Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2142 ATGGAAGGCCACCATCCTCATCCCCTTGTTCAGCTCCACCTTCAGCAACAGCAACAGCAACAGCTTCAACATCCGCCACCACATCTCCACCAGAACCTCGCCGTCGCCGCCGATCAAACCGCTGCCAACGCCGCCGCCGCCGCCGACAGATTCCCTCAATGGAGTATTCAGGAAACAAAGGAGTTTTTGATGATCAGAGCCGAGCTCGATCAGACTTTCATGGAGACCAAACGAAACAAACTCTTGTGGGAAATCACCGCTTCCAAAATGAAGGAAAAGGGTTTCAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTTACCCGTTATAAGGGTTGTGAAACAATGGAGCCAGAAATGTCAAGGCAGCAATTTCCATTCTACACAGAACTACAAGCAATTTTTGGAGCAAGAATGCAACGAATATTATGGGCGGAGGCGGAGAGTGGCGGGAGCGGATCGAAGAAAAAGACGATGGCATTATCGTCCGACGAGGACGAAGAGAACGAGGACAGCGACGGAGACGGAGGCGACATGAAAGTCAGTAGTAAGAAGAGGAAGAAAGGTAAAAGCAGCGTCGGAGCCACCGCGGGCGGTGGCAACGGCGGGGGGAGCAGTAGTATCAATCATTTGAAAGAAATATTAGAAGATTTCATGAACCAACAAATGCAAATGGAGATTCAATGGAGGGAGGCATTTGAAGCAAGGGAAAAAGAGAGACAAATTAGGGAAATGGAGTGGAGAAGGAACATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGGTGGAGAGAAAGAGAAGAACAAAGAAGAATGAGAGAGGAAGTTAGGGCTGAGAAAAGAGATGCTTTAATCACAGCTTTGTTAAACAAGCTAAGAAGAGATGATCATATGTAG 912 47.15 MEGHHPHPLVQLHLQQQQQQQLQHPPPHLHQNLAVAADQTAANAAAAADRFPQWSIQETKEFLMIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEMSRQQFPFYTELQAIFGARMQRILWAEAESGGSGSKKKTMALSSDEDEENEDSDGDGGDMKVSSKKRKKGKSSVGATAGGGNGGGSSSINHLKEILEDFMNQQMQMEIQWREAFEAREKERQIREMEWRRNMEALEHERIMLERRWREREEQRRMREEVRAEKRDALITALLNKLRRDDHM 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 73289753 73291115 + Tan0019372.1 Tan08g2142 762034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2142 303 PANTHER FI21293P1 25 299 - -
Tan08g2142 303 MobiDBLite consensus disorder prediction 151 211 - -
Tan08g2142 303 CDD GT1 52 117 - -
Tan08g2142 303 Pfam Myb/SANT-like DNA-binding domain 53 137 IPR044822 -
Tan08g2142 303 FunFam Zinc finger and SCAN domain-containing 20 54 115 - -
Tan08g2142 303 Gene3D - 54 115 - -
Tan08g2142 303 ProSiteProfiles Myb-like domain profile. 54 110 IPR001005 -
Tan08g2142 303 Coils Coil 247 274 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1046 Tan-Chr1:10262435 Tan08g2142 Tan-Chr8:73289753 4.20E-22 transposed
Tan03g0783 Tan-Chr3:63897920 Tan08g2142 Tan-Chr8:73289753 1.90E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28241 PF13837 Myb_DNA-bind_4 1.90E-18 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2142 - - - 0.0