAGCATTGGCCGGCTCCGTCACCGGAACTTGGTTCAGTTACTGGGATGGTGTCGCCGCCGTGGGGATCTGCTTCTTGTTTATGATTTTATGGCTAATGGAAGCTTGGATAACTACATTTTCGACGAGCCGGATGTGATTTTGAGTTGGGATCAGAGGTTTCGGATCATTAAGGGCGTCGCCTCCGGTTTGCTGTACTTGCACGAAGGCTACGAACAGGTGGTCATTCATAGAGATGTAAAGGCCAGTAATGTTCTGCTCGACAGCGAAATGAACGGGAAGTTGGGTGATTTCGGTCTTGCTCGGCTATACGAACACGGGGCGAATCCGAGCACGACTCGAGTCGTCGGAACACTGGGATATCTGGCGCCGGAGCTACCCAGAACAGGGAAATCCACGACAAGCTCAGATGTATATGCCTTCGGCGCACTTCTGCTGGAAGTGGCCTGCGGGCGGCGGCCGATCGATCCGAAAGCATCGTCGGAGGAGCTGGTGTTGGTGGATTGGGTGTGGGAGAAGTACAGGGAAGGGAAATTGCTGGAAGTAATGGATCCAAAATTGAAAGGGGATTTCAATGTGGTTGAGGCAGAGATGATTCTGAAATTGGGGTTGTTCTGTTCGAACGATTCGGCGGCGGCGCGGCCGAGTATGAGGCAGGTGGTGCGATTTTTAGAGGGAGAAATTGGAGTTCCGGAGGAGATATCGGCGCCGAAAGTGGTGGAAGGAGGGAAGAACGGCGAAGGGTTCGATGATTTTGTGAATTCGTTTGCTTCTTCTTCGTTTAACAAGTTTAGCACGAATTCATCGACTGGAAATAGGGATATGGATATGAGTTTTGCTTCGTTTTCCACTTCTCCTCTTTCGCTTCTCAATGGCAGAGACTGA 2049 51.2 MAQLCFLCFFFLVFAGPAASQQLYFAGFHDAAAAAANLTLTDIAKIEPNGILKLTNDTSRLQGHAFYTSPVRFKNSSDGKAFSFSTAFAIAVVPEYPTLGGHGLAFTIAPSRTLRGLPSQYLGLLNATDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGINLNNMVSNASTTASYFVDDGPTKQNLTLKSGKPVQAWIDYDSSVNTITVALSPFSTKPKKPILSFNVDLSPILHEFMYVGFSASTGLLASSHYVLGWSFSMNGPAQSLDLSSLPSVPGPKKKHTGFTIGVSVAAVLIVVIAICVAAFIIWKIKNADIIEAWELEIGPHRYSYKELKQATKRFRDKELLGRGGFGKVYKGTLPNSKTQVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDNYIFDEPDVILSWDQRFRIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSEMNGKLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKSTTSSDVYAFGALLLEVACGRRPIDPKASSEELVLVDWVWEKYREGKLLEVMDPKLKGDFNVVEAEMILKLGLFCSNDSAAARPSMRQVVRFLEGEIGVPEEISAPKVVEGGKNGEGFDDFVNSFASSSFNKFSTNSSTGNRDMDMSFASFSTSPLSLLNGRD 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 72301086 72303664 - Tan0005166.1 Tan08g2022 761914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2022 682 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Tan08g2022 682 SMART serkin_6 342 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2022 682 Gene3D - 22 271 - -
Tan08g2022 682 FunFam L-type lectin-domain containing receptor kinase S.4 19 267 - -
Tan08g2022 682 PANTHER - 39 633 IPR050528 GO:0005886(PANTHER)
Tan08g2022 682 FunFam L-type lectin-domain containing receptor kinase S.4 419 625 - -
Tan08g2022 682 Gene3D Transferase(Phosphotransferase) domain 1 419 627 - -
Tan08g2022 682 ProSiteProfiles Protein kinase domain profile. 342 616 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2022 682 SUPERFAMILY Protein kinase-like (PK-like) 324 626 IPR011009 -
Tan08g2022 682 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524(InterPro)
Tan08g2022 682 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246(InterPro)
Tan08g2022 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 281 IPR013320 -
Tan08g2022 682 Pfam Legume lectin domain 22 273 IPR001220 GO:0030246(InterPro)
Tan08g2022 682 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Tan08g2022 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2022 682 Pfam Protein kinase domain 343 550 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2022 682 CDD STKc_IRAK 348 614 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0928 Tan-Chr3:65681862 Tan08g2022 Tan-Chr8:72301086 6.10E-221 dispersed
Tan05g1465 Tan-Chr5:25986400 Tan08g2022 Tan-Chr8:72301086 5.50E-105 dispersed
Tan06g2309 Tan-Chr6:74247288 Tan08g2022 Tan-Chr8:72301086 2.60E-67 dispersed
Tan08g2022 Tan-Chr8:72301086 Tan08g2180 Tan-Chr8:73530101 3.50E-155 dispersed
Tan08g2021 Tan-Chr8:72294741 Tan08g2022 Tan-Chr8:72301086 1.70E-194 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67969 PF00069 Pkinase 5.30E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2022 - - - 0.0