Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2110 ATGTGGCACGATTACTACAATGCCAAGAATTACATCCTGTCTATATTATTATTTCTCTGCCATATCTTTCATATGATGCCCATGATCTCAGCTTCTGCAAGTATAAACAATGGAGATAAATCAGATCGTTTGGCTCTACTTGACTTGAAAAGTAGTGTACTCAACGACCCACTCAAAATTATGAGTTCTTGGAACGATTCTATTCATTTCTGTAACTGGGTTGGTGTTACTTGCAATTCCACCACTAGAAGAGTAGCGGTTTTGGATTTGGAAGCTCGGAATCTAACTGGTACGATACCGCTTACTTTGGGAAACTTGACTTATCTCACTGAAATTCGACTGGGAGACAACAACTTCCATGGCGGAATCCCCCAAGAGTTTGGTCGGCTACTACGATTGCGTCATCTTAATTTGTCTCACAATGGCTTCCACGGTGAGATTCCGGCGAATATAAGTCATTGCACTGAGCTTCTGGTTTTGAGACTTGACGGCAACAAGCTTGAAGGTCATATTCCAAACGAGTTGTTCACGTTAACCAAGTTGAATAGACTCAGATGTGACGATAACAATCTGATCGGAGCTATCCCATCTTGGGTAGCAAATTTTTCGTCCCTGTCTTATTTCACACTTTCTCAGAACAATTTTCAAGGAGGCATTCCCAGTGAACTCGGGCGCTTATCAAGATTAACATTCTTGGACGTATATCAGAACGATTTAACAGGTAAAGTGCCCCTTTCAATCTATAATATAACTTCTCTGCTTGATTTGGCACTTACTCAAAATCAACTTCAAGGGTTTTTGCCACTGAGTATTGGATTTACTCTTCCCAATCTTAGGTCCTTTTATGGTGGTATGAATAATTTTAGTGGGTCTATTCCCACGTCTTTTGCTAACATGTCTAATCTTCGAACGTTAGATTTATCTGAAAATAGTCTCACTGGAATGCTACCTCATGACTTGGGGAGCTTAGAACACTTGCAGATACTCAATTTTGAAAACAACAGACTTGGGACTGAGAAAATTGGTGACTTAGATTTTATCAATTCCTTGGTTAATTGTACTAGTCTATTCGATTTGGGTCTAGGAATGAATCATCTTGGAGGAACATTGCCACCAACTTTAGGGAACCTTTCAAACCAATTGACAAGGCTAACATTGGGTGAAAATATGTTAAGTGGAAGCATTCCTAGTGGAATTGAAAATCTGATTAACTTGCAAATTCTTGGAATGGAATATAACTATCTGAATGGTAGTATCCCTCAAAACATTGGGAAGCTTCAAAACTTGGCGTTGTTGTATTTGAACAATAACGAATTAACTGGGACAATTCCATCCTCCATTGGTAACCTATCTTCTGTCGTTAAGCTTTTCATGGACAAAAATAGACTTGAGGGAAGTATACCACCAAGTTTAGGACAATGCAAAAGCCTACAAGTTCTTGACTTATCTCAGAACAACCTAAGCGGCTGCATACCCAAGGAAATTCTTGGTCTCTCTTCACTTTCAATATCTTTGAACTTGAATAATAACTCACTTACTGGTCCATTATCCTCTGAAGTGGGTCAATTAGTTAACTTAGCACTATTTGATGTATCAGAGAACAAATTATCAGGTAATATACCCAGCAATCTTGGTAAATGTATTAGCATGGAACGCTTGTATTTTAGGGCTAACCGATTCGAGGGAACAATTCCTCAATCTTTGGAAGATTTGAAAGGTCTAGAGGAATTGAATCTCTCAAACAACAACTTGTCTGGATCAATTCCTCTGTTTCTTGGCAAGCTTTCTTCACTCAAATATTTGGATCTATCCTATAATAACTTTGAGGGAAAAGTGCCAAAAGAAGGAGTTTTTTCCAATTCAACCATGATTTCCATCCTTGGGAATAACAATCTATGTGGTGGTTTACAAGTATTACACTTGCCTCCCTGCCCATCTAACCCAACAATACATTCACCCAAAAAGTTTCTATCACCAAAGGTGTTAATCCCTGTATCTACAGTCATATTTGCCATTGTTCTATCAAGCATCATTTTTGTGTGTTTTCTGCTCAAGAAGTCAAGGAAGGATGCTTCAACTTCATCTTCATCTTCTGCCAAGGATTTTTTACCACAGATTTCTTACTCAGAGTTGAGTAAATCAACAGATGGATTCTCTATGGACAATTTAATTGGTTCAGGCAGTTTTGGAAATGTGTATAAAGGCGTTCTTTCAAATGATGGATCAATTGTTGCCATTAAAGTTCTAAACCTCCAACAACAAGGCGCTTCTAGGAGTTTTATTGATGAATGCAACACTCTGTCAAATATACGACATCGAAATCTCCTCAAGATCATCACTTGTTGCTCAAGTATTGACATACAAGGCAATGAATTTAAAGCTTTGGTCTTCAATTTCATGTCCAATGGAAATTTGGACAGTTGGATTCACCCTGCTGATCCAGAAGACAATCAAAGAAGGTTAAGCCTCATCCAGAGATTGAATATTGCTATTGATATTGCATGTGGACTAGATTATCTCCATAATCATTGTGAAACTCCTATTATTCATTGTGATCTAAAGCCTAGCAATATATTGCTCGACGACGATATGGTAGCTCATGTAGGAGACTTTGGGTTAGCTAGATTCATGTTGGAAGGATCAAATGATCAAACATCTTTCAGTCAAACCATGTCACTTGCACTGAAGGGTTCTGTTGGATATATCCCTCCAGAGTATGGCACTGGCAGTAGAATTTCCATTGAAGGAGATATCTTCAGTTACGGAATACTACTATTAGAGATGATGATTGGAAAAAGACCCACTGACGACATGTTTTGTGATGGCATGAATATTCATTTGTTTACAGCAATGGCGTTACCTCAAGATGCTTTGAACATTGTGGAATCCTCTTTGCTATTCGAAGAAACATGTCAACAAGAAGAAGAAAATGAAGGGATAATACAAGAAAGAAGAATATTGGGTGAGGAAGACGGTAGAGAAATGGTGCTAAAATGGATAGAAGAATGTCTAGTCTCTGTAATGAGAATTGGCTTGTCATGCTCCTTGATGACAACACCTAAAGAGAGAACATCCATGAATGTTGTCGCTAATGAATTGCAAGCAATTAGAAGCTCCTATCTCAAGTTTAAGAAGGCAAATGGAAAGTTCAACCCAAACTTGAGAGGCGAAGGACTGTATTTGGCCAAATAA 3192 38.31 MWHDYYNAKNYILSILLFLCHIFHMMPMISASASINNGDKSDRLALLDLKSSVLNDPLKIMSSWNDSIHFCNWVGVTCNSTTRRVAVLDLEARNLTGTIPLTLGNLTYLTEIRLGDNNFHGGIPQEFGRLLRLRHLNLSHNGFHGEIPANISHCTELLVLRLDGNKLEGHIPNELFTLTKLNRLRCDDNNLIGAIPSWVANFSSLSYFTLSQNNFQGGIPSELGRLSRLTFLDVYQNDLTGKVPLSIYNITSLLDLALTQNQLQGFLPLSIGFTLPNLRSFYGGMNNFSGSIPTSFANMSNLRTLDLSENSLTGMLPHDLGSLEHLQILNFENNRLGTEKIGDLDFINSLVNCTSLFDLGLGMNHLGGTLPPTLGNLSNQLTRLTLGENMLSGSIPSGIENLINLQILGMEYNYLNGSIPQNIGKLQNLALLYLNNNELTGTIPSSIGNLSSVVKLFMDKNRLEGSIPPSLGQCKSLQVLDLSQNNLSGCIPKEILGLSSLSISLNLNNNSLTGPLSSEVGQLVNLALFDVSENKLSGNIPSNLGKCISMERLYFRANRFEGTIPQSLEDLKGLEELNLSNNNLSGSIPLFLGKLSSLKYLDLSYNNFEGKVPKEGVFSNSTMISILGNNNLCGGLQVLHLPPCPSNPTIHSPKKFLSPKVLIPVSTVIFAIVLSSIIFVCFLLKKSRKDASTSSSSSAKDFLPQISYSELSKSTDGFSMDNLIGSGSFGNVYKGVLSNDGSIVAIKVLNLQQQGASRSFIDECNTLSNIRHRNLLKIITCCSSIDIQGNEFKALVFNFMSNGNLDSWIHPADPEDNQRRLSLIQRLNIAIDIACGLDYLHNHCETPIIHCDLKPSNILLDDDMVAHVGDFGLARFMLEGSNDQTSFSQTMSLALKGSVGYIPPEYGTGSRISIEGDIFSYGILLLEMMIGKRPTDDMFCDGMNIHLFTAMALPQDALNIVESSLLFEETCQQEEENEGIIQERRILGEEDGREMVLKWIEECLVSVMRIGLSCSLMTTPKERTSMNVVANELQAIRSSYLKFKKANGKFNPNLRGEGLYLAK 1063
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 73058721 73062221 + Tan0005520.1 Tan08g2110 762002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2110 1063 Pfam Protein kinase domain 720 937 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2110 1063 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 39 194 - -
Tan08g2110 1063 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Tan08g2110 1063 SMART serkin_6 718 1041 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2110 1063 SUPERFAMILY L domain-like 380 634 - -
Tan08g2110 1063 PANTHER OS04G0122200 PROTEIN 52 1036 IPR051809 -
Tan08g2110 1063 Pfam Leucine Rich Repeat 132 154 IPR001611 GO:0005515(InterPro)
Tan08g2110 1063 Pfam Leucine Rich Repeat 428 450 IPR001611 GO:0005515(InterPro)
Tan08g2110 1063 Pfam Leucine Rich Repeat 476 497 IPR001611 GO:0005515(InterPro)
Tan08g2110 1063 Pfam Leucine Rich Repeat 204 226 IPR001611 GO:0005515(InterPro)
Tan08g2110 1063 Pfam Leucine Rich Repeat 380 402 IPR001611 GO:0005515(InterPro)
