Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2046 ATGGGTGACGGTATTGAATCGTTCGATCATGTCCCTCAACAGAGCCGCCGCGACAAGCTCCGGGAACAACCGGACCGGTCGTCTTTCCTCCCTTTTTACGACCCACCTTCTTTAATCTCCCCCTCCGATATTCTGAGCACCGCCGCCAATAATCCCCTTTTCTCCACCGGCCCTCGTTTCCAATTCCACCACCCTTTTTTCGACCCTCAAATCCAATCCTCTCTCTTACCCGATTCCATTTCAAACAACAACTCTCTACTCTTAAACCATTGCTACCCAGACGCCCCCTTCAAGCCGGAGCCACTCTCTCTATCTCTCTCCTCTCAGCCCTATCTCAGTGGCTCCGCCGTCGGTAATCTTAATATTGGTAAAACAGCTTTGGTTTTCCCTCTCGGCCCTTTTACTGGCTACGCTTCCATTTTGAAAGGGTCGAGGTTTTTGAAGCCAGCCCAGCAGTTGTTGGAAGATCTTTGTGATGTTGTTGGTCTTCAAGGGATTCAATCTTCTTCTTCTTCTTCTTCTTCTCTTAAAACTCCTTCTGATTCTGGTTTTGTTGATATTCCAACTTCTGATTCTTTGAGTGATTCTGGTATTCTTGATCATTCCCTTGCTTCTTCTGCCGATGTTCCTCCTGCTAATAAATCTACCCTTCTTTCTATGCTTGATGAGGTTTACAGAAAATATAAGCAATACTATCAACAGATTCAGGAAGTAATGACGTCGTTCGAGTACATCTCTGGGCTCGGGAACGCGGCGCCCTATGCAAACCAGGCTATAAAAGCCATGTACAAGCATTTCAAGTGCTTGAAAAATGCAATTCTAGACCAACTTCAATTCAATAAAAAGACTCATGGTGACTACTGTCAAAGATCTGTTCAGAACCCGGGATTTCTTGAGCATCAGCCTGTTTGGCGACCACAACGAGGGCTACCCGAACGAGCAGTGACGGTTCTCCGTGCTTGGTTGTTTGAACATTTTTTGCATCCTTATCCTTCTGATACAGACAAGCTTATGTTGGCAAAACAGACTGGTCTGTCTCGTAGTCAGGTATCTAACTGGTTCATTAATGCAAGAGTGAGGCTTTGGAAGCCAATGGTTGAAGAAATATACATGCTCGAAACAAAGCAAACACAGAAGAATTTGCATAGAGAAGATCGAAACGCCATCAGGGCGAACGATCATCATCCATCGAACTCGCTCGCAACGGATAACCCGTCTACATCCACTCAACAAATTCAAGACACTCCTCCCAAACGCACCCGAAACGAGCATCACGACATGCCAATGGGAAATCAAGATGAACCCTTGAACGTATCTTACAGCTTGTCGAGCCATCCCCATGTTGGTGCAAACACAAACATGGCAGGCAACAACACCAGCGGAGTTTCCTTAACTCTAGGACTTCACCAGAACAATGGCATCGGTGGCTTTTCGGAACCCTTCCCTGTTGGGTTCCCGGTTGCTGCCACTCGACGTTTCGGGCTTGGAATCCAAGCGAATAGCGACGGGTACGTAATGGGTGGACATTTTGGTAGAGATGTTCTTGGAAGTCAGCTGTTACATGACTTTGTAGGGTGA 1578 46.64 MGDGIESFDHVPQQSRRDKLREQPDRSSFLPFYDPPSLISPSDILSTAANNPLFSTGPRFQFHHPFFDPQIQSSLLPDSISNNNSLLLNHCYPDAPFKPEPLSLSLSSQPYLSGSAVGNLNIGKTALVFPLGPFTGYASILKGSRFLKPAQQLLEDLCDVVGLQGIQSSSSSSSSLKTPSDSGFVDIPTSDSLSDSGILDHSLASSADVPPANKSTLLSMLDEVYRKYKQYYQQIQEVMTSFEYISGLGNAAPYANQAIKAMYKHFKCLKNAILDQLQFNKKTHGDYCQRSVQNPGFLEHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPSDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIYMLETKQTQKNLHREDRNAIRANDHHPSNSLATDNPSTSTQQIQDTPPKRTRNEHHDMPMGNQDEPLNVSYSLSSHPHVGANTNMAGNNTSGVSLTLGLHQNNGIGGFSEPFPVGFPVAATRRFGLGIQANSDGYVMGGHFGRDVLGSQLLHDFVG 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 72568008 72572061 - Tan0003105.1 Tan08g2046 761938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2046 525 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 90 406 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Tan08g2046 525 MobiDBLite consensus disorder prediction 1 26 - -
Tan08g2046 525 Gene3D - 307 369 - -
Tan08g2046 525 SUPERFAMILY Homeodomain-like 306 371 IPR009057 -
Tan08g2046 525 Pfam Associated with HOX 140 273 IPR006563 -
Tan08g2046 525 SMART HOX_1 304 368 IPR001356 GO:0003677(InterPro)
Tan08g2046 525 CDD homeodomain 304 365 IPR001356 GO:0003677(InterPro)
Tan08g2046 525 SMART prehox3 135 275 IPR006563 -
Tan08g2046 525 MobiDBLite consensus disorder prediction 389 436 - -
Tan08g2046 525 ProSiteProfiles 'Homeobox' domain profile. 301 364 IPR001356 GO:0003677(InterPro)
Tan08g2046 525 Pfam Homeobox KN domain 321 360 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan08g2046 525 MobiDBLite consensus disorder prediction 393 416 - -
Tan08g2046 525 MobiDBLite consensus disorder prediction 10 25 - -
Tan08g2046 525 FunFam BEL1-like homeodomain protein 9 307 369 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2687 Tan-Chr1:45138694 Tan08g2046 Tan-Chr8:72568008 7.60E-67 dispersed
Tan01g2688 Tan-Chr1:45138694 Tan08g2046 Tan-Chr8:72568008 3.80E-42 dispersed
Tan08g1623 Tan-Chr8:65871483 Tan08g2046 Tan-Chr8:72568008 1.60E-49 dispersed
Tan08g1624 Tan-Chr8:65871483 Tan08g2046 Tan-Chr8:72568008 1.60E-49 dispersed
Tan03g0894 Tan-Chr3:65173577 Tan08g2046 Tan-Chr8:72568008 1.20E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28235 PF07526 POX 9.70E-34 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2046 - - - 0.0