Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2107 ATGCGGCACAATTGCAGCAATATCAATAGGATTCTGTATGCATTTCTATGTGATATCTTTCTGATATCCATGAGCTCAGCTTTTAGGAATATTCCGACCGTTGGAAATGAATCGGATCGTTTGGCTCTACTTGACTTGAAAGGTAGAACCTTGAACGACCCACTCAGAATCATGAACTCTTGGAATGATTCTACACATTTTTGCGATTGGGTTGGTGTTACTTGCAACACCACTGTTGAAAGAGTGTTGGTTTTGAACTTGGAAGCTCGAGATCTGACTGGTTCGATACCGTCTTCTTTGGGAAATCTTACTCATCTCACTGAACTCAGATTGGGAGACAACAACTTCCATGGCCGAATTCCCCAAGAGTTTGGTCAGTTACTACAACTGCTCCATCTCAACTTATCCTTCAATAACTTCAATGGCGAGATTCCGATGAATATTAGTCATTGTACTGAGCTGCTTGTTTTGGAGTTGAGTATCAATGGGCTTGTGGGTAAGATTCCACACCAGTTCTTCACATTAACCAAGTTGGAACGACTCGGGTTCGGCGGTAACAATCTGACTGGTATTATCCCACCTTGGATAGCAAATTTTTCTTCCATATTTGCTCTGTCATTTGCACAGAACAATTTTCAGGGGAATATTCCTAGTGAACTAGGACGCCTATCTAGATTGAAATTCTTCAGCGTTTATGGTAACTATTTAACAGGTATAGTACCGCCTTCGATCTATAATATAACTTCTCTTACTTACTTTTCTCTTACTCAAAATCGACTTCAAGGAGCTCTACCACCAAATGTTGGACTTACTCTGCCCAATCTTAGAATCTTTGCTGGTGGTGTCAATAATTTCGGAGGGCCTATTCCGACATCCTTGGCTAATATCTCTGGCCTTCAGGTCTTGGATTTTGCTGAAAATGGTCTCACTGGAATTCTACCTAATGACTTGGGGATGTTAAAAGACTTGGTGAGACTCAATTTTGATGACAACAAACTTGGAAGTGGGAAAGTTGGTGACTTAAATATAATGAGGTCCTTGACTAATTGTACTAGTTTAAGCATTTTGGGTCTTGCTGGAAATCGTTTTGGAGGAGTATTGCCTCCATCTATTTGCAACCTTTCAAACCAGTTGACAATTCTAACCTTAGGTAGAAATATGTTAAGTGGAGGCATTCCTCTAGGGATTGAAAACTTGATTAACTTACAAGTTCTTGGAGTAGAAAGTAACTATCTGAATGGTAGTATCCCTCCCAATATTGGGAAACTTCAGAATTTGGCCATTCTTAATTTGAATGGTAACAAGTTAACTGGGCCAGTGCCATCCTCTATTGGTAACTTATCTTTAGTGACCAAGCTTTTCATGGAGGATAATAGACTTGAGGGAAGTATACCACCAAACTTGGGACAATGCAAAAGCCTCCAAGTTCTTGATCTATCTGGTAATAGCCTAAGTGGTATCATACCTAAGGAAGTTCTTAGTATCTCTTCCCTTTCAATTTATTTGGCCTTGAACCACAACTCACTTACTGGGCCATTGCCGTCTGAAGTGGGCAAGTTAGTTAGTTTGACGCTATTGGATGTATCAGAGAATGAATTGTCAGGTGATATTCCCACCAGCCTTGGTAAATGTATTAGCATGGAGCATTTGTATTTGGGGGGTAACCGATTTGAGGGAACAATTCCTCAATCTTTCGAAGCTTTGAAAGGTTTAGAAGAACTAAATCTCTCAAGTAATAATTTGTCTGGGCCAATTCCTCAATTTCTTGGCAAGCTTCTTTCGCTCAAGCATCTTAATGTATCCTATAATAATTTTGAGGGAAAAGTGCCCAAAGATGGGGTTTTTTCCAATTCAACCATGATTTCCATTCTTGGAAACGATAAACTATGTGATGGTCTGCAAGAATTACATTTACCTTCATGCACACCTAATGAAGCACATTTATCCTACAATTTTCTCTCACCAAATTTGTTAATCCCCATAGTATCTGCTCTATTTTTAGTTCTTCTTTTGAGCATCCTTTTTGGGTGTCTTATGCTGAAGAAGTCAAGGAAGAAGGCATTATCTTCAGCTTCCTCCCAGGATTTACTATCACAAGTTTCTTACTTAGAACTCAGTAAATCAACTAATGGGTTCTCCATGGACAATTTGATTGGTTCAGGTAGTTTCGGTTCTGTGTATAAAGGTATTTTTACGAATGATGGATCGATTGTTGCTATTAAGGTACTAAACCTTCATCAACGAGGTGCTTCCAGTAGTTTTTTTAATGAATGTAAAGCTCTCACAAGTATACGACATCGGAATCTCCTGAAGATCATTACCTCTTGCTCGAGTACAAATGAACAAGGTGATGAATTCAAGGCTCTAGTCTTTGATTTCATGTCCAATGGAAACTTGGATTATTGGCTTCACTCTACACATCTTGGTAAGAATCAAAGAAGGCTAAGCATTATCCAGAGATTGAACATTGCTATCGATATCGCCAATGCATTAGATTATCTCCATAATCATTGTGAATCACCCATTGTTCATTGTGATCTAAAGCCTAGCAATGTATTGCTCGACGATGATATGGTAGCTCACGTTGGCGACTTCGGGTTAGCTAGATTCATCTTGGAAGGATCAAGCCAATCCTGTTTTAGACAAACTCTGTCACTTGCACTTAAGGGCTCTATTGGATATATCCCTCCAGAGTATGGTACTGGTGGCAAAATTTCCATGGAAGGAGATATCTTCAGCTATGGAATTTTATTGTTGGAGATGATCCTTGGAAAAAGACCTACTGATGACAGTTTTGGTGATGGTGTAGACATTCGTTTGTTTACTGCAATGGCATTGCCTCACCATGCCCTTGACATAATTGACCATTCTCTACTATGTGAAAAAACACACCAACAAGAACAAGAGAACGAAGACAAAATACAAGAAATAGCGATGATGGGTGAAGAACATCCTGAAGAAGTCGAGCAAAAAATAATGGAAGAATGTTCAGTCTCAATATTAGGAATTGGTCTATCATGCTCCTCAACAACACCAAGATTGAGGATGCCCATGAATGTCGTCGTTAATGAATTGCAAGCCATTAGAAGCTCCTATCTAAAGTTTAAGAAGGCAAGCTAA 3120 39.29 MRHNCSNINRILYAFLCDIFLISMSSAFRNIPTVGNESDRLALLDLKGRTLNDPLRIMNSWNDSTHFCDWVGVTCNTTVERVLVLNLEARDLTGSIPSSLGNLTHLTELRLGDNNFHGRIPQEFGQLLQLLHLNLSFNNFNGEIPMNISHCTELLVLELSINGLVGKIPHQFFTLTKLERLGFGGNNLTGIIPPWIANFSSIFALSFAQNNFQGNIPSELGRLSRLKFFSVYGNYLTGIVPPSIYNITSLTYFSLTQNRLQGALPPNVGLTLPNLRIFAGGVNNFGGPIPTSLANISGLQVLDFAENGLTGILPNDLGMLKDLVRLNFDDNKLGSGKVGDLNIMRSLTNCTSLSILGLAGNRFGGVLPPSICNLSNQLTILTLGRNMLSGGIPLGIENLINLQVLGVESNYLNGSIPPNIGKLQNLAILNLNGNKLTGPVPSSIGNLSLVTKLFMEDNRLEGSIPPNLGQCKSLQVLDLSGNSLSGIIPKEVLSISSLSIYLALNHNSLTGPLPSEVGKLVSLTLLDVSENELSGDIPTSLGKCISMEHLYLGGNRFEGTIPQSFEALKGLEELNLSSNNLSGPIPQFLGKLLSLKHLNVSYNNFEGKVPKDGVFSNSTMISILGNDKLCDGLQELHLPSCTPNEAHLSYNFLSPNLLIPIVSALFLVLLLSILFGCLMLKKSRKKALSSASSQDLLSQVSYLELSKSTNGFSMDNLIGSGSFGSVYKGIFTNDGSIVAIKVLNLHQRGASSSFFNECKALTSIRHRNLLKIITSCSSTNEQGDEFKALVFDFMSNGNLDYWLHSTHLGKNQRRLSIIQRLNIAIDIANALDYLHNHCESPIVHCDLKPSNVLLDDDMVAHVGDFGLARFILEGSSQSCFRQTLSLALKGSIGYIPPEYGTGGKISMEGDIFSYGILLLEMILGKRPTDDSFGDGVDIRLFTAMALPHHALDIIDHSLLCEKTHQQEQENEDKIQEIAMMGEEHPEEVEQKIMEECSVSILGIGLSCSSTTPRLRMPMNVVVNELQAIRSSYLKFKKAS 1039
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 73037297 73040967 + Tan0016349.2 Tan08g2107 761999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2107 1039 PRINTS Leucine-rich repeat signature 568 581 - -
Tan08g2107 1039 PRINTS Leucine-rich repeat signature 474 487 - -
Tan08g2107 1039 SUPERFAMILY L domain-like 377 631 - -
Tan08g2107 1039 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524(InterPro)
Tan08g2107 1039 Pfam Protein kinase domain 714 933 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2107 1039 FunFam LRR receptor-like serine/threonine-protein kinase EFR 682 793 - -
Tan08g2107 1039 Gene3D Ribonuclease Inhibitor 157 269 IPR032675 -
Tan08g2107 1039 Gene3D Transferase(Phosphotransferase) domain 1 794 1038 - -
Tan08g2107 1039 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 794 1038 - -
Tan08g2107 1039 PANTHER OS04G0122200 PROTEIN 50 1028 IPR051809 -
