Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2106 ATGCACAGTTGCTGCGATGCCAAGAGAATTCTTTACACTTTTCTATGTAATATCTTTCTGATATTCATGAGCTTGGCTTTCAGGAATGCACCCACTTTTGGAAACGAATCAGATCATTTGGCTCTACTTGACTTGAAAAGTAGAGTAGTCAATGACCCACTCAAAATCATGAGTTCTTGGAACAATTCCATGCATTTTTGTGACTGGATTGGTGTTACTTGCAATACCACCATTAGCAGAGTAGTGGCTCTGGAATTGGAAGCTCGAAAATTGACTGGTTCGATACCACCTTCTCTGGGAAATCTTACTTATCTCACTAAAATCAACTTGGGAGACAACAATTTCCATGGTCGGATTCCTCAAGAGTTTGGTCGGCTACTACAATTGCGTCACCTTAATTTGTCCTTCAATAACTTGGGAGGTGAGATTCCGACGAATTTAAGTTATTGTACTGATCTTGTTCTTTTGGCAATTAGTATCAATAGACTGATTGGGCAGATTCCACACCAGTTCTTCAAATTAACCAAGTTGAATCAACTTCGTCTTGGTGGTAACAACCTGACTGGAACCATCCCATCTTGGATAGGGAATTTTTCTTCCATATTTGCTATAACATTTGCACAAAATAATTTTCAAGGAAACATTCCTAGTGAGCTAGGGCGCTTATCTAGGTTGGATTTCTTCACTGTTTATGGGAACTATTTGACAGGAACAGTCCCGCTTTCAATCTATAATCTATCATCTCTTACTTACTTTTCTCTTGCTCAAAATCGACTCCAAGGAACTCTACCACCAAATGTCGGATTTACTCTCCCCAATCTTCGGGTTTTTGCTGGTGGTGTCAATGATTTTGAAGGACCTATTCCGACATCCTTGGTTAATATCTCCGGTCTTCAGGTCTTAGATTTTGCTGAGAACAGGCTCATTGGAACACTACCTCATGACTTTGGGAGCTTAAAAGACTTGGTGAGACTCAACTTTGATGACAACAGACTGGGAAGTGGACAAGTTGGTGACTTAAATTTAATCAGGTCCCTAGCTAATTGTACTAGTCTAAGCGTTTTGGGTCTTGCTGGAAATCGCTTTGGAGGAGCATTGCCTCCATCTATAAGCAACCTTTCACACCAGCTGACAATTCTAACCTTGGGTACGAATTTGTTGAGTGGAAGCATTCCTGTAGGGATTGAAAACCTGATTAACTTACAAGTTCTTGGAGTGGAAGGTAACTACATGAGTGGTAGTGTTCCTCCCAATATTGGAAAGCTTCAGAATTTGGCTATTCTTGAATTGAATGGTAATAGGTTAACTGGGCCAATTCCATCCTCCATTGGTAACTTATCTTCAGTGACCAAGCTCTTAATGGAGAATAATCAACTTCAGGGAAGTATACCTCCAAGCTTAGGACAATGCAAAAGCCTTCAAGTTCTTGACCTATCTGGTAACAACCTAAGTGGCACCATACCCAAGGAAGTTCTTAGCCTCTCTTCCCTTTCAATCTATTTGGCCTTGAATCACAACTCACTTACTGGTCCATTGCCAAATGAAGTGGGTGAGTTAGTGAGTTTAACATTGTTGGATGTATCACAAAACAAATTATCAGGTGATATTCCTAGCAACCTTGGTAAATGCATTAGCTTGGAACGCTTGTATTTGGGAGGTAACCAATTTGAGGGAACAATTTCTGAATCTTTAAAAGCTTTAAAAGGCCTAGAAGAACTCAATCTCTCAAGTAACAACTTGTCTGGACCAATTCCTCAATTTCTTAGCAAGCTTTTTTCACTCAAGTTTCTTAATCTATCCTATAATAATTTTGAGGGAAAAGTGCCCAAAGAAGGCATTTTTTCCAATTCAACCATGTTTTCCATCCTTGGAAACAATAATCTTTGTGATGGTTTGCAAGAATTACATTTACCTTCGTGCACATCTAAAGCAACACATTCATCCAACAAGCTTCTAACACCGAAAGTGTTAATCCCTATAGCATCTACCCTCACATTCCTAGTTATTCTTTTGAGCATCCTATCTGTACGGTTTACCATGAAGAAGTCAAGGAAAAATGTTTTATCTTCATCTTCCTCCACAGATTTACTATCACAAATTTCTTACTTAGAGCTCAATAAAGCAACGAATGGGTTCTCAGTGGACAATTTGATTGGTTCAGGCAGTTTTGGTTCTGTGTATAAAGGTATTCTTTTGAATAGTGGATCAACTGTTGCCGTTAAGGTTCTTAACCTTCAACAACGTGGTGCTTCCAAGAGTTTTGTTGATGAATGCAAAGCTCTCACAAGCATACGACATCGGAATCTCCTCAAGATCATAACTTCTTGCTCAAGTACAGATGAAGAAGGTAGTGAATTCAAAGCTCTAGTCTTTGAATTCATGTCCAATGGAAACCTAGATTGTTGGCTTCACCCTACACATCTTGGAGAGAATCAAAGAAGATTGAGCCTTATTCAGAGATTGAACATTGTTATTGATATTGCCAATGCATTAGATTATCTCCATAATCATTGTGAAACACCCGTTGTTCATTGTGATCTAAAGCCTAGCAATGTGTTGCTTGACGATGATATGGTAGGCCATGTCGGAGACTTTGGGTTAGCCAGATTCATTCTTGAAGGATCAAATCAATCCTCTTTCAGACAAACCATGTCACTTGCGCTCAAGGGTTCTATTGGATATATTCCTCCAGAGTACGGAATTGGTGGCAGAATTTCCATTGAAGGAGATATCTTTAGCTATGGAATTCTACTATTGGAGATGTTCATTGGAAAAAGACCCACTGATAACATGTTTGGTGATGGTGTGGATATTCGTCTATTCACTGAAATGGCGTTACCTCATGGTATCTTCGACATAGTCGATCCTTGTTTACTATCTAAAGAGACATGCCAACAAGAAGAAGAGAATGAAGAAAAACTACATGAAATAGCAATAATGGGTGAGAAAGATCATAGAGAAATCGAGCAAAGAAGAAGAATGGAAGAATGCCTAGTCTCAGTAACGAGAATTGGCCTATCGTGCTCCTCAACAACACCTGGAGAAAGGATGTCCATGAATGTCGTCGTTAACAAGTTGCAAACAATTAAAAGCTCATATCTCAAGTAG 3108 39.25 MHSCCDAKRILYTFLCNIFLIFMSLAFRNAPTFGNESDHLALLDLKSRVVNDPLKIMSSWNNSMHFCDWIGVTCNTTISRVVALELEARKLTGSIPPSLGNLTYLTKINLGDNNFHGRIPQEFGRLLQLRHLNLSFNNLGGEIPTNLSYCTDLVLLAISINRLIGQIPHQFFKLTKLNQLRLGGNNLTGTIPSWIGNFSSIFAITFAQNNFQGNIPSELGRLSRLDFFTVYGNYLTGTVPLSIYNLSSLTYFSLAQNRLQGTLPPNVGFTLPNLRVFAGGVNDFEGPIPTSLVNISGLQVLDFAENRLIGTLPHDFGSLKDLVRLNFDDNRLGSGQVGDLNLIRSLANCTSLSVLGLAGNRFGGALPPSISNLSHQLTILTLGTNLLSGSIPVGIENLINLQVLGVEGNYMSGSVPPNIGKLQNLAILELNGNRLTGPIPSSIGNLSSVTKLLMENNQLQGSIPPSLGQCKSLQVLDLSGNNLSGTIPKEVLSLSSLSIYLALNHNSLTGPLPNEVGELVSLTLLDVSQNKLSGDIPSNLGKCISLERLYLGGNQFEGTISESLKALKGLEELNLSSNNLSGPIPQFLSKLFSLKFLNLSYNNFEGKVPKEGIFSNSTMFSILGNNNLCDGLQELHLPSCTSKATHSSNKLLTPKVLIPIASTLTFLVILLSILSVRFTMKKSRKNVLSSSSSTDLLSQISYLELNKATNGFSVDNLIGSGSFGSVYKGILLNSGSTVAVKVLNLQQRGASKSFVDECKALTSIRHRNLLKIITSCSSTDEEGSEFKALVFEFMSNGNLDCWLHPTHLGENQRRLSLIQRLNIVIDIANALDYLHNHCETPVVHCDLKPSNVLLDDDMVGHVGDFGLARFILEGSNQSSFRQTMSLALKGSIGYIPPEYGIGGRISIEGDIFSYGILLLEMFIGKRPTDNMFGDGVDIRLFTEMALPHGIFDIVDPCLLSKETCQQEEENEEKLHEIAIMGEKDHREIEQRRRMEECLVSVTRIGLSCSSTTPGERMSMNVVVNKLQTIKSSYLK 1035
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 73032044 73035570 + Tan0011131.1 Tan08g2106 761998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2106 1035 Gene3D Transferase(Phosphotransferase) domain 1 794 1034 - -
Tan08g2106 1035 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524(InterPro)
Tan08g2106 1035 SUPERFAMILY Protein kinase-like (PK-like) 684 1026 IPR011009 -
Tan08g2106 1035 FunFam Leucine-rich repeat receptor-like protein kinase TDR 71 342 - -
Tan08g2106 1035 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Tan08g2106 1035 ProSiteProfiles Leucine-rich repeat profile. 472 493 IPR001611 GO:0005515(InterPro)
Tan08g2106 1035 Gene3D Ribonuclease Inhibitor 339 649 IPR032675 -
Tan08g2106 1035 Pfam Leucine Rich Repeat 298 319 IPR001611 GO:0005515(InterPro)
Tan08g2106 1035 Pfam Leucine Rich Repeat 128 150 IPR001611 GO:0005515(InterPro)
Tan08g2106 1035 Pfam Leucine Rich Repeat 176 198 IPR001611 GO:0005515(InterPro)
Tan08g2106 1035 Pfam Leucine Rich Repeat 351 373 IPR001611 GO:0005515(InterPro)
Tan08g2106 1035 Pfam Leucine Rich Repeat 521 543 IPR001611 GO:0005515(InterPro)
