Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2119 ATGGCTTCTTGTTGCTTTGCAATCCTGAATTGCTGTAGAGGAAATAGCAGCTCCGAGGAGCCGGCAGAAGGGCTTGCTGTTACCAACAATGTGCGCATATTTTCTTATAATTCACTGAGGTCAGCAACTAGTAATTTTCATCCATCAAGCAGAATAGGTGCCGGAGGTTATGGAGTTGTCTACAAAGGGGTTTTAAGGGATGGTACCAATGTTGCAGTCAAATCACTGTCTGCAGAATCAGCTCAGGGAACTCGTGAATTCTTAACCGAGATAAATATGATATCAAATATAAGACATCAAAACCTCGTTGAACTGATTGGTTGTTGCGTTGAAGGCACTCATCGAATTTTGGTGTATGAATACCTAGAGAACAACAGCCTTGCGAGTACTTTGCTTGGTTCAATGAGTAAGCATGCCATTCTGGATTGGCCAAAGAGAGCTAAGATTTGTCTTGGTACAGCTCTTGGTCTTGCATTTCTACATGAGGAAGCTGAACTGTCTGTTGTTCATAGAGATATCAAGGCTAGTAATATACTTCTTGACAGAAATTTTCATCCTAAAATAGGAGACTTTGGGTTGGCTAAACTTTTCCCAGACAACGTTACTCATGTTAGTACTCGAGTGGCCGGAACTGTTGGATATTTGGCCCCTGAGTATGCACTTTTAGGACAGCTGACGAAGAAGGCAGATGTATATAGTTTTGGTGTGCTCATGCTGGAAGTAATTAGTGGAAATAGCAGCAGTAAAGCAGCATTCGGAGAAGAGTTGTCGATTCTCGTGGAATGGACTTGGAGATTAAGACAAGAAGGACGGCTTGTAGAACTCATTGATCCAGAATTGATCGAATATCCAAAAGCTGAGGTGATTCGTTTCATTACAGTTGCACTCTTCTGTACCCAAGCAGCTGCAAATCAAAGACCAACCATGAAGCAAGTTGTGGAAATGCTTTCAAGAGAAGTACACCTCAACGAGAAACTATTGACAGAGCCAGGAGTATATAAAGGACACAAAATTAGAAAGTTTAATGGTGGTGCTGCTAGTTCAGAGGGATCATCATCCTCCCATAGAGACAAAGGTAAGAAAGCTATGAAGTCTTCTGCATCTTCTCCCCAATTTAATAGCGCAAATAGTCTGACCCAAATGCTTCCTAGGTGA 1155 41.9 MASCCFAILNCCRGNSSSEEPAEGLAVTNNVRIFSYNSLRSATSNFHPSSRIGAGGYGVVYKGVLRDGTNVAVKSLSAESAQGTREFLTEINMISNIRHQNLVELIGCCVEGTHRILVYEYLENNSLASTLLGSMSKHAILDWPKRAKICLGTALGLAFLHEEAELSVVHRDIKASNILLDRNFHPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEVISGNSSSKAAFGEELSILVEWTWRLRQEGRLVELIDPELIEYPKAEVIRFITVALFCTQAAANQRPTMKQVVEMLSREVHLNEKLLTEPGVYKGHKIRKFNGGAASSEGSSSSHRDKGKKAMKSSASSPQFNSANSLTQMLPR 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 73093997 73097698 - Tan0014347.4 Tan08g2119 762011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2119 384 Pfam Protein tyrosine and serine/threonine kinase 50 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2119 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2119 384 FunFam cold-responsive protein kinase 1 16 121 - -
Tan08g2119 384 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524(InterPro)
Tan08g2119 384 MobiDBLite consensus disorder prediction 364 384 - -
Tan08g2119 384 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 20 354 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Tan08g2119 384 SMART serkin_6 46 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2119 384 ProSiteProfiles Protein kinase domain profile. 46 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2119 384 SUPERFAMILY Protein kinase-like (PK-like) 26 316 IPR011009 -
Tan08g2119 384 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 328 - -
Tan08g2119 384 Gene3D Phosphorylase Kinase; domain 1 17 121 - -
Tan08g2119 384 Gene3D Transferase(Phosphotransferase) domain 1 122 329 - -
Tan08g2119 384 MobiDBLite consensus disorder prediction 343 384 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g2116 Tan-Chr8:73093997 Tan08g2119 Tan-Chr8:73093997 5.30E-217 dispersed
Tan08g2117 Tan-Chr8:73093997 Tan08g2119 Tan-Chr8:73093997 5.30E-217 dispersed
Tan08g2119 Tan-Chr8:73093997 Tan09g1760 Tan-Chr9:69133213 6.70E-79 dispersed
Tan08g2118 Tan-Chr8:73093997 Tan08g2119 Tan-Chr8:73093997 5.70E-163 tandem
Tan08g2119 Tan-Chr8:73093997 Tan08g2120 Tan-Chr8:73093997 8.90E-148 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67984 PF07714 PK_Tyr_Ser-Thr 3.50E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2119 - - - 0.0