Tan08g2107 1039 Pfam Leucine Rich Repeat 352 374 IPR001611 GO:0005515(InterPro)
Tan08g2107 1039 Pfam Leucine Rich Repeat 473 491 IPR001611 GO:0005515(InterPro)
Tan08g2107 1039 Pfam Leucine Rich Repeat 177 199 IPR001611 GO:0005515(InterPro)
Tan08g2107 1039 Pfam Leucine Rich Repeat 299 319 IPR001611 GO:0005515(InterPro)
Tan08g2107 1039 Pfam Leucine Rich Repeat 522 544 IPR001611 GO:0005515(InterPro)
Tan08g2107 1039 Pfam Leucine Rich Repeat 130 151 IPR001611 GO:0005515(InterPro)
Tan08g2107 1039 Pfam Leucine Rich Repeat 425 447 IPR001611 GO:0005515(InterPro)
Tan08g2107 1039 Pfam Leucine Rich Repeat 105 127 IPR001611 GO:0005515(InterPro)
Tan08g2107 1039 FunFam LRR receptor-like serine/threonine-protein kinase EFR 344 647 - -
Tan08g2107 1039 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 76 343 - -
Tan08g2107 1039 Gene3D Ribonuclease Inhibitor 38 153 IPR032675 -
Tan08g2107 1039 Gene3D Ribonuclease Inhibitor 270 340 IPR032675 -
Tan08g2107 1039 SMART LRR_typ_2 296 319 IPR003591 -
Tan08g2107 1039 SMART LRR_typ_2 568 591 IPR003591 -
Tan08g2107 1039 SMART LRR_typ_2 175 198 IPR003591 -
Tan08g2107 1039 SMART LRR_typ_2 592 617 IPR003591 -
Tan08g2107 1039 SMART LRR_typ_2 520 544 IPR003591 -
Tan08g2107 1039 SMART LRR_typ_2 447 471 IPR003591 -
Tan08g2107 1039 SMART LRR_typ_2 127 151 IPR003591 -
Tan08g2107 1039 SMART LRR_typ_2 399 423 IPR003591 -
Tan08g2107 1039 SMART LRR_typ_2 103 126 IPR003591 -
Tan08g2107 1039 Gene3D Ribonuclease Inhibitor 341 645 IPR032675 -
Tan08g2107 1039 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Tan08g2107 1039 SUPERFAMILY Protein kinase-like (PK-like) 687 1025 IPR011009 -
Tan08g2107 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2107 1039 Gene3D Phosphorylase Kinase; domain 1 676 793 - -
Tan08g2107 1039 ProSiteProfiles Protein kinase domain profile. 712 1033 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2107 1039 SMART serkin_6 712 1033 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2107 1039 SUPERFAMILY L domain-like 58 376 - -
Tan08g2107 1039 ProSiteProfiles Leucine-rich repeat profile. 473 494 IPR001611 GO:0005515(InterPro)
Tan08g2107 1039 Pfam Leucine rich repeat 547 605 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g2107 Tan-Chr8:73037297 Tan08g2110 Tan-Chr8:73058721 8.40E-209 dispersed
Tan08g2106 Tan-Chr8:73032044 Tan08g2107 Tan-Chr8:73037297 2.10E-268 tandem
Tan08g2107 Tan-Chr8:73037297 Tan08g2108 Tan-Chr8:73037475 1.10E-155 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67976 PF00069 Pkinase 8.20E-40 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2107 - - - 0.0