Tan08g2106 1035 Pfam Leucine Rich Repeat 105 126 IPR001611 GO:0005515(InterPro)
Tan08g2106 1035 Pfam Protein kinase domain 713 931 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2106 1035 ProSiteProfiles Protein kinase domain profile. 712 1034 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2106 1035 PANTHER OS04G0122200 PROTEIN 48 1029 IPR051809 -
Tan08g2106 1035 Gene3D Ribonuclease Inhibitor 268 338 IPR032675 -
Tan08g2106 1035 Gene3D Ribonuclease Inhibitor 156 267 IPR032675 -
Tan08g2106 1035 Pfam Leucine rich repeat 424 483 IPR001611 GO:0005515(InterPro)
Tan08g2106 1035 Pfam Leucine rich repeat 545 604 IPR001611 GO:0005515(InterPro)
Tan08g2106 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2106 1035 SUPERFAMILY L domain-like 35 332 - -
Tan08g2106 1035 Gene3D Phosphorylase Kinase; domain 1 673 793 - -
Tan08g2106 1035 PRINTS Leucine-rich repeat signature 473 486 - -
Tan08g2106 1035 PRINTS Leucine-rich repeat signature 567 580 - -
Tan08g2106 1035 SMART serkin_6 712 978 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2106 1035 SMART LRR_typ_2 446 470 IPR003591 -
Tan08g2106 1035 SMART LRR_typ_2 126 150 IPR003591 -
Tan08g2106 1035 SMART LRR_typ_2 591 616 IPR003591 -
Tan08g2106 1035 SMART LRR_typ_2 567 590 IPR003591 -
Tan08g2106 1035 SMART LRR_typ_2 422 445 IPR003591 -
Tan08g2106 1035 SMART LRR_typ_2 519 543 IPR003591 -
Tan08g2106 1035 SMART LRR_typ_2 174 198 IPR003591 -
Tan08g2106 1035 SMART LRR_typ_2 471 494 IPR003591 -
Tan08g2106 1035 SMART LRR_typ_2 246 270 IPR003591 -
Tan08g2106 1035 FunFam LRR receptor-like serine/threonine-protein kinase EFR 682 793 - -
Tan08g2106 1035 FunFam LRR receptor-like serine/threonine-protein kinase EFR 343 646 - -
Tan08g2106 1035 Gene3D Ribonuclease Inhibitor 37 154 IPR032675 -
Tan08g2106 1035 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 794 1035 - -
Tan08g2106 1035 SUPERFAMILY L domain-like 375 630 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1769 Tan-Chr2:82075838 Tan08g2106 Tan-Chr8:73032044 3.60E-86 dispersed
Tan08g2106 Tan-Chr8:73032044 Tan08g2109 Tan-Chr8:73048703 1.90E-208 dispersed
Tan08g2106 Tan-Chr8:73032044 Tan08g2107 Tan-Chr8:73037297 2.10E-268 tandem
Tan03g2669 Tan-Chr3:79738680 Tan08g2106 Tan-Chr8:73032044 3.10E-50 transposed
Tan04g2491 Tan-Chr4:83754803 Tan08g2106 Tan-Chr8:73032044 1.40E-65 transposed
Tan05g2512 Tan-Chr5:76478446 Tan08g2106 Tan-Chr8:73032044 1.70E-11 transposed
Tan11g0274 Tan-Chr11:2152098 Tan08g2106 Tan-Chr8:73032044 1.70E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67975 PF00069 Pkinase 1.80E-38 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2106 - - - 0.0