Tan08g2110 1063 PRINTS Leucine-rich repeat signature 571 584 - -
Tan08g2110 1063 PRINTS Leucine-rich repeat signature 302 315 - -
Tan08g2110 1063 FunFam LRR receptor-like serine/threonine-protein kinase EFR 342 649 - -
Tan08g2110 1063 Gene3D Ribonuclease Inhibitor 345 646 IPR032675 -
Tan08g2110 1063 SMART LRR_typ_2 426 450 IPR003591 -
Tan08g2110 1063 SMART LRR_typ_2 299 322 IPR003591 -
Tan08g2110 1063 SMART LRR_typ_2 523 547 IPR003591 -
Tan08g2110 1063 SMART LRR_typ_2 155 178 IPR003591 -
Tan08g2110 1063 SMART LRR_typ_2 323 348 IPR003591 -
Tan08g2110 1063 SMART LRR_typ_2 571 593 IPR003591 -
Tan08g2110 1063 SMART LRR_typ_2 130 154 IPR003591 -
Tan08g2110 1063 SMART LRR_typ_2 474 498 IPR003591 -
Tan08g2110 1063 SMART LRR_typ_2 595 620 IPR003591 -
Tan08g2110 1063 Gene3D Ribonuclease Inhibitor 279 344 IPR032675 -
Tan08g2110 1063 Gene3D Phosphorylase Kinase; domain 1 679 799 - -
Tan08g2110 1063 ProSiteProfiles Protein kinase domain profile. 718 1041 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2110 1063 FunFam Leucine-rich repeat protein kinase family protein 197 341 - -
Tan08g2110 1063 SUPERFAMILY L domain-like 41 336 - -
Tan08g2110 1063 Gene3D Ribonuclease Inhibitor 39 188 IPR032675 -
Tan08g2110 1063 Gene3D Ribonuclease Inhibitor 189 278 IPR032675 -
Tan08g2110 1063 SUPERFAMILY Protein kinase-like (PK-like) 692 954 IPR011009 -
Tan08g2110 1063 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 800 1046 - -
Tan08g2110 1063 Pfam Leucine rich repeat 286 336 IPR001611 GO:0005515(InterPro)
Tan08g2110 1063 Pfam Leucine rich repeat 550 608 IPR001611 GO:0005515(InterPro)
Tan08g2110 1063 FunFam LRR receptor-like serine/threonine-protein kinase EFR 689 799 - -
Tan08g2110 1063 ProSitePatterns Serine/Threonine protein kinases active-site signature. 848 860 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2110 1063 ProSitePatterns Protein kinases ATP-binding region signature. 724 747 IPR017441 GO:0005524(InterPro)
Tan08g2110 1063 Gene3D Transferase(Phosphotransferase) domain 1 800 1051 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2512 Tan-Chr5:76478446 Tan08g2110 Tan-Chr8:73058721 9.90E-73 dispersed
Tan08g2107 Tan-Chr8:73037297 Tan08g2110 Tan-Chr8:73058721 8.40E-209 dispersed
Tan08g2108 Tan-Chr8:73037475 Tan08g2110 Tan-Chr8:73058721 6.60E-77 dispersed
Tan08g2110 Tan-Chr8:73058721 Tan11g0275 Tan-Chr11:2161536 2.50E-91 dispersed
Tan08g2109 Tan-Chr8:73048703 Tan08g2110 Tan-Chr8:73058721 1.00E-206 tandem
Tan08g2110 Tan-Chr8:73058721 Tan08g2111 Tan-Chr8:73067102 4.00E-214 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67979 PF00069 Pkinase 1.50E-40 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2110 - - - 0.0