Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g2046 | ATGGGTGACGGTATTGAATCGTTCGATCATGTCCCTCAACAGAGCCGCCGCGACAAGCTCCGGGAACAACCGGACCGGTCGTCTTTCCTCCCTTTTTACGACCCACCTTCTTTAATCTCCCCCTCCGATATTCTGAGCACCGCCGCCAATAATCCCCTTTTCTCCACCGGCCCTCGTTTCCAATTCCACCACCCTTTTTTCGACCCTCAAATCCAATCCTCTCTCTTACCCGATTCCATTTCAAACAACAACTCTCTACTCTTAAACCATTGCTACCCAGACGCCCCCTTCAAGCCGGAGCCACTCTCTCTATCTCTCTCCTCTCAGCCCTATCTCAGTGGCTCCGCCGTCGGTAATCTTAATATTGGTAAAACAGCTTTGGTTTTCCCTCTCGGCCCTTTTACTGGCTACGCTTCCATTTTGAAAGGGTCGAGGTTTTTGAAGCCAGCCCAGCAGTTGTTGGAAGATCTTTGTGATGTTGTTGGTCTTCAAGGGATTCAATCTTCTTCTTCTTCTTCTTCTTCTCTTAAAACTCCTTCTGATTCTGGTTTTGTTGATATTCCAACTTCTGATTCTTTGAGTGATTCTGGTATTCTTGATCATTCCCTTGCTTCTTCTGCCGATGTTCCTCCTGCTAATAAATCTACCCTTCTTTCTATGCTTGATGAGGTTTACAGAAAATATAAGCAATACTATCAACAGATTCAGGAAGTAATGACGTCGTTCGAGTACATCTCTGGGCTCGGGAACGCGGCGCCCTATGCAAACCAGGCTATAAAAGCCATGTACAAGCATTTCAAGTGCTTGAAAAATGCAATTCTAGACCAACTTCAATTCAATAAAAAGACTCATGGTGACTACTGTCAAAGATCTGTTCAGAACCCGGGATTTCTTGAGCATCAGCCTGTTTGGCGACCACAACGAGGGCTACCCGAACGAGCAGTGACGGTTCTCCGTGCTTGGTTGTTTGAACATTTTTTGCATCCTTATCCTTCTGATACAGACAAGCTTATGTTGGCAAAACAGACTGGTCTGTCTCGTAGTCAGGTATCTAACTGGTTCATTAATGCAAGAGTGAGGCTTTGGAAGCCAATGGTTGAAGAAATATACATGCTCGAAACAAAGCAAACACAGAAGAATTTGCATAGAGAAGATCGAAACGCCATCAGGGCGAACGATCATCATCCATCGAACTCGCTCGCAACGGATAACCCGTCTACATCCACTCAACAAATTCAAGACACTCCTCCCAAACGCACCCGAAACGAGCATCACGACATGCCAATGGGAAATCAAGATGAACCCTTGAACGTATCTTACAGCTTGTCGAGCCATCCCCATGTTGGTGCAAACACAAACATGGCAGGCAACAACACCAGCGGAGTTTCCTTAACTCTAGGACTTCACCAGAACAATGGCATCGGTGGCTTTTCGGAACCCTTCCCTGTTGGGTTCCCGGTTGCTGCCACTCGACGTTTCGGGCTTGGAATCCAAGCGAATAGCGACGGGTACGTAATGGGTGGACATTTTGGTAGAGATGTTCTTGGAAGTCAGCTGTTACATGACTTTGTAGGGTGA | 1578 | 46.64 | MGDGIESFDHVPQQSRRDKLREQPDRSSFLPFYDPPSLISPSDILSTAANNPLFSTGPRFQFHHPFFDPQIQSSLLPDSISNNNSLLLNHCYPDAPFKPEPLSLSLSSQPYLSGSAVGNLNIGKTALVFPLGPFTGYASILKGSRFLKPAQQLLEDLCDVVGLQGIQSSSSSSSSLKTPSDSGFVDIPTSDSLSDSGILDHSLASSADVPPANKSTLLSMLDEVYRKYKQYYQQIQEVMTSFEYISGLGNAAPYANQAIKAMYKHFKCLKNAILDQLQFNKKTHGDYCQRSVQNPGFLEHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPSDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIYMLETKQTQKNLHREDRNAIRANDHHPSNSLATDNPSTSTQQIQDTPPKRTRNEHHDMPMGNQDEPLNVSYSLSSHPHVGANTNMAGNNTSGVSLTLGLHQNNGIGGFSEPFPVGFPVAATRRFGLGIQANSDGYVMGGHFGRDVLGSQLLHDFVG | 525 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 72568008 | 72572061 | - | Tan0003105.1 | Tan08g2046 | 761938 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g2046 | 525 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 90 | 406 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Tan08g2046 | 525 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Tan08g2046 | 525 | Gene3D | - | 307 | 369 | - | - | |
Tan08g2046 | 525 | SUPERFAMILY | Homeodomain-like | 306 | 371 | IPR009057 | - | |
Tan08g2046 | 525 | Pfam | Associated with HOX | 140 | 273 | IPR006563 | - | |
Tan08g2046 | 525 | SMART | HOX_1 | 304 | 368 | IPR001356 | GO:0003677(InterPro) | |
Tan08g2046 | 525 | CDD | homeodomain | 304 | 365 | IPR001356 | GO:0003677(InterPro) | |
Tan08g2046 | 525 | SMART | prehox3 | 135 | 275 | IPR006563 | - | |
Tan08g2046 | 525 | MobiDBLite | consensus disorder prediction | 389 | 436 | - | - | |
Tan08g2046 | 525 | ProSiteProfiles | 'Homeobox' domain profile. | 301 | 364 | IPR001356 | GO:0003677(InterPro) | |
Tan08g2046 | 525 | Pfam | Homeobox KN domain | 321 | 360 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Tan08g2046 | 525 | MobiDBLite | consensus disorder prediction | 393 | 416 | - | - | |
Tan08g2046 | 525 | MobiDBLite | consensus disorder prediction | 10 | 25 | - | - | |
Tan08g2046 | 525 | FunFam | BEL1-like homeodomain protein 9 | 307 | 369 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2687 | Tan-Chr1:45138694 | Tan08g2046 | Tan-Chr8:72568008 | 7.60E-67 | dispersed | |
Tan01g2688 | Tan-Chr1:45138694 | Tan08g2046 | Tan-Chr8:72568008 | 3.80E-42 | dispersed | |
Tan08g1623 | Tan-Chr8:65871483 | Tan08g2046 | Tan-Chr8:72568008 | 1.60E-49 | dispersed | |
Tan08g1624 | Tan-Chr8:65871483 | Tan08g2046 | Tan-Chr8:72568008 | 1.60E-49 | dispersed | |
Tan03g0894 | Tan-Chr3:65173577 | Tan08g2046 | Tan-Chr8:72568008 | 1.20E-96 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28235 | PF07526 | POX | 9.70E-34 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g2046 | - | - | - | 0.0 |